RNA–Protein interactions for RNA: ENST00000494016.1

CPSF7-213, Transcript of cleavage and polyadenylation specific factor 7, humanhuman

TSL 2

Gene CPSF7, Length 656 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF7-213ENST00000494016 JMJD7-PLA2G4BH0Y9G9 81 aa3.82□□□□□ -1.8
CPSF7-213ENST00000494016 RPS28P62857 69 aaKnown RBP3.82□□□□□ -1.8
CPSF7-213ENST00000494016 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP3.82□□□□□ -1.8
CPSF7-213ENST00000494016 Q6ZQY7 126 aa3.82□□□□□ -1.8
CPSF7-213ENST00000494016 NOTCH2NLQ7Z3S9 236 aa3.82□□□□□ -1.8
CPSF7-213ENST00000494016 LINC00846Q9NV44 126 aa3.82□□□□□ -1.8
CPSF7-213ENST00000494016 KMT2AQ03164 3969 aa3.82□□□□□ -1.8
CPSF7-213ENST00000494016 IGLV1-50A0A075B6I6 118 aa3.81□□□□□ -1.8
CPSF7-213ENST00000494016 KRTAP4-16G5E9R7 235 aaPredicted RBP3.81□□□□□ -1.8
CPSF7-213ENST00000494016 H3BQ85 93 aa3.81□□□□□ -1.8
CPSF7-213ENST00000494016 UBE2DNLQ8IWF7 75 aa3.81□□□□□ -1.8
CPSF7-213ENST00000494016 DNAH6Q9C0G6 4158 aa3.8□□□□□ -1.8
CPSF7-213ENST00000494016 LOC110117498A0A087WWA1 95 aa3.8□□□□□ -1.8
CPSF7-213ENST00000494016 M0R2N4 97 aa3.8□□□□□ -1.8
CPSF7-213ENST00000494016 NDUFS5O43920 106 aa3.8□□□□□ -1.8
CPSF7-213ENST00000494016 SPRR1AP35321 89 aa3.8□□□□□ -1.8
CPSF7-213ENST00000494016 CNBPP62633 177 aaKnown RBP3.8□□□□□ -1.8
CPSF7-213ENST00000494016 RBM3P98179 157 aaKnown RBP3.8□□□□□ -1.8
CPSF7-213ENST00000494016 Q6ZQT0 140 aa3.8□□□□□ -1.8
CPSF7-213ENST00000494016 NKAPP1Q8N9T2 125 aa3.8□□□□□ -1.8
CPSF7-213ENST00000494016 IMUPQ9GZP8 106 aa3.8□□□□□ -1.8
CPSF7-213ENST00000494016 KIAA1109Q2LD37 5005 aa3.79□□□□□ -1.8
CPSF7-213ENST00000494016 NBDYA0A0U1RRE5 68 aa3.79□□□□□ -1.8
CPSF7-213ENST00000494016 A0A1W2PNN7 141 aa3.79□□□□□ -1.8
CPSF7-213ENST00000494016 LRCOL1A6NCL2 159 aa3.79□□□□□ -1.8
CPSF7-213ENST00000494016 NUPR2A6NF83 97 aa3.79□□□□□ -1.8
CPSF7-213ENST00000494016 RPL37AP8A6NKH3 93 aa3.79□□□□□ -1.8
CPSF7-213ENST00000494016 NDUFV3P56181 108 aaKnown RBP3.79□□□□□ -1.8
CPSF7-213ENST00000494016 LINC01547P58512 204 aaPredicted RBP3.79□□□□□ -1.8
CPSF7-213ENST00000494016 Q6ZRN7 208 aaPredicted RBP3.79□□□□□ -1.8
CPSF7-213ENST00000494016 LAMTOR3Q9UHA4 124 aa3.79□□□□□ -1.8
CPSF7-213ENST00000494016 HECTD4Q9Y4D8 3996 aa3.79□□□□□ -1.8
CPSF7-213ENST00000494016 DNAH2Q9P225 4427 aa3.78□□□□□ -1.8
CPSF7-213ENST00000494016 A0A096LNI7 61 aa3.78□□□□□ -1.8
CPSF7-213ENST00000494016 TRBV7-4A0A0J9YYF1 115 aa3.78□□□□□ -1.8
CPSF7-213ENST00000494016 FAM236DA0A1B0GTK5 79 aa3.78□□□□□ -1.8
CPSF7-213ENST00000494016 C16orf90A8MZG2 172 aa3.78□□□□□ -1.8
CPSF7-213ENST00000494016 C8orf87E5RJ46 101 aa3.78□□□□□ -1.8
CPSF7-213ENST00000494016 H0Y9J4 135 aa3.78□□□□□ -1.8
CPSF7-213ENST00000494016 FAM236CP0DP71 79 aa3.78□□□□□ -1.8
CPSF7-213ENST00000494016 Q6JHZ5 121 aa3.78□□□□□ -1.8
CPSF7-213ENST00000494016 Q8N377 158 aa3.78□□□□□ -1.8
CPSF7-213ENST00000494016 Q9BRP9 147 aa3.78□□□□□ -1.8
CPSF7-213ENST00000494016 KRTAP2-2Q9BYT5 123 aa3.78□□□□□ -1.8
CPSF7-213ENST00000494016 DNAH17Q9UFH2 4485 aa3.77□□□□□ -1.81
CPSF7-213ENST00000494016 IGKV3D-7A0A0C4DH55 119 aa3.77□□□□□ -1.81
CPSF7-213ENST00000494016 PSCAO43653 123 aa3.77□□□□□ -1.81
CPSF7-213ENST00000494016 PDE6GP18545 87 aa3.77□□□□□ -1.81
CPSF7-213ENST00000494016 Q6ZRX8 168 aa3.77□□□□□ -1.81
CPSF7-213ENST00000494016 C9orf163Q8N9P6 203 aa3.77□□□□□ -1.81
CPSF7-213ENST00000494016 IGLV2-33A0A075B6J2 118 aaPredicted RBP3.76□□□□□ -1.81
CPSF7-213ENST00000494016 ERC2-IT1O76042 136 aa3.76□□□□□ -1.81
CPSF7-213ENST00000494016 C14orf177Q52M58 125 aa3.76□□□□□ -1.81
CPSF7-213ENST00000494016 DSCR8Q96T75 97 aa3.76□□□□□ -1.81
CPSF7-213ENST00000494016 DHRS4-AS1Q9P1J3 65 aa3.76□□□□□ -1.81
CPSF7-213ENST00000494016 ETDCA0A1B0GVM5 59 aa3.75□□□□□ -1.81
CPSF7-213ENST00000494016 PSPHP1O15172 72 aa3.75□□□□□ -1.81
CPSF7-213ENST00000494016 HIST1H4AP62805 103 aaKnown RBP3.75□□□□□ -1.81
CPSF7-213ENST00000494016 REG3GQ6UW15 175 aa3.75□□□□□ -1.81
CPSF7-213ENST00000494016 KRTAP11-1Q8IUC1 163 aa3.75□□□□□ -1.81
CPSF7-213ENST00000494016 ST20-AS1Q8NBB2 130 aa3.75□□□□□ -1.81
CPSF7-213ENST00000494016 DEFB105AQ8NG35 78 aa3.75□□□□□ -1.81
CPSF7-213ENST00000494016 ANAPC13Q9BS18 74 aa3.75□□□□□ -1.81
CPSF7-213ENST00000494016 ABCA13Q86UQ4 5058 aa3.75□□□□□ -1.81
CPSF7-213ENST00000494016 FAT2Q9NYQ8 4349 aa3.75□□□□□ -1.81
CPSF7-213ENST00000494016 IGLV5-48A0A075B6I7 105 aa3.74□□□□□ -1.81
CPSF7-213ENST00000494016 IGKV2-24A0A0C4DH68 120 aa3.74□□□□□ -1.81
CPSF7-213ENST00000494016 J3KT08 172 aa3.74□□□□□ -1.81
CPSF7-213ENST00000494016 CHTF8P0CG12 524 aa3.74□□□□□ -1.81
CPSF7-213ENST00000494016 Q6ZR54 194 aa3.74□□□□□ -1.81
CPSF7-213ENST00000494016 OCR1Q9BZK8 76 aa3.74□□□□□ -1.81
CPSF7-213ENST00000494016 SMIM26A0A096LP01 95 aa3.73□□□□□ -1.81
CPSF7-213ENST00000494016 FAM236AA0A1B0GUQ0 79 aa3.73□□□□□ -1.81
CPSF7-213ENST00000494016 FAM236BA0A1B0GV22 79 aa3.73□□□□□ -1.81
CPSF7-213ENST00000494016 EPM2AB3EWF7 344 aa3.73□□□□□ -1.81
CPSF7-213ENST00000494016 CCDC179H3BU77 68 aa3.73□□□□□ -1.81
CPSF7-213ENST00000494016 PANO1I0J062 215 aa3.73□□□□□ -1.81
CPSF7-213ENST00000494016 PHF5AQ7RTV0 110 aaKnown RBP3.73□□□□□ -1.81
CPSF7-213ENST00000494016 SMIM29Q86T20 159 aa3.73□□□□□ -1.81
CPSF7-213ENST00000494016 A0A087WTM6 91 aa3.72□□□□□ -1.81
CPSF7-213ENST00000494016 A0A087WVE0 104 aa3.72□□□□□ -1.81
CPSF7-213ENST00000494016 IGHV6-1A0A0B4J1U7 121 aa3.72□□□□□ -1.81
CPSF7-213ENST00000494016 UBL5Q9BZL1 73 aa3.72□□□□□ -1.81
CPSF7-213ENST00000494016 RBM12B-AS1Q9P1G2 102 aa3.72□□□□□ -1.81
CPSF7-213ENST00000494016 PKHD1P08F94 4074 aa3.71□□□□□ -1.82
CPSF7-213ENST00000494016 A0A1W2PNM2 257 aa3.71□□□□□ -1.82
CPSF7-213ENST00000494016 LY6G6CO95867 125 aa3.71□□□□□ -1.82
CPSF7-213ENST00000494016 MT3P25713 68 aa3.71□□□□□ -1.82
CPSF7-213ENST00000494016 MP68P56378 58 aa3.71□□□□□ -1.82
CPSF7-213ENST00000494016 UBE2BP63146 152 aa3.71□□□□□ -1.82
CPSF7-213ENST00000494016 LCE1EQ5T753 118 aa3.71□□□□□ -1.82
CPSF7-213ENST00000494016 ATP5EP2Q5VTU8 51 aa3.71□□□□□ -1.82
CPSF7-213ENST00000494016 C3orf22Q8N5N4 141 aa3.71□□□□□ -1.82
CPSF7-213ENST00000494016 PRAC1Q96KF2 57 aa3.71□□□□□ -1.82
CPSF7-213ENST00000494016 FUSP35637 526 aaKnown RBP eCLIP3.7□□□□□ -1.82
CPSF7-213ENST00000494016 PRLHP81277 87 aa3.7□□□□□ -1.82
CPSF7-213ENST00000494016 DYNC1H1Q14204 4646 aaKnown RBP3.7□□□□□ -1.82
CPSF7-213ENST00000494016 DNAH8Q96JB1 4490 aa3.7□□□□□ -1.82
CPSF7-213ENST00000494016 PKD1P98161 4303 aa3.69□□□□□ -1.82
CPSF7-213ENST00000494016 DNAH11Q96DT5 4516 aa3.69□□□□□ -1.82
Retrieved 100 of 20,778 RNA–protein pairs in 61.5 ms