RNA–Protein interactions for RNA: ENST00000489053.1

HDAC6-232, Transcript of histone deacetylase 6, humanhuman

TSL 4

Gene HDAC6, Length 539 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-232ENST00000489053 Q6JHZ5 121 aa5.09□□□□□ -1.59
HDAC6-232ENST00000489053 LINC01547P58512 204 aaPredicted RBP5.08□□□□□ -1.6
HDAC6-232ENST00000489053 ASB16-AS1Q495Z4 193 aa5.08□□□□□ -1.6
HDAC6-232ENST00000489053 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP5.08□□□□□ -1.6
HDAC6-232ENST00000489053 SMIM29Q86T20 159 aa5.08□□□□□ -1.6
HDAC6-232ENST00000489053 HIGD1BQ9P298 99 aa5.08□□□□□ -1.6
HDAC6-232ENST00000489053 C9orf92A6NGG3 77 aa5.07□□□□□ -1.6
HDAC6-232ENST00000489053 GHRHP01286 108 aa5.07□□□□□ -1.6
HDAC6-232ENST00000489053 PPDPFLQ8WWR9 84 aa5.07□□□□□ -1.6
HDAC6-232ENST00000489053 H0YGX0 51 aa5.06□□□□□ -1.6
HDAC6-232ENST00000489053 A0A0B4J2C4 111 aa5.05□□□□□ -1.6
HDAC6-232ENST00000489053 A0A0G2JQZ4 141 aa5.05□□□□□ -1.6
HDAC6-232ENST00000489053 OCIAD2Q56VL3 154 aa5.05□□□□□ -1.6
HDAC6-232ENST00000489053 XP32Q5T750 250 aa5.05□□□□□ -1.6
HDAC6-232ENST00000489053 Q5XG85 94 aa5.05□□□□□ -1.6
HDAC6-232ENST00000489053 CLEC2BQ92478 149 aa5.05□□□□□ -1.6
HDAC6-232ENST00000489053 CFC1BP0CG36 223 aa5.04□□□□□ -1.6
HDAC6-232ENST00000489053 CFC1P0CG37 223 aa5.04□□□□□ -1.6
HDAC6-232ENST00000489053 CEND1Q8N111 149 aa5.04□□□□□ -1.6
HDAC6-232ENST00000489053 PRO1854Q9UHT4 67 aa5.04□□□□□ -1.6
HDAC6-232ENST00000489053 FAT4Q6V0I7 4981 aa5.04□□□□□ -1.6
HDAC6-232ENST00000489053 PYY3Q5JQD4 70 aa5.03□□□□□ -1.6
HDAC6-232ENST00000489053 C1orf195Q5TG92 126 aa5.03□□□□□ -1.6
HDAC6-232ENST00000489053 LOC105371267A0A1B0GV96 52 aa5.02□□□□□ -1.61
HDAC6-232ENST00000489053 DNAL4O96015 105 aa5.02□□□□□ -1.61
HDAC6-232ENST00000489053 FABP2P12104 132 aa5.02□□□□□ -1.61
HDAC6-232ENST00000489053 PSMB2P49721 201 aa5.02□□□□□ -1.61
HDAC6-232ENST00000489053 C2orf91Q6ZV80 131 aa5.02□□□□□ -1.61
HDAC6-232ENST00000489053 TRBV7-7A0A0K0K1E9 115 aa5.01□□□□□ -1.61
HDAC6-232ENST00000489053 H3BUT2 72 aa5.01□□□□□ -1.61
HDAC6-232ENST00000489053 IGFL1Q6UW32 110 aa5.01□□□□□ -1.61
HDAC6-232ENST00000489053 SS18L2Q9UHA2 77 aa5.01□□□□□ -1.61
HDAC6-232ENST00000489053 IGLV8-61A0A075B6I0 122 aa5□□□□□ -1.61
HDAC6-232ENST00000489053 COX6CP09669 75 aa5□□□□□ -1.61
HDAC6-232ENST00000489053 HSD52Q0P140 79 aa5□□□□□ -1.61
HDAC6-232ENST00000489053 PCOTHQ58A44 107 aa5□□□□□ -1.61
HDAC6-232ENST00000489053 A0A1B0GX51 115 aa4.99□□□□□ -1.61
HDAC6-232ENST00000489053 LST1O00453 97 aa4.99□□□□□ -1.61
HDAC6-232ENST00000489053 SMIM6P0DI80 62 aa4.99□□□□□ -1.61
HDAC6-232ENST00000489053 NDUFV3P56181 108 aaKnown RBP4.99□□□□□ -1.61
HDAC6-232ENST00000489053 FXYD2P54710 66 aa4.98□□□□□ -1.61
HDAC6-232ENST00000489053 UQCR10Q9UDW1 63 aa4.98□□□□□ -1.61
HDAC6-232ENST00000489053 H3BMG7 143 aa4.97□□□□□ -1.61
HDAC6-232ENST00000489053 H3BQ85 93 aa4.97□□□□□ -1.61
HDAC6-232ENST00000489053 TRIAP1O43715 76 aa4.96□□□□□ -1.62
HDAC6-232ENST00000489053 FAM218AQ96MZ4 157 aa4.96□□□□□ -1.62
HDAC6-232ENST00000489053 ORMDL1Q9P0S3 153 aa4.96□□□□□ -1.62
HDAC6-232ENST00000489053 K7ERJ3 54 aa4.95□□□□□ -1.62
HDAC6-232ENST00000489053 SCGB1C2P0DMR2 95 aa4.95□□□□□ -1.62
HDAC6-232ENST00000489053 TEN1Q86WV5 123 aa4.95□□□□□ -1.62
HDAC6-232ENST00000489053 A0A1B0GV72 72 aa4.94□□□□□ -1.62
HDAC6-232ENST00000489053 OBSCN-AS1Q96MR7 158 aa4.94□□□□□ -1.62
HDAC6-232ENST00000489053 A0A087WSZ3 146 aa4.93□□□□□ -1.62
HDAC6-232ENST00000489053 RPL37P61927 97 aaKnown RBP4.93□□□□□ -1.62
HDAC6-232ENST00000489053 Q6Q795 121 aa4.93□□□□□ -1.62
HDAC6-232ENST00000489053 ATP11AUNQ6ZP68 121 aa4.93□□□□□ -1.62
HDAC6-232ENST00000489053 ANKRD29Q8N6D5 301 aa4.93□□□□□ -1.62
HDAC6-232ENST00000489053 TMEM256-PLSCR3K7ERE1 68 aa4.92□□□□□ -1.62
HDAC6-232ENST00000489053 LCE2AQ5TA79 106 aaPredicted RBP4.92□□□□□ -1.62
HDAC6-232ENST00000489053 COX6B2Q6YFQ2 88 aa4.92□□□□□ -1.62
HDAC6-232ENST00000489053 SIGMAR1Q99720 223 aa4.92□□□□□ -1.62
HDAC6-232ENST00000489053 KRTAP4-1Q9BYQ7 146 aa4.92□□□□□ -1.62
HDAC6-232ENST00000489053 TSTD3H0UI37 97 aa4.9□□□□□ -1.63
HDAC6-232ENST00000489053 Q96NJ1 140 aa4.9□□□□□ -1.63
HDAC6-232ENST00000489053 M0R143 59 aa4.89□□□□□ -1.63
HDAC6-232ENST00000489053 TRACP01848 142 aa4.89□□□□□ -1.63
HDAC6-232ENST00000489053 VPS25Q9BRG1 176 aa4.89□□□□□ -1.63
HDAC6-232ENST00000489053 TRBV7-4A0A0J9YYF1 115 aa4.87□□□□□ -1.63
HDAC6-232ENST00000489053 CCKP06307 115 aa4.87□□□□□ -1.63
HDAC6-232ENST00000489053 DSCR8Q96T75 97 aa4.87□□□□□ -1.63
HDAC6-232ENST00000489053 M0R2T5 61 aa4.86□□□□□ -1.63
HDAC6-232ENST00000489053 IGKV4-1P06312 121 aa4.86□□□□□ -1.63
HDAC6-232ENST00000489053 UBE2V1Q13404 147 aa4.86□□□□□ -1.63
HDAC6-232ENST00000489053 Q75L30 129 aa4.86□□□□□ -1.63
HDAC6-232ENST00000489053 A0A1W2PNM2 257 aa4.85□□□□□ -1.63
HDAC6-232ENST00000489053 RBM3P98179 157 aaKnown RBP4.85□□□□□ -1.63
HDAC6-232ENST00000489053 C21orf62-AS1Q17RA5 79 aa4.84□□□□□ -1.63
HDAC6-232ENST00000489053 KRTAP9-2Q9BYQ4 174 aa4.84□□□□□ -1.63
HDAC6-232ENST00000489053 BAALC-AS2P0C853 105 aa4.83□□□□□ -1.64
HDAC6-232ENST00000489053 DSCR10P59022 87 aa4.83□□□□□ -1.64
HDAC6-232ENST00000489053 LINC00313P59037 77 aa4.83□□□□□ -1.64
HDAC6-232ENST00000489053 ATXN8Q156A1 80 aa4.83□□□□□ -1.64
HDAC6-232ENST00000489053 LYRM7Q5U5X0 104 aa4.83□□□□□ -1.64
HDAC6-232ENST00000489053 TRBV20-1A0A075B6N2 111 aa4.82□□□□□ -1.64
HDAC6-232ENST00000489053 C9JAW5 83 aa4.82□□□□□ -1.64
HDAC6-232ENST00000489053 IGHV6-1A0A0B4J1U7 121 aa4.81□□□□□ -1.64
HDAC6-232ENST00000489053 PCP4L1A6NKN8 68 aa4.8□□□□□ -1.64
HDAC6-232ENST00000489053 BATFQ16520 125 aa4.8□□□□□ -1.64
HDAC6-232ENST00000489053 DEFB116Q30KQ4 102 aa4.8□□□□□ -1.64
HDAC6-232ENST00000489053 A8MUU9 505 aa4.79□□□□□ -1.64
HDAC6-232ENST00000489053 C20orf166-AS1Q96NR2 134 aa4.79□□□□□ -1.64
HDAC6-232ENST00000489053 NAA38Q9BRA0 125 aaKnown RBP4.79□□□□□ -1.64
HDAC6-232ENST00000489053 JMJD7-PLA2G4BH0Y9G9 81 aa4.78□□□□□ -1.64
HDAC6-232ENST00000489053 MT1HP80294 61 aa4.78□□□□□ -1.64
HDAC6-232ENST00000489053 LCE2CQ5TA81 110 aa4.78□□□□□ -1.64
HDAC6-232ENST00000489053 J3KT08 172 aa4.77□□□□□ -1.65
HDAC6-232ENST00000489053 NDUFB1O75438 58 aa4.77□□□□□ -1.65
HDAC6-232ENST00000489053 PDE6GP18545 87 aa4.77□□□□□ -1.65
HDAC6-232ENST00000489053 FAM236DA0A1B0GTK5 79 aa4.76□□□□□ -1.65
HDAC6-232ENST00000489053 C8orf87E5RJ46 101 aa4.76□□□□□ -1.65
Retrieved 100 of 20,778 RNA–protein pairs in 68.5 ms