RNA–Protein interactions for RNA: ENST00000492728.1

CHD1L-209, Transcript of chromodomain helicase DNA binding protein 1 like, humanhuman

TSL 2

Gene CHD1L, Length 662 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD1L-209ENST00000492728 Q5XG85 94 aa9.97□□□□□ -0.81
CHD1L-209ENST00000492728 SMIM11BQ8TCY0 68 aa9.97□□□□□ -0.81
CHD1L-209ENST00000492728 COPS9Q8WXC6 57 aa9.96□□□□□ -0.82
CHD1L-209ENST00000492728 IGLV8-61A0A075B6I0 122 aa9.95□□□□□ -0.82
CHD1L-209ENST00000492728 SCGB1D1O95968 90 aa9.92□□□□□ -0.82
CHD1L-209ENST00000492728 MT1HP80294 61 aa9.92□□□□□ -0.82
CHD1L-209ENST00000492728 TRAV13-2A0A0B4J235 113 aa9.91□□□□□ -0.82
CHD1L-209ENST00000492728 A4D1N5 150 aa9.9□□□□□ -0.82
CHD1L-209ENST00000492728 NHP2Q9NX24 153 aaKnown RBP9.87□□□□□ -0.83
CHD1L-209ENST00000492728 FSIP2Q5CZC0 6907 aa9.86□□□□□ -0.83
CHD1L-209ENST00000492728 LINC00575Q6W349 94 aa9.86□□□□□ -0.83
CHD1L-209ENST00000492728 RPL37P61927 97 aaKnown RBP9.84□□□□□ -0.83
CHD1L-209ENST00000492728 Q6ZQY7 126 aa9.83□□□□□ -0.84
CHD1L-209ENST00000492728 VAMP8Q9BV40 100 aa9.83□□□□□ -0.84
CHD1L-209ENST00000492728 FLGP20930 4061 aaPredicted RBP9.8□□□□□ -0.84
CHD1L-209ENST00000492728 hADV29S1A0JD25 119 aa9.79□□□□□ -0.84
CHD1L-209ENST00000492728 F8WEM9 126 aa9.79□□□□□ -0.84
CHD1L-209ENST00000492728 TSTD3H0UI37 97 aa9.79□□□□□ -0.84
CHD1L-209ENST00000492728 IGFL1Q6UW32 110 aa9.79□□□□□ -0.84
CHD1L-209ENST00000492728 TCL1BO95988 128 aa9.78□□□□□ -0.84
CHD1L-209ENST00000492728 VAMP3Q15836 100 aa9.78□□□□□ -0.84
CHD1L-209ENST00000492728 KRTAP4-8Q9BYQ9 185 aa9.78□□□□□ -0.84
CHD1L-209ENST00000492728 PAM16Q9Y3D7 125 aa9.78□□□□□ -0.84
CHD1L-209ENST00000492728 SPATA45Q537H7 98 aa9.77□□□□□ -0.85
CHD1L-209ENST00000492728 HSBP1L1C9JCN9 74 aa9.76□□□□□ -0.85
CHD1L-209ENST00000492728 CLEC2BQ92478 149 aa9.76□□□□□ -0.85
CHD1L-209ENST00000492728 TRBV7-7A0A0K0K1E9 115 aa9.75□□□□□ -0.85
CHD1L-209ENST00000492728 KRTAP10-6P60371 365 aaPredicted RBP9.74□□□□□ -0.85
CHD1L-209ENST00000492728 Q6JHZ5 121 aa9.74□□□□□ -0.85
CHD1L-209ENST00000492728 OCIAD2Q56VL3 154 aa9.73□□□□□ -0.85
CHD1L-209ENST00000492728 CRCT1Q9UGL9 99 aa9.73□□□□□ -0.85
CHD1L-209ENST00000492728 PCP4L1A6NKN8 68 aa9.72□□□□□ -0.85
CHD1L-209ENST00000492728 CFC1BP0CG36 223 aa9.72□□□□□ -0.85
CHD1L-209ENST00000492728 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP9.72□□□□□ -0.85
CHD1L-209ENST00000492728 H3BUT2 72 aa9.7□□□□□ -0.86
CHD1L-209ENST00000492728 HIST1H4GQ99525 98 aa9.7□□□□□ -0.86
CHD1L-209ENST00000492728 UQCR10Q9UDW1 63 aa9.7□□□□□ -0.86
CHD1L-209ENST00000492728 COX8AP10176 69 aa9.69□□□□□ -0.86
CHD1L-209ENST00000492728 BVES-AS1Q5T3Y7 98 aa9.67□□□□□ -0.86
CHD1L-209ENST00000492728 OBSCN-AS1Q96MR7 158 aa9.67□□□□□ -0.86
CHD1L-209ENST00000492728 DLEU1O43261 78 aa9.65□□□□□ -0.86
CHD1L-209ENST00000492728 CFC1P0CG37 223 aa9.65□□□□□ -0.86
CHD1L-209ENST00000492728 PPDPFLQ8WWR9 84 aa9.65□□□□□ -0.86
CHD1L-209ENST00000492728 COX6B2Q6YFQ2 88 aa9.64□□□□□ -0.87
CHD1L-209ENST00000492728 C14orf144Q96I85 54 aa9.64□□□□□ -0.87
CHD1L-209ENST00000492728 FAM218AQ96MZ4 157 aa9.64□□□□□ -0.87
CHD1L-209ENST00000492728 KRTAP9-1A8MXZ3 250 aaPredicted RBP9.63□□□□□ -0.87
CHD1L-209ENST00000492728 SNHG12Q9BXW3 62 aa9.63□□□□□ -0.87
CHD1L-209ENST00000492728 M0R2T5 61 aa9.62□□□□□ -0.87
CHD1L-209ENST00000492728 Q75L30 129 aa9.62□□□□□ -0.87
CHD1L-209ENST00000492728 LST1O00453 97 aa9.59□□□□□ -0.87
CHD1L-209ENST00000492728 C2orf91Q6ZV80 131 aa9.59□□□□□ -0.87
CHD1L-209ENST00000492728 A0A0B4J2C4 111 aa9.57□□□□□ -0.88
CHD1L-209ENST00000492728 RAB37Q96AX2 223 aa9.57□□□□□ -0.88
CHD1L-209ENST00000492728 HIGD1BQ9P298 99 aa9.57□□□□□ -0.88
CHD1L-209ENST00000492728 Q6Q795 121 aa9.56□□□□□ -0.88
CHD1L-209ENST00000492728 ATP11AUNQ6ZP68 121 aa9.55□□□□□ -0.88
CHD1L-209ENST00000492728 NDUFV3P56181 108 aaKnown RBP9.54□□□□□ -0.88
CHD1L-209ENST00000492728 Q96NJ1 140 aa9.54□□□□□ -0.88
CHD1L-209ENST00000492728 A0A087WSZ3 146 aa9.52□□□□□ -0.89
CHD1L-209ENST00000492728 H0YGX0 51 aa9.52□□□□□ -0.89
CHD1L-209ENST00000492728 M0R143 59 aa9.52□□□□□ -0.89
CHD1L-209ENST00000492728 TEN1Q86WV5 123 aa9.51□□□□□ -0.89
CHD1L-209ENST00000492728 C20orf166-AS1Q96NR2 134 aa9.51□□□□□ -0.89
CHD1L-209ENST00000492728 SS18L2Q9UHA2 77 aa9.51□□□□□ -0.89
CHD1L-209ENST00000492728 A8MUU9 505 aa9.49□□□□□ -0.89
CHD1L-209ENST00000492728 FXYD2P54710 66 aa9.49□□□□□ -0.89
CHD1L-209ENST00000492728 HSD52Q0P140 79 aa9.49□□□□□ -0.89
CHD1L-209ENST00000492728 CEND1Q8N111 149 aa9.49□□□□□ -0.89
CHD1L-209ENST00000492728 A0A1W2PNM2 257 aa9.47□□□□□ -0.89
CHD1L-209ENST00000492728 H3BMG7 143 aa9.47□□□□□ -0.89
CHD1L-209ENST00000492728 TRIAP1O43715 76 aa9.46□□□□□ -0.9
CHD1L-209ENST00000492728 FABP2P12104 132 aa9.45□□□□□ -0.9
CHD1L-209ENST00000492728 DSCR10P59022 87 aa9.45□□□□□ -0.9
CHD1L-209ENST00000492728 PRO1854Q9UHT4 67 aa9.45□□□□□ -0.9
CHD1L-209ENST00000492728 A0A1B0GX51 115 aa9.44□□□□□ -0.9
CHD1L-209ENST00000492728 SNCGO76070 127 aa9.44□□□□□ -0.9
CHD1L-209ENST00000492728 A0A1B0GV72 72 aa9.4□□□□□ -0.9
CHD1L-209ENST00000492728 COL5A1-AS1Q5SY13 56 aa9.4□□□□□ -0.9
CHD1L-209ENST00000492728 TMEM238LA0A1B0GVL6 79 aa9.39□□□□□ -0.91
CHD1L-209ENST00000492728 A6NJY4 79 aa9.39□□□□□ -0.91
CHD1L-209ENST00000492728 KRTAP16-1A8MUX0 517 aa9.39□□□□□ -0.91
CHD1L-209ENST00000492728 K7ERJ3 54 aa9.39□□□□□ -0.91
CHD1L-209ENST00000492728 BATFQ16520 125 aa9.39□□□□□ -0.91
CHD1L-209ENST00000492728 SIGMAR1Q99720 223 aa9.39□□□□□ -0.91
CHD1L-209ENST00000492728 KRTAP9-8Q9BYQ0 159 aa9.37□□□□□ -0.91
CHD1L-209ENST00000492728 NOTCH2NLQ7Z3S9 236 aa9.36□□□□□ -0.91
CHD1L-209ENST00000492728 GHRHP01286 108 aa9.34□□□□□ -0.91
CHD1L-209ENST00000492728 IGKV4-1P06312 121 aa9.33□□□□□ -0.92
CHD1L-209ENST00000492728 ANKRD29Q8N6D5 301 aa9.33□□□□□ -0.92
CHD1L-209ENST00000492728 ORMDL1Q9P0S3 153 aa9.33□□□□□ -0.92
CHD1L-209ENST00000492728 USH2AO75445 5202 aa9.33□□□□□ -0.92
CHD1L-209ENST00000492728 TRBV7-4A0A0J9YYF1 115 aa9.32□□□□□ -0.92
CHD1L-209ENST00000492728 LCE3BQ5TA77 95 aa9.32□□□□□ -0.92
CHD1L-209ENST00000492728 SSPOA2VEC9 5147 aa9.31□□□□□ -0.92
CHD1L-209ENST00000492728 TAX1BP3O14907 124 aa9.31□□□□□ -0.92
CHD1L-209ENST00000492728 DEFB116Q30KQ4 102 aa9.31□□□□□ -0.92
CHD1L-209ENST00000492728 DNAL4O96015 105 aa9.3□□□□□ -0.92
CHD1L-209ENST00000492728 LINC00313P59037 77 aa9.3□□□□□ -0.92
CHD1L-209ENST00000492728 LINC00472Q9H8W2 130 aa9.3□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 155.5 ms