RNA–Protein interactions for RNA: ENST00000490969.5

SNAPC3-206, Transcript of small nuclear RNA activating complex polypeptide 3, humanhuman

TSL 1 (best)

Gene SNAPC3, Length 2,524 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNAPC3-206ENST00000490969 PMAIP1Q13794 54 aa12.34□□□□□ -0.43
SNAPC3-206ENST00000490969 UBE2BP63146 152 aa12.33□□□□□ -0.44
SNAPC3-206ENST00000490969 DNHD1Q96M86 4753 aa12.32□□□□□ -0.44
SNAPC3-206ENST00000490969 LINC00476Q8WZB0 136 aa12.32□□□□□ -0.44
SNAPC3-206ENST00000490969 KRTAP7-1Q8IUC3 87 aa12.32□□□□□ -0.44
SNAPC3-206ENST00000490969 STAB2Q8WWQ8 2551 aa12.31□□□□□ -0.44
SNAPC3-206ENST00000490969 WFDC13Q8IUB5 93 aa12.31□□□□□ -0.44
SNAPC3-206ENST00000490969 A0A0G2JQZ4 141 aa12.3□□□□□ -0.44
SNAPC3-206ENST00000490969 A0A1W2PNN7 141 aa12.3□□□□□ -0.44
SNAPC3-206ENST00000490969 MP68P56378 58 aa12.3□□□□□ -0.44
SNAPC3-206ENST00000490969 DEFB116Q30KQ4 102 aa12.3□□□□□ -0.44
SNAPC3-206ENST00000490969 A8MUN3 132 aa12.29□□□□□ -0.44
SNAPC3-206ENST00000490969 DNAH9Q9NYC9 4486 aa12.28□□□□□ -0.44
SNAPC3-206ENST00000490969 MRPL55Q7Z7F7 128 aaKnown RBP12.28□□□□□ -0.44
SNAPC3-206ENST00000490969 IGFL1Q6UW32 110 aa12.27□□□□□ -0.45
SNAPC3-206ENST00000490969 B9D2Q9BPU9 175 aa12.26□□□□□ -0.45
SNAPC3-206ENST00000490969 LINC00208Q96KT6 92 aa12.25□□□□□ -0.45
SNAPC3-206ENST00000490969 C11orf45Q8TAV5 145 aa12.25□□□□□ -0.45
SNAPC3-206ENST00000490969 REG3GQ6UW15 175 aa12.22□□□□□ -0.45
SNAPC3-206ENST00000490969 Q5VV11 94 aa12.22□□□□□ -0.45
SNAPC3-206ENST00000490969 A0A087WSZ3 146 aa12.21□□□□□ -0.45
SNAPC3-206ENST00000490969 DNAH10OSP0CZ25 163 aa12.21□□□□□ -0.45
SNAPC3-206ENST00000490969 DEFB131BA0A096LNP1 70 aa12.2□□□□□ -0.46
SNAPC3-206ENST00000490969 CASC10Q5T4H9 136 aa12.2□□□□□ -0.46
SNAPC3-206ENST00000490969 KRTAP29-1A8MX34 341 aaPredicted RBP12.2□□□□□ -0.46
SNAPC3-206ENST00000490969 RPL37AP61513 92 aaKnown RBP12.19□□□□□ -0.46
SNAPC3-206ENST00000490969 SPANXA2-OT1Q8N9U9 137 aa12.19□□□□□ -0.46
SNAPC3-206ENST00000490969 PRKDCP78527 4128 aaKnown RBP12.18□□□□□ -0.46
SNAPC3-206ENST00000490969 A8MU10 97 aa12.18□□□□□ -0.46
SNAPC3-206ENST00000490969 H0Y9P7 68 aa12.17□□□□□ -0.46
SNAPC3-206ENST00000490969 LYSTQ99698 3801 aa12.16□□□□□ -0.46
SNAPC3-206ENST00000490969 IGLV8-61A0A075B6I0 122 aa12.15□□□□□ -0.46
SNAPC3-206ENST00000490969 Q8N9P0 234 aaPredicted RBP12.15□□□□□ -0.46
SNAPC3-206ENST00000490969 H3BPC8 53 aa12.14□□□□□ -0.47
SNAPC3-206ENST00000490969 CASC2Q6XLA1 102 aa12.13□□□□□ -0.47
SNAPC3-206ENST00000490969 LIMD2Q9BT23 127 aa12.12□□□□□ -0.47
SNAPC3-206ENST00000490969 MEGF8Q7Z7M0 2845 aa12.12□□□□□ -0.47
SNAPC3-206ENST00000490969 CHKB-CPT1BH3BT56 60 aa12.12□□□□□ -0.47
SNAPC3-206ENST00000490969 PRLHP81277 87 aa12.12□□□□□ -0.47
SNAPC3-206ENST00000490969 UBE2AP49459 152 aa12.11□□□□□ -0.47
SNAPC3-206ENST00000490969 TENM2Q9NT68 2774 aa12.11□□□□□ -0.47
SNAPC3-206ENST00000490969 CSMD3Q7Z407 3707 aa12.11□□□□□ -0.47
SNAPC3-206ENST00000490969 LINC00588Q9Y4M8 146 aa12.1□□□□□ -0.47
SNAPC3-206ENST00000490969 CNBPP62633 177 aaKnown RBP12.09□□□□□ -0.47
SNAPC3-206ENST00000490969 PRR15LQ9BU68 103 aa12.08□□□□□ -0.48
SNAPC3-206ENST00000490969 C9orf163Q8N9P6 203 aa12.07□□□□□ -0.48
SNAPC3-206ENST00000490969 C16orf90A8MZG2 172 aa12.05□□□□□ -0.48
SNAPC3-206ENST00000490969 A8MWP4 228 aa12.05□□□□□ -0.48
SNAPC3-206ENST00000490969 LINC00472Q9H8W2 130 aa12.02□□□□□ -0.49
SNAPC3-206ENST00000490969 CD164Q04900 197 aa12.01□□□□□ -0.49
SNAPC3-206ENST00000490969 DNAH7Q8WXX0 4024 aa12□□□□□ -0.49
SNAPC3-206ENST00000490969 A0A096LNI7 61 aa11.99□□□□□ -0.49
SNAPC3-206ENST00000490969 COA5Q86WW8 74 aa11.99□□□□□ -0.49
SNAPC3-206ENST00000490969 Q75L30 129 aa11.99□□□□□ -0.49
SNAPC3-206ENST00000490969 IGKV2-24A0A0C4DH68 120 aa11.98□□□□□ -0.49
SNAPC3-206ENST00000490969 DNAH1Q9P2D7 4330 aa11.97□□□□□ -0.49
SNAPC3-206ENST00000490969 LCA10Q71F78 164 aa11.97□□□□□ -0.49
SNAPC3-206ENST00000490969 LOC101927531A0A1B0GV80 90 aa11.97□□□□□ -0.49
SNAPC3-206ENST00000490969 SPTSSBQ8NFR3 76 aa11.97□□□□□ -0.49
SNAPC3-206ENST00000490969 IGLV7-46A0A075B6I9 117 aa11.96□□□□□ -0.5
SNAPC3-206ENST00000490969 PLECQ15149 4684 aaKnown RBP11.96□□□□□ -0.5
SNAPC3-206ENST00000490969 KTN1-AS1Q86SY8 53 aa11.95□□□□□ -0.5
SNAPC3-206ENST00000490969 MMP24-AS1A0A0U1RRL7 71 aa11.94□□□□□ -0.5
SNAPC3-206ENST00000490969 A6NED7 52 aa11.94□□□□□ -0.5
SNAPC3-206ENST00000490969 SPRR1BP22528 89 aa11.94□□□□□ -0.5
SNAPC3-206ENST00000490969 DYNC2H1Q8NCM8 4307 aaKnown RBP11.93□□□□□ -0.5
SNAPC3-206ENST00000490969 H0Y9J4 135 aa11.93□□□□□ -0.5
SNAPC3-206ENST00000490969 ATP11AUNQ6ZP68 121 aa11.93□□□□□ -0.5
SNAPC3-206ENST00000490969 DNAH10Q8IVF4 4471 aa11.92□□□□□ -0.5
SNAPC3-206ENST00000490969 STARD9Q9P2P6 4700 aa11.92□□□□□ -0.5
SNAPC3-206ENST00000490969 FBN3Q75N90 2809 aa11.9□□□□□ -0.5
SNAPC3-206ENST00000490969 KRTAP11-1Q8IUC1 163 aa11.89□□□□□ -0.51
SNAPC3-206ENST00000490969 TGP01266 2768 aa11.89□□□□□ -0.51
SNAPC3-206ENST00000490969 PCOTHQ58A44 107 aa11.88□□□□□ -0.51
SNAPC3-206ENST00000490969 SRRM2Q9UQ35 2752 aaKnown RBP11.88□□□□□ -0.51
SNAPC3-206ENST00000490969 PHF5AQ7RTV0 110 aaKnown RBP11.86□□□□□ -0.51
SNAPC3-206ENST00000490969 KRTAP1-5Q9BYS1 174 aa11.86□□□□□ -0.51
SNAPC3-206ENST00000490969 APLNQ9ULZ1 77 aa11.86□□□□□ -0.51
SNAPC3-206ENST00000490969 CDC42SE1Q9NRR8 79 aa11.85□□□□□ -0.51
SNAPC3-206ENST00000490969 A6NN06 94 aa11.84□□□□□ -0.51
SNAPC3-206ENST00000490969 LINC01558Q9Y6Z2 57 aa11.82□□□□□ -0.52
SNAPC3-206ENST00000490969 SPAG11AQ6PDA7 123 aa11.82□□□□□ -0.52
SNAPC3-206ENST00000490969 TP53AIP1Q9HCN2 124 aa11.82□□□□□ -0.52
SNAPC3-206ENST00000490969 RBM12B-AS1Q9P1G2 102 aa11.81□□□□□ -0.52
SNAPC3-206ENST00000490969 NDUFS5O43920 106 aa11.81□□□□□ -0.52
SNAPC3-206ENST00000490969 CHTF8P0CG12 524 aa11.8□□□□□ -0.52
SNAPC3-206ENST00000490969 ASB16-AS1Q495Z4 193 aa11.8□□□□□ -0.52
SNAPC3-206ENST00000490969 PLAC8Q9NZF1 115 aa11.8□□□□□ -0.52
SNAPC3-206ENST00000490969 MOBPQ13875 183 aa11.78□□□□□ -0.52
SNAPC3-206ENST00000490969 Q6ZR54 194 aa11.77□□□□□ -0.53
SNAPC3-206ENST00000490969 Q96NJ1 140 aa11.77□□□□□ -0.53
SNAPC3-206ENST00000490969 UBE2DNLQ8IWF7 75 aa11.74□□□□□ -0.53
SNAPC3-206ENST00000490969 C8orf17Q9NRJ1 99 aa11.74□□□□□ -0.53
SNAPC3-206ENST00000490969 VPS13DQ5THJ4 4388 aa11.72□□□□□ -0.53
SNAPC3-206ENST00000490969 KMT2AQ03164 3969 aa11.72□□□□□ -0.53
SNAPC3-206ENST00000490969 HRES1P13985 223 aa11.71□□□□□ -0.53
SNAPC3-206ENST00000490969 KRTAP21-3Q3LHN1 58 aa11.7□□□□□ -0.54
SNAPC3-206ENST00000490969 SPINK7P58062 85 aa11.69□□□□□ -0.54
SNAPC3-206ENST00000490969 NUPR2A6NF83 97 aa11.68□□□□□ -0.54
SNAPC3-206ENST00000490969 IGLV9-49A0A0B4J1Y8 123 aa11.67□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 99.3 ms