RNA–Protein interactions for RNA: ENST00000490831.1

COL27A1-206, Transcript of collagen type XXVII alpha 1 chain, humanhuman

TSL 3

Gene COL27A1, Length 666 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL27A1-206ENST00000490831 Q6ZQY7 126 aa8.4□□□□□ -1.06
COL27A1-206ENST00000490831 IGLV8-61A0A075B6I0 122 aa8.38□□□□□ -1.07
COL27A1-206ENST00000490831 A0A0B4J2C4 111 aa8.38□□□□□ -1.07
COL27A1-206ENST00000490831 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP8.38□□□□□ -1.07
COL27A1-206ENST00000490831 A0A0G2JQZ4 141 aa8.37□□□□□ -1.07
COL27A1-206ENST00000490831 SEC61BP60468 96 aaKnown RBP8.37□□□□□ -1.07
COL27A1-206ENST00000490831 PPDPFLQ8WWR9 84 aa8.37□□□□□ -1.07
COL27A1-206ENST00000490831 F8WEM9 126 aa8.36□□□□□ -1.07
COL27A1-206ENST00000490831 RAB37Q96AX2 223 aa8.35□□□□□ -1.07
COL27A1-206ENST00000490831 PYY3Q5JQD4 70 aa8.34□□□□□ -1.07
COL27A1-206ENST00000490831 LCE2AQ5TA79 106 aaPredicted RBP8.34□□□□□ -1.07
COL27A1-206ENST00000490831 C1orf195Q5TG92 126 aa8.34□□□□□ -1.07
COL27A1-206ENST00000490831 Q6JHZ5 121 aa8.34□□□□□ -1.07
COL27A1-206ENST00000490831 CEND1Q8N111 149 aa8.34□□□□□ -1.07
COL27A1-206ENST00000490831 H0YGX0 51 aa8.32□□□□□ -1.08
COL27A1-206ENST00000490831 OCIAD2Q56VL3 154 aa8.32□□□□□ -1.08
COL27A1-206ENST00000490831 KRTAP4-1Q9BYQ7 146 aa8.32□□□□□ -1.08
COL27A1-206ENST00000490831 CLEC2BQ92478 149 aa8.31□□□□□ -1.08
COL27A1-206ENST00000490831 TMEM238LA0A1B0GVL6 79 aa8.3□□□□□ -1.08
COL27A1-206ENST00000490831 A6NJY4 79 aa8.3□□□□□ -1.08
COL27A1-206ENST00000490831 TCL1BO95988 128 aa8.3□□□□□ -1.08
COL27A1-206ENST00000490831 IGFL1Q6UW32 110 aa8.3□□□□□ -1.08
COL27A1-206ENST00000490831 FXYD2P54710 66 aa8.29□□□□□ -1.08
COL27A1-206ENST00000490831 FAM218AQ96MZ4 157 aa8.29□□□□□ -1.08
COL27A1-206ENST00000490831 PRO1854Q9UHT4 67 aa8.29□□□□□ -1.08
COL27A1-206ENST00000490831 SNHG12Q9BXW3 62 aa8.28□□□□□ -1.08
COL27A1-206ENST00000490831 TRBV7-7A0A0K0K1E9 115 aa8.27□□□□□ -1.09
COL27A1-206ENST00000490831 A0A1B0GX51 115 aa8.27□□□□□ -1.09
COL27A1-206ENST00000490831 C9orf92A6NGG3 77 aa8.27□□□□□ -1.09
COL27A1-206ENST00000490831 SNCGO76070 127 aa8.27□□□□□ -1.09
COL27A1-206ENST00000490831 HSD52Q0P140 79 aa8.25□□□□□ -1.09
COL27A1-206ENST00000490831 H3BUT2 72 aa8.23□□□□□ -1.09
COL27A1-206ENST00000490831 TMA7Q9Y2S6 64 aaKnown RBP8.23□□□□□ -1.09
COL27A1-206ENST00000490831 TRIAP1O43715 76 aa8.22□□□□□ -1.09
COL27A1-206ENST00000490831 Q6Q795 121 aa8.22□□□□□ -1.09
COL27A1-206ENST00000490831 NDUFV3P56181 108 aaKnown RBP8.21□□□□□ -1.1
COL27A1-206ENST00000490831 GHRHP01286 108 aa8.2□□□□□ -1.1
COL27A1-206ENST00000490831 PCOTHQ58A44 107 aa8.2□□□□□ -1.1
COL27A1-206ENST00000490831 UQCR10Q9UDW1 63 aa8.2□□□□□ -1.1
COL27A1-206ENST00000490831 TEN1Q86WV5 123 aa8.17□□□□□ -1.1
COL27A1-206ENST00000490831 K7ERJ3 54 aa8.16□□□□□ -1.1
COL27A1-206ENST00000490831 RPL37P61927 97 aaKnown RBP8.16□□□□□ -1.1
COL27A1-206ENST00000490831 H3BMG7 143 aa8.15□□□□□ -1.1
COL27A1-206ENST00000490831 LST1O00453 97 aa8.14□□□□□ -1.11
COL27A1-206ENST00000490831 SS18L2Q9UHA2 77 aa8.14□□□□□ -1.11
COL27A1-206ENST00000490831 H3BQ85 93 aa8.13□□□□□ -1.11
COL27A1-206ENST00000490831 FABP2P12104 132 aa8.13□□□□□ -1.11
COL27A1-206ENST00000490831 PSMB2P49721 201 aa8.13□□□□□ -1.11
COL27A1-206ENST00000490831 KRTAP19-2Q3LHN2 52 aa8.13□□□□□ -1.11
COL27A1-206ENST00000490831 COX6CP09669 75 aa8.12□□□□□ -1.11
COL27A1-206ENST00000490831 LCE2CQ5TA81 110 aa8.12□□□□□ -1.11
COL27A1-206ENST00000490831 DNAL4O96015 105 aa8.11□□□□□ -1.11
COL27A1-206ENST00000490831 ORMDL1Q9P0S3 153 aa8.11□□□□□ -1.11
COL27A1-206ENST00000490831 A0A087WSZ3 146 aa8.09□□□□□ -1.11
COL27A1-206ENST00000490831 A0A1W2PNM2 257 aa8.08□□□□□ -1.12
COL27A1-206ENST00000490831 TMEM256-PLSCR3K7ERE1 68 aa8.08□□□□□ -1.12
COL27A1-206ENST00000490831 OBSCN-AS1Q96MR7 158 aa8.07□□□□□ -1.12
COL27A1-206ENST00000490831 Q96NJ1 140 aa8.07□□□□□ -1.12
COL27A1-206ENST00000490831 TRACP01848 142 aa8.06□□□□□ -1.12
COL27A1-206ENST00000490831 Q75L30 129 aa8.06□□□□□ -1.12
COL27A1-206ENST00000490831 TRBV7-4A0A0J9YYF1 115 aa8.05□□□□□ -1.12
COL27A1-206ENST00000490831 UBE2V1Q13404 147 aa8.04□□□□□ -1.12
COL27A1-206ENST00000490831 ANKRD29Q8N6D5 301 aa8.04□□□□□ -1.12
COL27A1-206ENST00000490831 KRTAP9-2Q9BYQ4 174 aa8.04□□□□□ -1.12
COL27A1-206ENST00000490831 SCGB1C2P0DMR2 95 aa8.01□□□□□ -1.13
COL27A1-206ENST00000490831 SMIM6P0DI80 62 aa8□□□□□ -1.13
COL27A1-206ENST00000490831 C20orf166-AS1Q96NR2 134 aa8□□□□□ -1.13
COL27A1-206ENST00000490831 MT1HP80294 61 aa7.99□□□□□ -1.13
COL27A1-206ENST00000490831 A0A1B0GV72 72 aa7.98□□□□□ -1.13
COL27A1-206ENST00000490831 M0R143 59 aa7.98□□□□□ -1.13
COL27A1-206ENST00000490831 ATP11AUNQ6ZP68 121 aa7.98□□□□□ -1.13
COL27A1-206ENST00000490831 A8MUU9 505 aa7.97□□□□□ -1.13
COL27A1-206ENST00000490831 CCKP06307 115 aa7.97□□□□□ -1.13
COL27A1-206ENST00000490831 LINC00472Q9H8W2 130 aa7.96□□□□□ -1.14
COL27A1-206ENST00000490831 RBM3P98179 157 aaKnown RBP7.94□□□□□ -1.14
COL27A1-206ENST00000490831 SIGMAR1Q99720 223 aa7.94□□□□□ -1.14
COL27A1-206ENST00000490831 IGKV4-1P06312 121 aa7.93□□□□□ -1.14
COL27A1-206ENST00000490831 BAALC-AS2P0C853 105 aa7.93□□□□□ -1.14
COL27A1-206ENST00000490831 DSCR10P59022 87 aa7.92□□□□□ -1.14
COL27A1-206ENST00000490831 ATXN8Q156A1 80 aa7.91□□□□□ -1.14
COL27A1-206ENST00000490831 DSCR8Q96T75 97 aa7.91□□□□□ -1.14
COL27A1-206ENST00000490831 KRTAP16-1A8MUX0 517 aa7.9□□□□□ -1.14
COL27A1-206ENST00000490831 LINC00313P59037 77 aa7.9□□□□□ -1.14
COL27A1-206ENST00000490831 FLGP20930 4061 aaPredicted RBP7.9□□□□□ -1.15
COL27A1-206ENST00000490831 NAA38Q9BRA0 125 aaKnown RBP7.89□□□□□ -1.15
COL27A1-206ENST00000490831 C21orf62-AS1Q17RA5 79 aa7.88□□□□□ -1.15
COL27A1-206ENST00000490831 LCE2DQ5TA82 110 aaPredicted RBP7.88□□□□□ -1.15
COL27A1-206ENST00000490831 COX6B2Q6YFQ2 88 aa7.88□□□□□ -1.15
COL27A1-206ENST00000490831 C9JAW5 83 aa7.87□□□□□ -1.15
COL27A1-206ENST00000490831 TSTD3H0UI37 97 aa7.87□□□□□ -1.15
COL27A1-206ENST00000490831 DEFB116Q30KQ4 102 aa7.87□□□□□ -1.15
COL27A1-206ENST00000490831 VPS25Q9BRG1 176 aa7.87□□□□□ -1.15
COL27A1-206ENST00000490831 NOTCH2NLQ7Z3S9 236 aa7.86□□□□□ -1.15
COL27A1-206ENST00000490831 JMJD7-PLA2G4BH0Y9G9 81 aa7.85□□□□□ -1.15
COL27A1-206ENST00000490831 LOC105371267A0A1B0GV96 52 aa7.84□□□□□ -1.15
COL27A1-206ENST00000490831 LORP23490 312 aaPredicted RBP7.84□□□□□ -1.15
COL27A1-206ENST00000490831 LYRM7Q5U5X0 104 aa7.84□□□□□ -1.15
COL27A1-206ENST00000490831 Q6ZQT0 140 aa7.84□□□□□ -1.15
COL27A1-206ENST00000490831 LOC110117498A0A087WWA1 95 aa7.83□□□□□ -1.16
COL27A1-206ENST00000490831 A0A1B0GW54 56 aa7.83□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 127.2 ms