RNA–Protein interactions for RNA: ENST00000486960.5

SF1-217, Transcript of splicing factor 1, humanhuman

TSL 2

Gene SF1, Length 719 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF1-217ENST00000486960 TRBV10-1A0A0K0K1A3 114 aa3.44□□□□□ -1.86
SF1-217ENST00000486960 C2orf70A6NJV1 201 aa3.44□□□□□ -1.86
SF1-217ENST00000486960 IGKV1-17P01599 117 aa3.44□□□□□ -1.86
SF1-217ENST00000486960 CFC1P0CG37 223 aa3.44□□□□□ -1.86
SF1-217ENST00000486960 UBE2D1P51668 147 aa3.44□□□□□ -1.86
SF1-217ENST00000486960 CDC42SE2Q9NRR3 84 aa3.44□□□□□ -1.86
SF1-217ENST00000486960 CTSGP08311 255 aa3.43□□□□□ -1.86
SF1-217ENST00000486960 ATXN8Q156A1 80 aa3.43□□□□□ -1.86
SF1-217ENST00000486960 LPAP08519 4548 aa3.43□□□□□ -1.86
SF1-217ENST00000486960 IGLV2-18A0A075B6J9 118 aa3.42□□□□□ -1.86
SF1-217ENST00000486960 IGHV3OR16-8A0A075B7F1 116 aa3.42□□□□□ -1.86
SF1-217ENST00000486960 TMSB15BA0A087X1C1 80 aa3.42□□□□□ -1.86
SF1-217ENST00000486960 A0A0J9YWU9 116 aa3.42□□□□□ -1.86
SF1-217ENST00000486960 A0A0J9YX75 114 aa3.42□□□□□ -1.86
SF1-217ENST00000486960 P0C880 135 aa3.42□□□□□ -1.86
SF1-217ENST00000486960 ELOF1P60002 83 aaKnown RBP3.42□□□□□ -1.86
SF1-217ENST00000486960 LINC00483Q53H64 154 aa3.42□□□□□ -1.86
SF1-217ENST00000486960 V9GYV3 84 aa3.42□□□□□ -1.86
SF1-217ENST00000486960 TRBV6-8A0A0A6YYG3 113 aa3.41□□□□□ -1.86
SF1-217ENST00000486960 LOC101927531A0A1B0GV80 90 aa3.41□□□□□ -1.86
SF1-217ENST00000486960 A0A1W2PNM2 257 aa3.41□□□□□ -1.86
SF1-217ENST00000486960 SMIM27A0A1W2PRY6 76 aa3.41□□□□□ -1.86
SF1-217ENST00000486960 H3BUA1 57 aa3.41□□□□□ -1.86
SF1-217ENST00000486960 LEPROTL1O95214 131 aa3.41□□□□□ -1.86
SF1-217ENST00000486960 DEFB136Q30KP8 78 aa3.41□□□□□ -1.86
SF1-217ENST00000486960 HIGD1CA8MV81 97 aa3.4□□□□□ -1.87
SF1-217ENST00000486960 Q5VSD8 79 aa3.4□□□□□ -1.87
SF1-217ENST00000486960 LYPD1Q8N2G4 141 aa3.4□□□□□ -1.87
SF1-217ENST00000486960 DMAC1Q96GE9 116 aa3.4□□□□□ -1.87
SF1-217ENST00000486960 USMG5Q96IX5 58 aa3.4□□□□□ -1.87
SF1-217ENST00000486960 UBE2D4Q9Y2X8 147 aa3.4□□□□□ -1.87
SF1-217ENST00000486960 LENEPQ9Y5L5 61 aa3.4□□□□□ -1.87
SF1-217ENST00000486960 NACAE9PAV3 2078 aa3.4□□□□□ -1.87
SF1-217ENST00000486960 GAS8-AS1O95177 125 aa3.39□□□□□ -1.87
SF1-217ENST00000486960 IGHV3-33P01772 117 aa3.39□□□□□ -1.87
SF1-217ENST00000486960 ARMS2P0C7Q2 107 aa3.39□□□□□ -1.87
SF1-217ENST00000486960 KRTAP26-1Q6PEX3 210 aa3.39□□□□□ -1.87
SF1-217ENST00000486960 LINC00167Q96N53 147 aa3.39□□□□□ -1.87
SF1-217ENST00000486960 KLK12Q9UKR0 248 aa3.39□□□□□ -1.87
SF1-217ENST00000486960 KRTAP29-1A8MX34 341 aaPredicted RBP3.38□□□□□ -1.87
SF1-217ENST00000486960 D6R8Y8 96 aa3.38□□□□□ -1.87
SF1-217ENST00000486960 H3BRN7 92 aa3.38□□□□□ -1.87
SF1-217ENST00000486960 PSCAO43653 123 aa3.38□□□□□ -1.87
SF1-217ENST00000486960 C1orf137Q5JT78 98 aa3.38□□□□□ -1.87
SF1-217ENST00000486960 C10orf113Q5VZT2 155 aa3.38□□□□□ -1.87
SF1-217ENST00000486960 CSAG1Q6PB30 78 aa3.38□□□□□ -1.87
SF1-217ENST00000486960 MUSTN1Q8IVN3 82 aa3.38□□□□□ -1.87
SF1-217ENST00000486960 C4orf3Q8WVX3 66 aa3.38□□□□□ -1.87
SF1-217ENST00000486960 HIGD2AQ9BW72 106 aa3.38□□□□□ -1.87
SF1-217ENST00000486960 NDUFA4O00483 81 aa3.37□□□□□ -1.87
SF1-217ENST00000486960 ARL14EPLP0DKL9 152 aa3.37□□□□□ -1.87
SF1-217ENST00000486960 KRTAP10-2P60368 255 aa3.37□□□□□ -1.87
SF1-217ENST00000486960 KRTAP25-1Q3LHN0 102 aa3.37□□□□□ -1.87
SF1-217ENST00000486960 Q8N9P0 234 aaPredicted RBP3.37□□□□□ -1.87
SF1-217ENST00000486960 IGLV4-69A0A075B6H9 119 aa3.36□□□□□ -1.87
SF1-217ENST00000486960 A8MU10 97 aa3.36□□□□□ -1.87
SF1-217ENST00000486960 LCE5AQ5TCM9 118 aa3.36□□□□□ -1.87
SF1-217ENST00000486960 GDF5OSQ5U4N7 250 aa3.36□□□□□ -1.87
SF1-217ENST00000486960 ORMDL1Q9P0S3 153 aa3.36□□□□□ -1.87
SF1-217ENST00000486960 SSPOA2VEC9 5147 aa3.36□□□□□ -1.87
SF1-217ENST00000486960 DNAH8Q96JB1 4490 aa3.35□□□□□ -1.87
SF1-217ENST00000486960 PPP1R17O96001 155 aa3.35□□□□□ -1.87
SF1-217ENST00000486960 IGKV2-30P06310 120 aa3.35□□□□□ -1.87
SF1-217ENST00000486960 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa3.35□□□□□ -1.87
SF1-217ENST00000486960 Q86TA4 180 aa3.35□□□□□ -1.87
SF1-217ENST00000486960 RHPN1-AS1Q9BWJ2 59 aa3.35□□□□□ -1.87
SF1-217ENST00000486960 KRTAP9-3Q9BYQ3 159 aa3.35□□□□□ -1.87
SF1-217ENST00000486960 TMEM14CQ9P0S9 112 aa3.35□□□□□ -1.87
SF1-217ENST00000486960 IGKV3-7A0A075B6H7 116 aa3.34□□□□□ -1.87
SF1-217ENST00000486960 NUPR2A6NF83 97 aa3.34□□□□□ -1.87
SF1-217ENST00000486960 DEFB1P60022 68 aa3.34□□□□□ -1.87
SF1-217ENST00000486960 PDE6HQ13956 83 aa3.34□□□□□ -1.87
SF1-217ENST00000486960 AMELXQ99217 191 aa3.34□□□□□ -1.87
SF1-217ENST00000486960 PRR15LQ9BU68 103 aa3.34□□□□□ -1.87
SF1-217ENST00000486960 A0A0J9YY99 117 aa3.33□□□□□ -1.88
SF1-217ENST00000486960 M0R3E3 92 aa3.33□□□□□ -1.88
SF1-217ENST00000486960 IGHV3-30P01768 117 aa3.33□□□□□ -1.88
SF1-217ENST00000486960 IGHV3-30-5P0DP03 117 aa3.33□□□□□ -1.88
SF1-217ENST00000486960 SPAG11BQ08648 103 aa3.33□□□□□ -1.88
SF1-217ENST00000486960 DEFB114Q30KQ6 69 aa3.33□□□□□ -1.88
SF1-217ENST00000486960 FAM74A4Q5TZK3 123 aa3.33□□□□□ -1.88
SF1-217ENST00000486960 SPAG11AQ6PDA7 123 aa3.33□□□□□ -1.88
SF1-217ENST00000486960 KRTAP4-11Q9BYQ6 195 aa3.33□□□□□ -1.88
SF1-217ENST00000486960 GFRA4Q9GZZ7 299 aa3.33□□□□□ -1.88
SF1-217ENST00000486960 TMEM167BQ9NRX6 74 aa3.33□□□□□ -1.88
SF1-217ENST00000486960 LINC01546A6NGU7 62 aa3.32□□□□□ -1.88
SF1-217ENST00000486960 ZNF861PO60384 105 aa3.32□□□□□ -1.88
SF1-217ENST00000486960 C9orf163Q8N9P6 203 aa3.32□□□□□ -1.88
SF1-217ENST00000486960 PSORS1C2Q9UIG4 136 aa3.32□□□□□ -1.88
SF1-217ENST00000486960 IGKV2-40A0A087WW87 121 aaPredicted RBP3.31□□□□□ -1.88
SF1-217ENST00000486960 TRBV7-4A0A0J9YYF1 115 aa3.31□□□□□ -1.88
SF1-217ENST00000486960 LINC01549A6NIU2 74 aa3.31□□□□□ -1.88
SF1-217ENST00000486960 IGKV2D-40P01614 121 aaPredicted RBP3.31□□□□□ -1.88
SF1-217ENST00000486960 CNBPP62633 177 aaKnown RBP3.31□□□□□ -1.88
SF1-217ENST00000486960 Q9BRP9 147 aa3.31□□□□□ -1.88
SF1-217ENST00000486960 TRBV6-5A0A0K0K1A5 114 aa3.3□□□□□ -1.88
SF1-217ENST00000486960 TRBV6-1A0A0K0K1D8 114 aa3.3□□□□□ -1.88
SF1-217ENST00000486960 SPINT4Q6UDR6 99 aa3.3□□□□□ -1.88
SF1-217ENST00000486960 WFDC10AQ9H1F0 79 aa3.3□□□□□ -1.88
SF1-217ENST00000486960 PRR34Q9NV39 138 aa3.3□□□□□ -1.88
Retrieved 100 of 20,778 RNA–protein pairs in 78.5 ms