RNA–Protein interactions for RNA: ENST00000488249.1

RBM28-207, Transcript of RNA binding motif protein 28, humanhuman

TSL 3

Gene RBM28, Length 570 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBM28-207ENST00000488249 KAAG1Q9UBP8 84 aa1.12□□□□□ -2.23
RBM28-207ENST00000488249 APLNQ9ULZ1 77 aa1.12□□□□□ -2.23
RBM28-207ENST00000488249 PTPRQQ9UMZ3 2332 aa1.11□□□□□ -2.23
RBM28-207ENST00000488249 H3BUA1 57 aa1.11□□□□□ -2.23
RBM28-207ENST00000488249 DEFB130BP0DP73 79 aa1.11□□□□□ -2.23
RBM28-207ENST00000488249 DEFB130AP0DP74 79 aa1.11□□□□□ -2.23
RBM28-207ENST00000488249 WFDC13Q8IUB5 93 aa1.11□□□□□ -2.23
RBM28-207ENST00000488249 RPL39P62891 51 aaKnown RBP1.1□□□□□ -2.23
RBM28-207ENST00000488249 DEFB110Q30KQ9 67 aa1.1□□□□□ -2.23
RBM28-207ENST00000488249 Q5VSD8 79 aa1.1□□□□□ -2.23
RBM28-207ENST00000488249 DEFB105AQ8NG35 78 aa1.1□□□□□ -2.23
RBM28-207ENST00000488249 RPL39LQ96EH5 51 aaKnown RBP1.1□□□□□ -2.23
RBM28-207ENST00000488249 PDE4DIPQ5VU43 2346 aa1.1□□□□□ -2.23
RBM28-207ENST00000488249 USF3Q68DE3 2245 aa1.09□□□□□ -2.23
RBM28-207ENST00000488249 WFDC10BQ8IUB3 73 aa1.09□□□□□ -2.23
RBM28-207ENST00000488249 SPRR1BP22528 89 aa1.08□□□□□ -2.24
RBM28-207ENST00000488249 DEFB108BQ8NET1 73 aa1.08□□□□□ -2.24
RBM28-207ENST00000488249 LEAP2Q969E1 77 aa1.08□□□□□ -2.24
RBM28-207ENST00000488249 KRTAP4-1Q9BYQ7 146 aa1.08□□□□□ -2.24
RBM28-207ENST00000488249 TRANK1O15050 2925 aa1.08□□□□□ -2.24
RBM28-207ENST00000488249 RP1L1Q8IWN7 2480 aaPredicted RBP1.08□□□□□ -2.24
RBM28-207ENST00000488249 C2CD3Q4AC94 2353 aa1.07□□□□□ -2.24
RBM28-207ENST00000488249 WNK2Q9Y3S1 2297 aa1.07□□□□□ -2.24
RBM28-207ENST00000488249 IGLV5-48A0A075B6I7 105 aa1.07□□□□□ -2.24
RBM28-207ENST00000488249 A0A0D9SG42 100 aa1.07□□□□□ -2.24
RBM28-207ENST00000488249 DEFB131AP59861 70 aa1.07□□□□□ -2.24
RBM28-207ENST00000488249 DEFB133Q30KQ1 61 aa1.07□□□□□ -2.24
RBM28-207ENST00000488249 RHPN1-AS1Q9BWJ2 59 aa1.07□□□□□ -2.24
RBM28-207ENST00000488249 TOMM7Q9P0U1 55 aa1.07□□□□□ -2.24
RBM28-207ENST00000488249 KNL1Q8NG31 2342 aa1.06□□□□□ -2.24
RBM28-207ENST00000488249 H3BUX3 64 aa1.06□□□□□ -2.24
RBM28-207ENST00000488249 PKDREJQ9NTG1 2253 aa1.06□□□□□ -2.24
RBM28-207ENST00000488249 ROS1P08922 2347 aa1.06□□□□□ -2.24
RBM28-207ENST00000488249 IGF2RP11717 2491 aa1.06□□□□□ -2.24
RBM28-207ENST00000488249 CHD8Q9HCK8 2581 aa1.05□□□□□ -2.24
RBM28-207ENST00000488249 USP24Q9UPU5 2620 aa1.05□□□□□ -2.24
RBM28-207ENST00000488249 ZNF462Q96JM2 2506 aa1.05□□□□□ -2.24
RBM28-207ENST00000488249 APELAP0DMC3 54 aa1.05□□□□□ -2.24
RBM28-207ENST00000488249 FBN3Q75N90 2809 aa1.05□□□□□ -2.24
RBM28-207ENST00000488249 A8MTW9 85 aa1.04□□□□□ -2.24
RBM28-207ENST00000488249 DEFB109BQ30KR1 87 aa1.04□□□□□ -2.24
RBM28-207ENST00000488249 SPTBN2O15020 2390 aa1.04□□□□□ -2.24
RBM28-207ENST00000488249 PTPN13Q12923 2485 aa1.04□□□□□ -2.24
RBM28-207ENST00000488249 HTN1P15515 57 aa1.03□□□□□ -2.24
RBM28-207ENST00000488249 PCNX1Q96RV3 2341 aa1.03□□□□□ -2.25
RBM28-207ENST00000488249 TPRP12270 2363 aaKnown RBP1.03□□□□□ -2.25
RBM28-207ENST00000488249 MMP24-AS1A0A0U1RRL7 71 aa1.02□□□□□ -2.25
RBM28-207ENST00000488249 SPTBN1Q01082 2364 aaKnown RBP1.02□□□□□ -2.25
RBM28-207ENST00000488249 TEP1Q99973 2627 aaKnown RBP1.02□□□□□ -2.25
RBM28-207ENST00000488249 CACNA1HO95180 2353 aa1.01□□□□□ -2.25
RBM28-207ENST00000488249 FCGBPQ9Y6R7 5405 aaPredicted RBP1.01□□□□□ -2.25
RBM28-207ENST00000488249 USP9XQ93008 2570 aaPredicted RBP1.01□□□□□ -2.25
RBM28-207ENST00000488249 KRTAP21-3Q3LHN1 58 aa1.01□□□□□ -2.25
RBM28-207ENST00000488249 LRRK2Q5S007 2527 aa1.01□□□□□ -2.25
RBM28-207ENST00000488249 DEFB104AQ8WTQ1 72 aa1□□□□□ -2.25
RBM28-207ENST00000488249 S4R3F8 94 aa1□□□□□ -2.25
RBM28-207ENST00000488249 NAV2Q8IVL1 2488 aa1□□□□□ -2.25
RBM28-207ENST00000488249 SETXQ7Z333 2677 aaKnown RBP1□□□□□ -2.25
RBM28-207ENST00000488249 ASH1LQ9NR48 2969 aaKnown RBP0.99□□□□□ -2.25
RBM28-207ENST00000488249 ABCA2Q9BZC7 2435 aa0.99□□□□□ -2.25
RBM28-207ENST00000488249 MAST4O15021 2626 aa0.99□□□□□ -2.25
RBM28-207ENST00000488249 H3BNG1 76 aa0.99□□□□□ -2.25
RBM28-207ENST00000488249 KRTAP10-4P60372 401 aaPredicted RBP0.99□□□□□ -2.25
RBM28-207ENST00000488249 PRLHP81277 87 aa0.99□□□□□ -2.25
RBM28-207ENST00000488249 NOP10Q9NPE3 64 aaKnown RBP0.99□□□□□ -2.25
RBM28-207ENST00000488249 REV3LO60673 3130 aa0.99□□□□□ -2.25
RBM28-207ENST00000488249 ANKRD11Q6UB99 2663 aaPredicted RBP0.98□□□□□ -2.25
RBM28-207ENST00000488249 GVINP1Q7Z2Y8 2422 aa0.98□□□□□ -2.25
RBM28-207ENST00000488249 CSPG4Q6UVK1 2322 aa0.98□□□□□ -2.25
RBM28-207ENST00000488249 U3KQA8 63 aa0.97□□□□□ -2.25
RBM28-207ENST00000488249 SETD2Q9BYW2 2564 aaPredicted RBP0.97□□□□□ -2.25
RBM28-207ENST00000488249 TENM1Q9UKZ4 2725 aa0.96□□□□□ -2.26
RBM28-207ENST00000488249 SPART-AS1P0CW21 52 aa0.96□□□□□ -2.26
RBM28-207ENST00000488249 DEFB1P60022 68 aa0.96□□□□□ -2.26
RBM28-207ENST00000488249 CLPSL2Q6UWE3 100 aa0.96□□□□□ -2.26
RBM28-207ENST00000488249 PIEZO1Q92508 2521 aa0.96□□□□□ -2.26
RBM28-207ENST00000488249 TTC28Q96AY4 2481 aa0.96□□□□□ -2.26
RBM28-207ENST00000488249 ABCA12Q86UK0 2595 aa0.95□□□□□ -2.26
RBM28-207ENST00000488249 ANKHD1Q8IWZ3 2542 aaKnown RBP0.95□□□□□ -2.26
RBM28-207ENST00000488249 DSPP15924 2871 aaKnown RBP0.95□□□□□ -2.26
RBM28-207ENST00000488249 DOPEY1Q5JWR5 2465 aa0.95□□□□□ -2.26
RBM28-207ENST00000488249 FLNBO75369 2602 aaKnown RBP0.95□□□□□ -2.26
RBM28-207ENST00000488249 NOTCH1P46531 2555 aa0.95□□□□□ -2.26
RBM28-207ENST00000488249 NCOR2Q9Y618 2525 aa0.94□□□□□ -2.26
RBM28-207ENST00000488249 HELZ2Q9BYK8 2649 aaKnown RBP0.94□□□□□ -2.26
RBM28-207ENST00000488249 F8P00451 2351 aa0.94□□□□□ -2.26
RBM28-207ENST00000488249 ITPR3Q14573 2671 aa0.94□□□□□ -2.26
RBM28-207ENST00000488249 HECTD1Q9ULT8 2610 aa0.94□□□□□ -2.26
RBM28-207ENST00000488249 MEGF8Q7Z7M0 2845 aa0.93□□□□□ -2.26
RBM28-207ENST00000488249 BDP1A6H8Y1 2624 aa0.93□□□□□ -2.26
RBM28-207ENST00000488249 LINC01556Q5JQF7 62 aa0.93□□□□□ -2.26
RBM28-207ENST00000488249 ZNF292O60281 2723 aa0.93□□□□□ -2.26
RBM28-207ENST00000488249 POLQO75417 2590 aa0.93□□□□□ -2.26
RBM28-207ENST00000488249 EPG5Q9HCE0 2579 aa0.93□□□□□ -2.26
RBM28-207ENST00000488249 MAP1BP46821 2468 aaKnown RBP0.92□□□□□ -2.26
RBM28-207ENST00000488249 FAM186AA6NE01 2351 aa0.92□□□□□ -2.26
RBM28-207ENST00000488249 CCDC168Q8NDH2 2452 aa0.92□□□□□ -2.26
RBM28-207ENST00000488249 FASNP49327 2511 aaKnown RBP0.91□□□□□ -2.26
RBM28-207ENST00000488249 SPTBN4Q9H254 2564 aa0.91□□□□□ -2.26
RBM28-207ENST00000488249 CELSR2Q9HCU4 2923 aa0.91□□□□□ -2.26
Retrieved 100 of 20,778 RNA–protein pairs in 60.9 ms