RNA–Protein interactions for RNA: ENST00000489406.1

UFD1-209, Transcript of ubiquitin recognition factor in ER associated degradation 1, humanhuman

TSL 2

Gene UFD1, Length 994 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UFD1-209ENST00000489406 MT-ND4LP03901 98 aa6.84□□□□□ -1.31
UFD1-209ENST00000489406 IFITM2Q01629 132 aa6.84□□□□□ -1.31
UFD1-209ENST00000489406 CLEC2BQ92478 149 aa6.83□□□□□ -1.32
UFD1-209ENST00000489406 KRTAP19-4Q3LI73 84 aa6.82□□□□□ -1.32
UFD1-209ENST00000489406 ADAMTSL4-AS1Q5T5F5 129 aa6.82□□□□□ -1.32
UFD1-209ENST00000489406 TCTE3Q8IZS6 198 aa6.82□□□□□ -1.32
UFD1-209ENST00000489406 URB1-AS1Q96HZ7 61 aa6.82□□□□□ -1.32
UFD1-209ENST00000489406 SCGB1D1O95968 90 aa6.81□□□□□ -1.32
UFD1-209ENST00000489406 LINC00310P59036 64 aa6.8□□□□□ -1.32
UFD1-209ENST00000489406 Q6JHZ5 121 aa6.8□□□□□ -1.32
UFD1-209ENST00000489406 LEPROTO15243 131 aa6.79□□□□□ -1.32
UFD1-209ENST00000489406 LINC00614P0C842 121 aa6.79□□□□□ -1.32
UFD1-209ENST00000489406 SPANXDQ9BXN6 97 aa6.79□□□□□ -1.32
UFD1-209ENST00000489406 TRAV12-1A0A0B4J245 112 aa6.78□□□□□ -1.32
UFD1-209ENST00000489406 SPANXCQ9NY87 97 aa6.77□□□□□ -1.33
UFD1-209ENST00000489406 TRBV7-6A0A0J9YX20 115 aa6.76□□□□□ -1.33
UFD1-209ENST00000489406 A0A1W2PNM2 257 aa6.76□□□□□ -1.33
UFD1-209ENST00000489406 LCE4AQ5TA78 99 aa6.76□□□□□ -1.33
UFD1-209ENST00000489406 LINC00518Q8N0U6 118 aa6.76□□□□□ -1.33
UFD1-209ENST00000489406 A0A1B0GWB2 263 aa6.75□□□□□ -1.33
UFD1-209ENST00000489406 J3QQQ9 107 aa6.75□□□□□ -1.33
UFD1-209ENST00000489406 FABP9Q0Z7S8 132 aa6.74□□□□□ -1.33
UFD1-209ENST00000489406 KRTAP19-8Q3LI54 63 aa6.74□□□□□ -1.33
UFD1-209ENST00000489406 LCE1DQ5T752 114 aa6.74□□□□□ -1.33
UFD1-209ENST00000489406 LINC00313P59037 77 aa6.73□□□□□ -1.33
UFD1-209ENST00000489406 NMUP48645 174 aa6.72□□□□□ -1.33
UFD1-209ENST00000489406 FAM218AQ96MZ4 157 aa6.72□□□□□ -1.33
UFD1-209ENST00000489406 SPINK7P58062 85 aa6.71□□□□□ -1.34
UFD1-209ENST00000489406 LINC00308Q8TCZ7 52 aa6.71□□□□□ -1.34
UFD1-209ENST00000489406 IFI27L1Q96BM0 104 aa6.71□□□□□ -1.34
UFD1-209ENST00000489406 TRAV13-2A0A0B4J235 113 aa6.7□□□□□ -1.34
UFD1-209ENST00000489406 A0A0J9YXY3 114 aa6.7□□□□□ -1.34
UFD1-209ENST00000489406 ZNF815PA8K554 130 aa6.7□□□□□ -1.34
UFD1-209ENST00000489406 OCIAD2Q56VL3 154 aa6.7□□□□□ -1.34
UFD1-209ENST00000489406 C18orf32Q8TCD1 76 aa6.7□□□□□ -1.34
UFD1-209ENST00000489406 COLCA2A8K830 154 aa6.69□□□□□ -1.34
UFD1-209ENST00000489406 SS18L2Q9UHA2 77 aa6.69□□□□□ -1.34
UFD1-209ENST00000489406 SLC7A5P1Q8MH63 180 aa6.68□□□□□ -1.34
UFD1-209ENST00000489406 SEC11CQ9BY50 192 aa6.68□□□□□ -1.34
UFD1-209ENST00000489406 IMUPQ9GZP8 106 aa6.68□□□□□ -1.34
UFD1-209ENST00000489406 WFDC13Q8IUB5 93 aa6.67□□□□□ -1.34
UFD1-209ENST00000489406 NHP2Q9NX24 153 aaKnown RBP6.67□□□□□ -1.34
UFD1-209ENST00000489406 KRTAP8-1Q8IUC2 63 aa6.65□□□□□ -1.34
UFD1-209ENST00000489406 SIGMAR1Q99720 223 aa6.65□□□□□ -1.34
UFD1-209ENST00000489406 H0Y8G0 127 aa6.64□□□□□ -1.35
UFD1-209ENST00000489406 KRTAP4-9Q9BYQ8 210 aa6.64□□□□□ -1.35
UFD1-209ENST00000489406 KRTAP4-7Q9BYR0 210 aa6.64□□□□□ -1.35
UFD1-209ENST00000489406 DSTQ03001 7570 aaKnown RBP6.63□□□□□ -1.35
UFD1-209ENST00000489406 A4D1N5 150 aa6.63□□□□□ -1.35
UFD1-209ENST00000489406 LITAFQ99732 161 aa6.62□□□□□ -1.35
UFD1-209ENST00000489406 HERVK_113P61574 105 aa6.61□□□□□ -1.35
UFD1-209ENST00000489406 SPRR2GQ9BYE4 73 aa6.61□□□□□ -1.35
UFD1-209ENST00000489406 H3BUT2 72 aa6.6□□□□□ -1.35
UFD1-209ENST00000489406 COX19Q49B96 90 aa6.6□□□□□ -1.35
UFD1-209ENST00000489406 FAM236AA0A1B0GUQ0 79 aa6.59□□□□□ -1.35
UFD1-209ENST00000489406 FAM236BA0A1B0GV22 79 aa6.59□□□□□ -1.35
UFD1-209ENST00000489406 SERF1AO75920 110 aa6.58□□□□□ -1.36
UFD1-209ENST00000489406 Q6ZQY7 126 aa6.58□□□□□ -1.36
UFD1-209ENST00000489406 A0A087WSZ3 146 aa6.57□□□□□ -1.36
UFD1-209ENST00000489406 A6NDN8 102 aa6.57□□□□□ -1.36
UFD1-209ENST00000489406 S100PP25815 95 aa6.57□□□□□ -1.36
UFD1-209ENST00000489406 H1FX-AS1Q4G0G2 97 aa6.57□□□□□ -1.36
UFD1-209ENST00000489406 ZCCHC13Q8WW36 166 aaKnown RBP6.56□□□□□ -1.36
UFD1-209ENST00000489406 PLNP26678 52 aa6.54□□□□□ -1.36
UFD1-209ENST00000489406 PET117Q6UWS5 81 aa6.54□□□□□ -1.36
UFD1-209ENST00000489406 IGKV4-1P06312 121 aa6.52□□□□□ -1.37
UFD1-209ENST00000489406 TEN1Q86WV5 123 aa6.52□□□□□ -1.37
UFD1-209ENST00000489406 PMCHL2Q9BQD1 86 aa6.52□□□□□ -1.37
UFD1-209ENST00000489406 TIMM17BO60830 172 aa6.51□□□□□ -1.37
UFD1-209ENST00000489406 TRAPPC1Q9Y5R8 145 aa6.51□□□□□ -1.37
UFD1-209ENST00000489406 DPM2O94777 84 aa6.5□□□□□ -1.37
UFD1-209ENST00000489406 LINC00575Q6W349 94 aa6.5□□□□□ -1.37
UFD1-209ENST00000489406 SMIM11BQ8TCY0 68 aa6.5□□□□□ -1.37
UFD1-209ENST00000489406 SNHG12Q9BXW3 62 aa6.5□□□□□ -1.37
UFD1-209ENST00000489406 IGHV6-1A0A0B4J1U7 121 aa6.48□□□□□ -1.37
UFD1-209ENST00000489406 hADV29S1A0JD25 119 aa6.48□□□□□ -1.37
UFD1-209ENST00000489406 CHCHD1Q96BP2 118 aaKnown RBP6.48□□□□□ -1.37
UFD1-209ENST00000489406 IGKCP01834 107 aa6.47□□□□□ -1.37
UFD1-209ENST00000489406 E9PLD3 99 aa6.46□□□□□ -1.38
UFD1-209ENST00000489406 VAMP3Q15836 100 aa6.43□□□□□ -1.38
UFD1-209ENST00000489406 DEFB116Q30KQ4 102 aa6.43□□□□□ -1.38
UFD1-209ENST00000489406 HSBP1O75506 76 aa6.41□□□□□ -1.38
UFD1-209ENST00000489406 HSPB8Q9UJY1 196 aa6.41□□□□□ -1.38
UFD1-209ENST00000489406 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP6.4□□□□□ -1.38
UFD1-209ENST00000489406 PPDPFLQ8WWR9 84 aa6.4□□□□□ -1.38
UFD1-209ENST00000489406 C3orf79P0CE67 100 aa6.39□□□□□ -1.39
UFD1-209ENST00000489406 HMCN1Q96RW7 5635 aa6.39□□□□□ -1.39
UFD1-209ENST00000489406 LEPROTL1O95214 131 aa6.38□□□□□ -1.39
UFD1-209ENST00000489406 TTTY13Q9BZ97 58 aa6.37□□□□□ -1.39
UFD1-209ENST00000489406 AHNAK2Q8IVF2 5795 aa6.37□□□□□ -1.39
UFD1-209ENST00000489406 C5orf47Q569G3 176 aa6.36□□□□□ -1.39
UFD1-209ENST00000489406 LCE5AQ5TCM9 118 aa6.36□□□□□ -1.39
UFD1-209ENST00000489406 KRTAP5-10Q6L8G5 202 aa6.35□□□□□ -1.39
UFD1-209ENST00000489406 KRTAP4-2Q9BYR5 136 aa6.35□□□□□ -1.39
UFD1-209ENST00000489406 S100A1P23297 94 aa6.34□□□□□ -1.39
UFD1-209ENST00000489406 C8orf87E5RJ46 101 aa6.33□□□□□ -1.4
UFD1-209ENST00000489406 NDUFA5Q16718 116 aa6.33□□□□□ -1.4
UFD1-209ENST00000489406 KRTAP4-11Q9BYQ6 195 aa6.33□□□□□ -1.4
UFD1-209ENST00000489406 LYRM7Q5U5X0 104 aa6.32□□□□□ -1.4
UFD1-209ENST00000489406 COPS9Q8WXC6 57 aa6.32□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 82.4 ms