RNA–Protein interactions for RNA: ENST00000493923.1

HDAC6-234, Transcript of histone deacetylase 6, humanhuman

TSL 3

Gene HDAC6, Length 404 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-234ENST00000493923 KRTAP4-8A0A0G2JLE6 195 aa5.4□□□□□ -1.54
HDAC6-234ENST00000493923 TRBV10-1A0A0K0K1A3 114 aa5.4□□□□□ -1.54
HDAC6-234ENST00000493923 UBE2BP63146 152 aa5.4□□□□□ -1.54
HDAC6-234ENST00000493923 Q6ZVQ6 151 aa5.4□□□□□ -1.54
HDAC6-234ENST00000493923 MPLKIPQ8TAP9 179 aa5.4□□□□□ -1.54
HDAC6-234ENST00000493923 IGHV3-38A0A0C4DH36 116 aa5.39□□□□□ -1.55
HDAC6-234ENST00000493923 LRCOL1A6NCL2 159 aa5.39□□□□□ -1.55
HDAC6-234ENST00000493923 NDUFS5O43920 106 aa5.39□□□□□ -1.55
HDAC6-234ENST00000493923 SMR3BP02814 79 aaPredicted RBP5.39□□□□□ -1.55
HDAC6-234ENST00000493923 COX6A2Q02221 97 aa5.39□□□□□ -1.55
HDAC6-234ENST00000493923 FAM30AQ9NZY2 134 aa5.38□□□□□ -1.55
HDAC6-234ENST00000493923 A0A087WZ39 114 aa5.37□□□□□ -1.55
HDAC6-234ENST00000493923 hDV103S1A0JD37 113 aa5.37□□□□□ -1.55
HDAC6-234ENST00000493923 BPY2O14599 106 aa5.37□□□□□ -1.55
HDAC6-234ENST00000493923 UBE2L6O14933 153 aa5.37□□□□□ -1.55
HDAC6-234ENST00000493923 NTM-AS1Q6ZSK4 140 aa5.37□□□□□ -1.55
HDAC6-234ENST00000493923 KTN1-AS1Q86SY8 53 aa5.37□□□□□ -1.55
HDAC6-234ENST00000493923 CDC42SE2Q9NRR3 84 aa5.37□□□□□ -1.55
HDAC6-234ENST00000493923 PKHD1L1Q86WI1 4243 aa5.36□□□□□ -1.55
HDAC6-234ENST00000493923 SLPIP03973 132 aa5.36□□□□□ -1.55
HDAC6-234ENST00000493923 LINC01556Q5JQF7 62 aa5.36□□□□□ -1.55
HDAC6-234ENST00000493923 Q5VSD8 79 aa5.36□□□□□ -1.55
HDAC6-234ENST00000493923 LRP1Q07954 4544 aaKnown RBP5.35□□□□□ -1.55
HDAC6-234ENST00000493923 UBE2AP49459 152 aa5.35□□□□□ -1.55
HDAC6-234ENST00000493923 COX17Q14061 63 aa5.35□□□□□ -1.55
HDAC6-234ENST00000493923 FAM229BQ4G0N7 80 aa5.34□□□□□ -1.55
HDAC6-234ENST00000493923 LELP1Q5T871 98 aa5.34□□□□□ -1.55
HDAC6-234ENST00000493923 FAT3Q8TDW7 4589 aa5.33□□□□□ -1.56
HDAC6-234ENST00000493923 IGLV5-52A0A0A0MRZ9 124 aa5.33□□□□□ -1.56
HDAC6-234ENST00000493923 A0A1B0GW54 56 aa5.33□□□□□ -1.56
HDAC6-234ENST00000493923 LINC00575Q6W349 94 aa5.33□□□□□ -1.56
HDAC6-234ENST00000493923 CYP4F30PQ9H0H9 118 aa5.33□□□□□ -1.56
HDAC6-234ENST00000493923 PSCAO43653 123 aa5.32□□□□□ -1.56
HDAC6-234ENST00000493923 NDUFB1O75438 58 aa5.32□□□□□ -1.56
HDAC6-234ENST00000493923 OCR1Q9BZK8 76 aa5.32□□□□□ -1.56
HDAC6-234ENST00000493923 TOMM7Q9P0U1 55 aa5.32□□□□□ -1.56
HDAC6-234ENST00000493923 Q8IZM0 81 aa5.31□□□□□ -1.56
HDAC6-234ENST00000493923 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP5.3□□□□□ -1.56
HDAC6-234ENST00000493923 LIMD2Q9BT23 127 aa5.3□□□□□ -1.56
HDAC6-234ENST00000493923 IGLV2-33A0A075B6J2 118 aaPredicted RBP5.29□□□□□ -1.56
HDAC6-234ENST00000493923 VPREB1P12018 145 aa5.29□□□□□ -1.56
HDAC6-234ENST00000493923 COX7BP24311 80 aa5.29□□□□□ -1.56
HDAC6-234ENST00000493923 ELOF1P60002 83 aaKnown RBP5.29□□□□□ -1.56
HDAC6-234ENST00000493923 Q6ZSA8 131 aa5.29□□□□□ -1.56
HDAC6-234ENST00000493923 IGHV3OR16-9A0A0B4J2B5 98 aa5.28□□□□□ -1.56
HDAC6-234ENST00000493923 ATP11AUNQ6ZP68 121 aa5.28□□□□□ -1.56
HDAC6-234ENST00000493923 Q6ZRP5 223 aa5.28□□□□□ -1.56
HDAC6-234ENST00000493923 KLK12Q9UKR0 248 aa5.28□□□□□ -1.56
HDAC6-234ENST00000493923 TRBV6-8A0A0A6YYG3 113 aa5.27□□□□□ -1.57
HDAC6-234ENST00000493923 TRAV22A0A0B4J277 110 aa5.27□□□□□ -1.57
HDAC6-234ENST00000493923 KRTAP10-4P60372 401 aaPredicted RBP5.27□□□□□ -1.57
HDAC6-234ENST00000493923 C6orf99Q4VX62 202 aa5.27□□□□□ -1.57
HDAC6-234ENST00000493923 LCE1DQ5T752 114 aa5.27□□□□□ -1.57
HDAC6-234ENST00000493923 PHF5AQ7RTV0 110 aaKnown RBP5.27□□□□□ -1.57
HDAC6-234ENST00000493923 RBM12B-AS1Q9P1G2 102 aa5.27□□□□□ -1.57
HDAC6-234ENST00000493923 IGKV2D-24A0A075B6R9 120 aa5.26□□□□□ -1.57
HDAC6-234ENST00000493923 IGKV4-1P06312 121 aa5.26□□□□□ -1.57
HDAC6-234ENST00000493923 C1orf64Q8NEQ6 169 aa5.26□□□□□ -1.57
HDAC6-234ENST00000493923 CD164L2Q6UWJ8 174 aa5.25□□□□□ -1.57
HDAC6-234ENST00000493923 SCXQ7RTU7 201 aa5.25□□□□□ -1.57
HDAC6-234ENST00000493923 HMCN2Q8NDA2 5059 aa5.25□□□□□ -1.57
HDAC6-234ENST00000493923 M0R378 163 aa5.24□□□□□ -1.57
HDAC6-234ENST00000493923 SYCNQ0VAF6 134 aa5.24□□□□□ -1.57
HDAC6-234ENST00000493923 KRTAP26-1Q6PEX3 210 aa5.24□□□□□ -1.57
HDAC6-234ENST00000493923 LINC00269Q8N2A0 174 aa5.24□□□□□ -1.57
HDAC6-234ENST00000493923 HIGD2AQ9BW72 106 aa5.24□□□□□ -1.57
HDAC6-234ENST00000493923 ZCCHC13Q8WW36 166 aaKnown RBP5.23□□□□□ -1.57
HDAC6-234ENST00000493923 DIRC1Q969H9 104 aa5.23□□□□□ -1.57
HDAC6-234ENST00000493923 ETDCA0A1B0GVM5 59 aa5.22□□□□□ -1.57
HDAC6-234ENST00000493923 H3BPC8 53 aa5.22□□□□□ -1.57
HDAC6-234ENST00000493923 PANO1I0J062 215 aa5.22□□□□□ -1.57
HDAC6-234ENST00000493923 HIGD2BQ4VC39 106 aa5.22□□□□□ -1.57
HDAC6-234ENST00000493923 CLPSL2Q6UWE3 100 aa5.22□□□□□ -1.57
HDAC6-234ENST00000493923 Q6ZQY7 126 aa5.22□□□□□ -1.57
HDAC6-234ENST00000493923 C7orf65Q6ZTY9 151 aa5.22□□□□□ -1.57
HDAC6-234ENST00000493923 CIRBP-AS1Q8TBR5 109 aa5.22□□□□□ -1.57
HDAC6-234ENST00000493923 KRTAP4-7Q9BYR0 210 aa5.22□□□□□ -1.57
HDAC6-234ENST00000493923 LINC00959A0A1B0GUT2 108 aa5.21□□□□□ -1.58
HDAC6-234ENST00000493923 PSPHP1O15172 72 aa5.21□□□□□ -1.58
HDAC6-234ENST00000493923 ZNF73O43830 326 aaPredicted RBP5.21□□□□□ -1.58
HDAC6-234ENST00000493923 LCA10Q71F78 164 aa5.21□□□□□ -1.58
HDAC6-234ENST00000493923 SPANXA2-OT1Q8N9U9 137 aa5.21□□□□□ -1.58
HDAC6-234ENST00000493923 Q9BRP9 147 aa5.21□□□□□ -1.58
HDAC6-234ENST00000493923 IGLV6-57P01721 117 aa5.2□□□□□ -1.58
HDAC6-234ENST00000493923 ANGP03950 147 aaKnown RBP5.2□□□□□ -1.58
HDAC6-234ENST00000493923 Q75L30 129 aa5.2□□□□□ -1.58
HDAC6-234ENST00000493923 A0A1B0GUV1 79 aa5.19□□□□□ -1.58
HDAC6-234ENST00000493923 KRTAP29-1A8MX34 341 aaPredicted RBP5.19□□□□□ -1.58
HDAC6-234ENST00000493923 CHKB-CPT1BH3BT56 60 aa5.19□□□□□ -1.58
HDAC6-234ENST00000493923 Q5VV11 94 aa5.19□□□□□ -1.58
HDAC6-234ENST00000493923 PRR34Q9NV39 138 aa5.19□□□□□ -1.58
HDAC6-234ENST00000493923 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP5.19□□□□□ -1.58
HDAC6-234ENST00000493923 IGLV4-60A0A075B6I1 120 aa5.18□□□□□ -1.58
HDAC6-234ENST00000493923 IGLV10-54A0A075B6I4 117 aa5.18□□□□□ -1.58
HDAC6-234ENST00000493923 A8MUN3 132 aa5.18□□□□□ -1.58
HDAC6-234ENST00000493923 PLA2G1BP04054 148 aaKnown RBP5.18□□□□□ -1.58
HDAC6-234ENST00000493923 MP68P56378 58 aa5.18□□□□□ -1.58
HDAC6-234ENST00000493923 TNXBP22105 4242 aa5.18□□□□□ -1.58
HDAC6-234ENST00000493923 A6NN06 94 aa5.17□□□□□ -1.58
HDAC6-234ENST00000493923 HCG22E2RYF7 251 aa5.17□□□□□ -1.58
Retrieved 100 of 20,778 RNA–protein pairs in 62.7 ms