RNA–Protein interactions for RNA: ENST00000490751.1

LDB1-204, Transcript of LIM domain binding 1, humanhuman

TSL 2

Gene LDB1, Length 762 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDB1-204ENST00000490751 C14orf144Q96I85 54 aa17.05■□□□□ 0.32
LDB1-204ENST00000490751 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP17.03■□□□□ 0.32
LDB1-204ENST00000490751 PAM16Q9Y3D7 125 aa17.03■□□□□ 0.32
LDB1-204ENST00000490751 TCL1BO95988 128 aa17.02■□□□□ 0.32
LDB1-204ENST00000490751 PCOTHQ58A44 107 aa17.02■□□□□ 0.32
LDB1-204ENST00000490751 SPATA45Q537H7 98 aa17■□□□□ 0.31
LDB1-204ENST00000490751 Q6JHZ5 121 aa17■□□□□ 0.31
LDB1-204ENST00000490751 KRTAP9-2Q9BYQ4 174 aa17■□□□□ 0.31
LDB1-204ENST00000490751 IGLV8-61A0A075B6I0 122 aa16.99■□□□□ 0.31
LDB1-204ENST00000490751 CFC1BP0CG36 223 aa16.98■□□□□ 0.31
LDB1-204ENST00000490751 CFC1P0CG37 223 aa16.98■□□□□ 0.31
LDB1-204ENST00000490751 HIGD1BQ9P298 99 aa16.98■□□□□ 0.31
LDB1-204ENST00000490751 IGFL1Q6UW32 110 aa16.97■□□□□ 0.31
LDB1-204ENST00000490751 CLEC2BQ92478 149 aa16.97■□□□□ 0.31
LDB1-204ENST00000490751 OCIAD2Q56VL3 154 aa16.96■□□□□ 0.31
LDB1-204ENST00000490751 PPDPFLQ8WWR9 84 aa16.95■□□□□ 0.3
LDB1-204ENST00000490751 RAB37Q96AX2 223 aa16.95■□□□□ 0.3
LDB1-204ENST00000490751 VAMP8Q9BV40 100 aa16.95■□□□□ 0.3
LDB1-204ENST00000490751 C2orf91Q6ZV80 131 aa16.93■□□□□ 0.3
LDB1-204ENST00000490751 TRBV7-7A0A0K0K1E9 115 aa16.91■□□□□ 0.3
LDB1-204ENST00000490751 A0A0B4J2C4 111 aa16.9■□□□□ 0.3
LDB1-204ENST00000490751 SNHG12Q9BXW3 62 aa16.9■□□□□ 0.3
LDB1-204ENST00000490751 H3BUT2 72 aa16.84■□□□□ 0.29
LDB1-204ENST00000490751 H0YGX0 51 aa16.83■□□□□ 0.28
LDB1-204ENST00000490751 RPL37P61927 97 aaKnown RBP16.83■□□□□ 0.28
LDB1-204ENST00000490751 CEND1Q8N111 149 aa16.82■□□□□ 0.28
LDB1-204ENST00000490751 SNCGO76070 127 aa16.81■□□□□ 0.28
LDB1-204ENST00000490751 LCE2CQ5TA81 110 aa16.81■□□□□ 0.28
LDB1-204ENST00000490751 FAM218AQ96MZ4 157 aa16.81■□□□□ 0.28
LDB1-204ENST00000490751 KRTAP19-2Q3LHN2 52 aa16.78■□□□□ 0.28
LDB1-204ENST00000490751 TMEM238LA0A1B0GVL6 79 aa16.76■□□□□ 0.27
LDB1-204ENST00000490751 A6NJY4 79 aa16.76■□□□□ 0.27
LDB1-204ENST00000490751 PRO1854Q9UHT4 67 aa16.75■□□□□ 0.27
LDB1-204ENST00000490751 FXYD2P54710 66 aa16.73■□□□□ 0.27
LDB1-204ENST00000490751 NDUFV3P56181 108 aaKnown RBP16.71■□□□□ 0.27
LDB1-204ENST00000490751 A0A1B0GX51 115 aa16.68■□□□□ 0.26
LDB1-204ENST00000490751 LST1O00453 97 aa16.68■□□□□ 0.26
LDB1-204ENST00000490751 PYY3Q5JQD4 70 aa16.66■□□□□ 0.26
LDB1-204ENST00000490751 Q6Q795 121 aa16.66■□□□□ 0.26
LDB1-204ENST00000490751 TRIAP1O43715 76 aa16.64■□□□□ 0.25
LDB1-204ENST00000490751 SS18L2Q9UHA2 77 aa16.64■□□□□ 0.25
LDB1-204ENST00000490751 TEN1Q86WV5 123 aa16.63■□□□□ 0.25
LDB1-204ENST00000490751 OBSCN-AS1Q96MR7 158 aa16.63■□□□□ 0.25
LDB1-204ENST00000490751 GHRHP01286 108 aa16.62■□□□□ 0.25
LDB1-204ENST00000490751 FABP2P12104 132 aa16.61■□□□□ 0.25
LDB1-204ENST00000490751 MT1HP80294 61 aa16.61■□□□□ 0.25
LDB1-204ENST00000490751 H3BMG7 143 aa16.6■□□□□ 0.25
LDB1-204ENST00000490751 HSD52Q0P140 79 aa16.6■□□□□ 0.25
LDB1-204ENST00000490751 A0A087WSZ3 146 aa16.55■□□□□ 0.24
LDB1-204ENST00000490751 K7ERJ3 54 aa16.54■□□□□ 0.24
LDB1-204ENST00000490751 Q75L30 129 aa16.53■□□□□ 0.24
LDB1-204ENST00000490751 PSMB2P49721 201 aa16.51■□□□□ 0.23
LDB1-204ENST00000490751 DNAL4O96015 105 aa16.49■□□□□ 0.23
LDB1-204ENST00000490751 TMA7Q9Y2S6 64 aaKnown RBP16.49■□□□□ 0.23
LDB1-204ENST00000490751 ATP11AUNQ6ZP68 121 aa16.48■□□□□ 0.23
LDB1-204ENST00000490751 Q96NJ1 140 aa16.48■□□□□ 0.23
LDB1-204ENST00000490751 A0A1W2PNM2 257 aa16.46■□□□□ 0.23
LDB1-204ENST00000490751 ORMDL1Q9P0S3 153 aa16.46■□□□□ 0.23
LDB1-204ENST00000490751 COX6B2Q6YFQ2 88 aa16.45■□□□□ 0.22
LDB1-204ENST00000490751 UQCR10Q9UDW1 63 aa16.45■□□□□ 0.22
LDB1-204ENST00000490751 LCE2DQ5TA82 110 aaPredicted RBP16.44■□□□□ 0.22
LDB1-204ENST00000490751 KRTAP9-6A0A140TA67 174 aa16.43■□□□□ 0.22
LDB1-204ENST00000490751 COX6CP09669 75 aa16.43■□□□□ 0.22
LDB1-204ENST00000490751 A0A1B0GV72 72 aa16.41■□□□□ 0.22
LDB1-204ENST00000490751 H3BQ85 93 aa16.4■□□□□ 0.22
LDB1-204ENST00000490751 ANKRD29Q8N6D5 301 aa16.39■□□□□ 0.21
LDB1-204ENST00000490751 TMEM256-PLSCR3K7ERE1 68 aa16.36■□□□□ 0.21
LDB1-204ENST00000490751 C20orf166-AS1Q96NR2 134 aa16.36■□□□□ 0.21
LDB1-204ENST00000490751 SIGMAR1Q99720 223 aa16.34■□□□□ 0.21
LDB1-204ENST00000490751 TRBV7-4A0A0J9YYF1 115 aa16.33■□□□□ 0.2
LDB1-204ENST00000490751 A8MUU9 505 aa16.32■□□□□ 0.2
LDB1-204ENST00000490751 M0R2T5 61 aa16.31■□□□□ 0.2
LDB1-204ENST00000490751 DSCR10P59022 87 aa16.31■□□□□ 0.2
LDB1-204ENST00000490751 KRTAP10-6P60371 365 aaPredicted RBP16.3■□□□□ 0.2
LDB1-204ENST00000490751 FLGP20930 4061 aaPredicted RBP16.3■□□□□ 0.2
LDB1-204ENST00000490751 LORP23490 312 aaPredicted RBP16.29■□□□□ 0.2
LDB1-204ENST00000490751 UBE2V1Q13404 147 aa16.26■□□□□ 0.19
LDB1-204ENST00000490751 TRACP01848 142 aa16.25■□□□□ 0.19
LDB1-204ENST00000490751 IGKV4-1P06312 121 aa16.25■□□□□ 0.19
LDB1-204ENST00000490751 CCKP06307 115 aa16.24■□□□□ 0.19
LDB1-204ENST00000490751 SCGB1C2P0DMR2 95 aa16.23■□□□□ 0.19
LDB1-204ENST00000490751 LINC00313P59037 77 aa16.18■□□□□ 0.18
LDB1-204ENST00000490751 LINC00472Q9H8W2 130 aa16.17■□□□□ 0.18
LDB1-204ENST00000490751 DEFB116Q30KQ4 102 aa16.16■□□□□ 0.18
LDB1-204ENST00000490751 VPS25Q9BRG1 176 aa16.13■□□□□ 0.17
LDB1-204ENST00000490751 KRTAP16-1A8MUX0 517 aa16.12■□□□□ 0.17
LDB1-204ENST00000490751 RBM3P98179 157 aaKnown RBP16.11■□□□□ 0.17
LDB1-204ENST00000490751 NOTCH2NLQ7Z3S9 236 aa16.09■□□□□ 0.17
LDB1-204ENST00000490751 DSCR8Q96T75 97 aa16.08■□□□□ 0.16
LDB1-204ENST00000490751 BAALC-AS2P0C853 105 aa16.06■□□□□ 0.16
LDB1-204ENST00000490751 CRCT1Q9UGL9 99 aa16.05■□□□□ 0.16
LDB1-204ENST00000490751 TRBV20-1A0A075B6N2 111 aa16.04■□□□□ 0.16
LDB1-204ENST00000490751 IGHV6-1A0A0B4J1U7 121 aa16.04■□□□□ 0.16
LDB1-204ENST00000490751 FSIP2Q5CZC0 6907 aa16.03■□□□□ 0.16
LDB1-204ENST00000490751 M0R143 59 aa16.02■□□□□ 0.16
LDB1-204ENST00000490751 C9JAW5 83 aa15.98■□□□□ 0.15
LDB1-204ENST00000490751 NAA38Q9BRA0 125 aaKnown RBP15.98■□□□□ 0.15
LDB1-204ENST00000490751 ATXN8Q156A1 80 aa15.95■□□□□ 0.14
LDB1-204ENST00000490751 A0A1B0GVX0 72 aa15.94■□□□□ 0.14
LDB1-204ENST00000490751 C8orf87E5RJ46 101 aa15.92■□□□□ 0.14
Retrieved 100 of 20,778 RNA–protein pairs in 15.2 ms