RNA–Protein interactions for RNA: ENST00000493217.1

TSC22D4-205, Transcript of TSC22 domain family member 4, humanhuman

TSL 1 (best)

Gene TSC22D4, Length 2,060 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSC22D4-205ENST00000493217 VPS13DQ5THJ4 4388 aa11.76□□□□□ -0.53
TSC22D4-205ENST00000493217 RPS28P62857 69 aaKnown RBP11.75□□□□□ -0.53
TSC22D4-205ENST00000493217 A0A0G2JQZ4 141 aa11.75□□□□□ -0.53
TSC22D4-205ENST00000493217 DPH3Q96FX2 82 aa11.75□□□□□ -0.53
TSC22D4-205ENST00000493217 H7BZZ5 65 aa11.74□□□□□ -0.53
TSC22D4-205ENST00000493217 PANO1I0J062 215 aa11.74□□□□□ -0.53
TSC22D4-205ENST00000493217 J3KT08 172 aa11.74□□□□□ -0.53
TSC22D4-205ENST00000493217 SRRM2Q9UQ35 2752 aaKnown RBP11.72□□□□□ -0.53
TSC22D4-205ENST00000493217 DSCR10P59022 87 aa11.72□□□□□ -0.53
TSC22D4-205ENST00000493217 OCR1Q9BZK8 76 aa11.72□□□□□ -0.53
TSC22D4-205ENST00000493217 SPRR1BP22528 89 aa11.71□□□□□ -0.53
TSC22D4-205ENST00000493217 SNURFQ9Y675 71 aa11.71□□□□□ -0.53
TSC22D4-205ENST00000493217 UBE2AP49459 152 aa11.71□□□□□ -0.54
TSC22D4-205ENST00000493217 K7EQZ3 153 aa11.66□□□□□ -0.54
TSC22D4-205ENST00000493217 KRTAP13-1Q8IUC0 172 aa11.66□□□□□ -0.54
TSC22D4-205ENST00000493217 SPACA4Q8TDM5 124 aa11.66□□□□□ -0.54
TSC22D4-205ENST00000493217 A0A087WTM6 91 aa11.65□□□□□ -0.54
TSC22D4-205ENST00000493217 TMEM254Q8TBM7 123 aa11.65□□□□□ -0.54
TSC22D4-205ENST00000493217 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP11.65□□□□□ -0.54
TSC22D4-205ENST00000493217 A0A087WSZ3 146 aa11.64□□□□□ -0.55
TSC22D4-205ENST00000493217 KMT2AQ03164 3969 aa11.63□□□□□ -0.55
TSC22D4-205ENST00000493217 MEGF8Q7Z7M0 2845 aa11.63□□□□□ -0.55
TSC22D4-205ENST00000493217 FAM236DA0A1B0GTK5 79 aa11.63□□□□□ -0.55
TSC22D4-205ENST00000493217 FAM236CP0DP71 79 aa11.63□□□□□ -0.55
TSC22D4-205ENST00000493217 HECTD4Q9Y4D8 3996 aa11.62□□□□□ -0.55
TSC22D4-205ENST00000493217 NDUFC1O43677 76 aa11.61□□□□□ -0.55
TSC22D4-205ENST00000493217 OXTP01178 125 aa11.61□□□□□ -0.55
TSC22D4-205ENST00000493217 Q6ZR54 194 aa11.59□□□□□ -0.55
TSC22D4-205ENST00000493217 DNAH2Q9P225 4427 aa11.59□□□□□ -0.55
TSC22D4-205ENST00000493217 DEFB116Q30KQ4 102 aa11.58□□□□□ -0.56
TSC22D4-205ENST00000493217 A0A0U1RQV1 116 aa11.58□□□□□ -0.56
TSC22D4-205ENST00000493217 FAM30AQ9NZY2 134 aa11.56□□□□□ -0.56
TSC22D4-205ENST00000493217 RTL8CO15255 209 aa11.55□□□□□ -0.56
TSC22D4-205ENST00000493217 HCG22E2RYF7 251 aa11.55□□□□□ -0.56
TSC22D4-205ENST00000493217 DNHD1Q96M86 4753 aa11.54□□□□□ -0.56
TSC22D4-205ENST00000493217 LCE6AA0A183 80 aa11.53□□□□□ -0.56
TSC22D4-205ENST00000493217 DNAH17Q9UFH2 4485 aa11.51□□□□□ -0.57
TSC22D4-205ENST00000493217 SERP1Q9Y6X1 66 aa11.5□□□□□ -0.57
TSC22D4-205ENST00000493217 LINC00472Q9H8W2 130 aa11.49□□□□□ -0.57
TSC22D4-205ENST00000493217 RPL37AP61513 92 aaKnown RBP11.48□□□□□ -0.57
TSC22D4-205ENST00000493217 PLAC8Q9NZF1 115 aa11.48□□□□□ -0.57
TSC22D4-205ENST00000493217 IGLV5-52A0A0A0MRZ9 124 aa11.47□□□□□ -0.57
TSC22D4-205ENST00000493217 LINC00483Q53H64 154 aa11.47□□□□□ -0.57
TSC22D4-205ENST00000493217 PSORS1C2Q9UIG4 136 aa11.47□□□□□ -0.57
TSC22D4-205ENST00000493217 ATP5EP56381 51 aaPredicted RBP11.46□□□□□ -0.57
TSC22D4-205ENST00000493217 C1orf134Q5TEV5 83 aa11.45□□□□□ -0.58
TSC22D4-205ENST00000493217 TGP01266 2768 aa11.45□□□□□ -0.58
TSC22D4-205ENST00000493217 FBN3Q75N90 2809 aa11.45□□□□□ -0.58
TSC22D4-205ENST00000493217 FRAS1Q86XX4 4008 aa11.44□□□□□ -0.58
TSC22D4-205ENST00000493217 PRR15Q8IV56 129 aa11.44□□□□□ -0.58
TSC22D4-205ENST00000493217 DNAH8Q96JB1 4490 aa11.44□□□□□ -0.58
TSC22D4-205ENST00000493217 WFDC13Q8IUB5 93 aa11.44□□□□□ -0.58
TSC22D4-205ENST00000493217 IGLV9-49A0A0B4J1Y8 123 aa11.43□□□□□ -0.58
TSC22D4-205ENST00000493217 KRTAP29-1A8MX34 341 aaPredicted RBP11.43□□□□□ -0.58
TSC22D4-205ENST00000493217 A8MWP4 228 aa11.42□□□□□ -0.58
TSC22D4-205ENST00000493217 C5orf47Q569G3 176 aa11.42□□□□□ -0.58
TSC22D4-205ENST00000493217 ZCCHC13Q8WW36 166 aaKnown RBP11.41□□□□□ -0.58
TSC22D4-205ENST00000493217 ZNF706Q9Y5V0 76 aaPredicted RBP11.4□□□□□ -0.58
TSC22D4-205ENST00000493217 ZNF861PO60384 105 aa11.39□□□□□ -0.59
TSC22D4-205ENST00000493217 Q5XG85 94 aa11.39□□□□□ -0.59
TSC22D4-205ENST00000493217 WWC2-AS2Q96NR7 200 aa11.39□□□□□ -0.59
TSC22D4-205ENST00000493217 LY6G6CO95867 125 aa11.37□□□□□ -0.59
TSC22D4-205ENST00000493217 CASC2Q6XLA1 102 aa11.36□□□□□ -0.59
TSC22D4-205ENST00000493217 Q96NJ1 140 aa11.35□□□□□ -0.59
TSC22D4-205ENST00000493217 DNAH6Q9C0G6 4158 aa11.32□□□□□ -0.6
TSC22D4-205ENST00000493217 MOBPQ13875 183 aa11.32□□□□□ -0.6
TSC22D4-205ENST00000493217 ANAPC11Q9NYG5 84 aa11.32□□□□□ -0.6
TSC22D4-205ENST00000493217 C4orf26Q17RF5 130 aa11.3□□□□□ -0.6
TSC22D4-205ENST00000493217 HRCT1Q6UXD1 115 aa11.3□□□□□ -0.6
TSC22D4-205ENST00000493217 MMP24-AS1A0A0U1RRL7 71 aa11.29□□□□□ -0.6
TSC22D4-205ENST00000493217 NDUFB1O75438 58 aa11.29□□□□□ -0.6
TSC22D4-205ENST00000493217 SMIM26A0A096LP01 95 aa11.28□□□□□ -0.6
TSC22D4-205ENST00000493217 IGLV7-43P04211 117 aa11.28□□□□□ -0.6
TSC22D4-205ENST00000493217 MP68P56378 58 aa11.28□□□□□ -0.6
TSC22D4-205ENST00000493217 DNAH5Q8TE73 4624 aa11.27□□□□□ -0.61
TSC22D4-205ENST00000493217 FP248Q71RG6 208 aaPredicted RBP11.26□□□□□ -0.61
TSC22D4-205ENST00000493217 DNAH11Q96DT5 4516 aa11.26□□□□□ -0.61
TSC22D4-205ENST00000493217 KRTAP10-2P60368 255 aa11.24□□□□□ -0.61
TSC22D4-205ENST00000493217 ALMS1Q8TCU4 4167 aa11.24□□□□□ -0.61
TSC22D4-205ENST00000493217 hDV103S1A0JD37 113 aa11.23□□□□□ -0.61
TSC22D4-205ENST00000493217 ASB16-AS1Q495Z4 193 aa11.23□□□□□ -0.61
TSC22D4-205ENST00000493217 LINC00208Q96KT6 92 aa11.23□□□□□ -0.61
TSC22D4-205ENST00000493217 CIRBP-AS1Q8TBR5 109 aa11.22□□□□□ -0.61
TSC22D4-205ENST00000493217 TRAV22A0A0B4J277 110 aa11.21□□□□□ -0.61
TSC22D4-205ENST00000493217 H0Y9P7 68 aa11.21□□□□□ -0.62
TSC22D4-205ENST00000493217 H3BPC8 53 aa11.2□□□□□ -0.62
TSC22D4-205ENST00000493217 FAM229BQ4G0N7 80 aa11.2□□□□□ -0.62
TSC22D4-205ENST00000493217 C8orf17Q9NRJ1 99 aa11.17□□□□□ -0.62
TSC22D4-205ENST00000493217 A0A1B0GVX0 72 aa11.16□□□□□ -0.62
TSC22D4-205ENST00000493217 CYP4F30PQ9H0H9 118 aa11.16□□□□□ -0.62
TSC22D4-205ENST00000493217 PKD1P98161 4303 aa11.15□□□□□ -0.62
TSC22D4-205ENST00000493217 HYDINQ4G0P3 5121 aa11.15□□□□□ -0.62
TSC22D4-205ENST00000493217 C1orf64Q8NEQ6 169 aa11.15□□□□□ -0.63
TSC22D4-205ENST00000493217 Q6ZSA8 131 aa11.14□□□□□ -0.63
TSC22D4-205ENST00000493217 FAT2Q9NYQ8 4349 aa11.14□□□□□ -0.63
TSC22D4-205ENST00000493217 IGHV6-1A0A0B4J1U7 121 aa11.13□□□□□ -0.63
TSC22D4-205ENST00000493217 CDK2AP2O75956 126 aa11.11□□□□□ -0.63
TSC22D4-205ENST00000493217 TP53AIP1Q9HCN2 124 aa11.11□□□□□ -0.63
TSC22D4-205ENST00000493217 PRR4Q16378 134 aa11.1□□□□□ -0.63
TSC22D4-205ENST00000493217 KRTAP10-1P60331 282 aa11.1□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 65.6 ms