RNA–Protein interactions for RNA: ENST00000486901.1

HSPG2-211, Transcript of heparan sulfate proteoglycan 2, humanhuman

TSL 2

Gene HSPG2, Length 3,586 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HSPG2-211ENST00000486901 DHRS4-AS1Q9P1J3 65 aa7.89□□□□□ -1.15
HSPG2-211ENST00000486901 LINC00588Q9Y4M8 146 aa7.89□□□□□ -1.15
HSPG2-211ENST00000486901 ATP5EP56381 51 aaPredicted RBP7.87□□□□□ -1.15
HSPG2-211ENST00000486901 hDV103S1A0JD37 113 aa7.87□□□□□ -1.15
HSPG2-211ENST00000486901 HCG22E2RYF7 251 aa7.87□□□□□ -1.15
HSPG2-211ENST00000486901 IGFL1Q6UW32 110 aa7.87□□□□□ -1.15
HSPG2-211ENST00000486901 A8MUN3 132 aa7.86□□□□□ -1.15
HSPG2-211ENST00000486901 KRTAP4-16G5E9R7 235 aaPredicted RBP7.85□□□□□ -1.15
HSPG2-211ENST00000486901 REG3GQ6UW15 175 aa7.85□□□□□ -1.15
HSPG2-211ENST00000486901 SEC61GP60059 68 aa7.84□□□□□ -1.15
HSPG2-211ENST00000486901 TNP2Q05952 138 aa7.84□□□□□ -1.15
HSPG2-211ENST00000486901 TRAV22A0A0B4J277 110 aa7.82□□□□□ -1.16
HSPG2-211ENST00000486901 KRTAP11-1Q8IUC1 163 aa7.81□□□□□ -1.16
HSPG2-211ENST00000486901 UBE2AP49459 152 aa7.81□□□□□ -1.16
HSPG2-211ENST00000486901 PHF5AQ7RTV0 110 aaKnown RBP7.81□□□□□ -1.16
HSPG2-211ENST00000486901 H0Y9J4 135 aa7.81□□□□□ -1.16
HSPG2-211ENST00000486901 PCOTHQ58A44 107 aa7.8□□□□□ -1.16
HSPG2-211ENST00000486901 DNAH10OSP0CZ25 163 aa7.79□□□□□ -1.16
HSPG2-211ENST00000486901 SPRR4Q96PI1 79 aa7.79□□□□□ -1.16
HSPG2-211ENST00000486901 MP68P56378 58 aa7.78□□□□□ -1.16
HSPG2-211ENST00000486901 SPRR1AP35321 89 aa7.78□□□□□ -1.16
HSPG2-211ENST00000486901 H0Y9P7 68 aa7.77□□□□□ -1.17
HSPG2-211ENST00000486901 SPTSSBQ8NFR3 76 aa7.77□□□□□ -1.17
HSPG2-211ENST00000486901 KRTAP1-5Q9BYS1 174 aa7.77□□□□□ -1.17
HSPG2-211ENST00000486901 H3BNG1 76 aa7.76□□□□□ -1.17
HSPG2-211ENST00000486901 ZCCHC13Q8WW36 166 aaKnown RBP7.76□□□□□ -1.17
HSPG2-211ENST00000486901 CASC2Q6XLA1 102 aa7.76□□□□□ -1.17
HSPG2-211ENST00000486901 IGLV9-49A0A0B4J1Y8 123 aa7.74□□□□□ -1.17
HSPG2-211ENST00000486901 CHKB-CPT1BH3BT56 60 aa7.74□□□□□ -1.17
HSPG2-211ENST00000486901 B9D2Q9BPU9 175 aa7.73□□□□□ -1.17
HSPG2-211ENST00000486901 PRR15LQ9BU68 103 aa7.72□□□□□ -1.17
HSPG2-211ENST00000486901 TLX1NBP0CAT3 122 aa7.72□□□□□ -1.17
HSPG2-211ENST00000486901 NDUFS5O43920 106 aa7.71□□□□□ -1.17
HSPG2-211ENST00000486901 ANAPC11Q9NYG5 84 aa7.71□□□□□ -1.18
HSPG2-211ENST00000486901 MDFIQ99750 246 aa7.71□□□□□ -1.18
HSPG2-211ENST00000486901 CNBPP62633 177 aaKnown RBP7.7□□□□□ -1.18
HSPG2-211ENST00000486901 K7EIL1 84 aa7.7□□□□□ -1.18
HSPG2-211ENST00000486901 LCE6AA0A183 80 aa7.7□□□□□ -1.18
HSPG2-211ENST00000486901 PMAIP1Q13794 54 aa7.69□□□□□ -1.18
HSPG2-211ENST00000486901 DNAH9Q9NYC9 4486 aa7.68□□□□□ -1.18
HSPG2-211ENST00000486901 F8WDY8 70 aa7.68□□□□□ -1.18
HSPG2-211ENST00000486901 PRR15Q8IV56 129 aa7.68□□□□□ -1.18
HSPG2-211ENST00000486901 PANO1I0J062 215 aa7.68□□□□□ -1.18
HSPG2-211ENST00000486901 Q1T7F1 81 aa7.68□□□□□ -1.18
HSPG2-211ENST00000486901 PLA2G2DQ9UNK4 145 aa7.68□□□□□ -1.18
HSPG2-211ENST00000486901 IGLV5-37A0A075B6J1 123 aa7.67□□□□□ -1.18
HSPG2-211ENST00000486901 Q5VV11 94 aa7.66□□□□□ -1.18
HSPG2-211ENST00000486901 SPAG11AQ6PDA7 123 aa7.65□□□□□ -1.19
HSPG2-211ENST00000486901 HUWE1Q7Z6Z7 4374 aaKnown RBP7.63□□□□□ -1.19
HSPG2-211ENST00000486901 IGHV6-1A0A0B4J1U7 121 aa7.63□□□□□ -1.19
HSPG2-211ENST00000486901 KRTAP29-1A8MX34 341 aaPredicted RBP7.63□□□□□ -1.19
HSPG2-211ENST00000486901 C16orf90A8MZG2 172 aa7.63□□□□□ -1.19
HSPG2-211ENST00000486901 LY6G6CO95867 125 aa7.63□□□□□ -1.19
HSPG2-211ENST00000486901 DNAH7Q8WXX0 4024 aa7.63□□□□□ -1.19
HSPG2-211ENST00000486901 A6NED7 52 aa7.63□□□□□ -1.19
HSPG2-211ENST00000486901 NDUFB1O75438 58 aa7.63□□□□□ -1.19
HSPG2-211ENST00000486901 CMYA5Q8N3K9 4069 aa7.63□□□□□ -1.19
HSPG2-211ENST00000486901 SPINK6Q6UWN8 80 aa7.62□□□□□ -1.19
HSPG2-211ENST00000486901 Q8N9P0 234 aaPredicted RBP7.61□□□□□ -1.19
HSPG2-211ENST00000486901 CYP4F30PQ9H0H9 118 aa7.61□□□□□ -1.19
HSPG2-211ENST00000486901 A0A1B0GW54 56 aa7.61□□□□□ -1.19
HSPG2-211ENST00000486901 A8MWP4 228 aa7.61□□□□□ -1.19
HSPG2-211ENST00000486901 COA5Q86WW8 74 aa7.6□□□□□ -1.19
HSPG2-211ENST00000486901 LINC00472Q9H8W2 130 aa7.59□□□□□ -1.19
HSPG2-211ENST00000486901 DNAH1Q9P2D7 4330 aa7.59□□□□□ -1.19
HSPG2-211ENST00000486901 RETNLBQ9BQ08 111 aa7.58□□□□□ -1.2
HSPG2-211ENST00000486901 A0A087X002 238 aa7.58□□□□□ -1.2
HSPG2-211ENST00000486901 NOTCH2NLQ7Z3S9 236 aa7.58□□□□□ -1.2
HSPG2-211ENST00000486901 MMP24-AS1A0A0U1RRL7 71 aa7.56□□□□□ -1.2
HSPG2-211ENST00000486901 CD164Q04900 197 aa7.56□□□□□ -1.2
HSPG2-211ENST00000486901 FRAS1Q86XX4 4008 aa7.55□□□□□ -1.2
HSPG2-211ENST00000486901 LCA10Q71F78 164 aa7.55□□□□□ -1.2
HSPG2-211ENST00000486901 FBN3Q75N90 2809 aa7.55□□□□□ -1.2
HSPG2-211ENST00000486901 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP7.54□□□□□ -1.2
HSPG2-211ENST00000486901 MOBPQ13875 183 aa7.53□□□□□ -1.2
HSPG2-211ENST00000486901 C9orf163Q8N9P6 203 aa7.51□□□□□ -1.21
HSPG2-211ENST00000486901 IGLV8-61A0A075B6I0 122 aa7.51□□□□□ -1.21
HSPG2-211ENST00000486901 PRR26Q8N8Z3 221 aa7.5□□□□□ -1.21
HSPG2-211ENST00000486901 CDK2AP2O75956 126 aa7.49□□□□□ -1.21
HSPG2-211ENST00000486901 LIMD2Q9BT23 127 aa7.48□□□□□ -1.21
HSPG2-211ENST00000486901 SPINK7P58062 85 aa7.48□□□□□ -1.21
HSPG2-211ENST00000486901 PLECQ15149 4684 aaKnown RBP7.47□□□□□ -1.21
HSPG2-211ENST00000486901 C8orf17Q9NRJ1 99 aa7.47□□□□□ -1.21
HSPG2-211ENST00000486901 SPANXA2-OT1Q8N9U9 137 aa7.46□□□□□ -1.22
HSPG2-211ENST00000486901 Q96NJ1 140 aa7.45□□□□□ -1.22
HSPG2-211ENST00000486901 IGLV7-46A0A075B6I9 117 aa7.44□□□□□ -1.22
HSPG2-211ENST00000486901 HRES1P13985 223 aa7.44□□□□□ -1.22
HSPG2-211ENST00000486901 CIRBP-AS1Q8TBR5 109 aa7.44□□□□□ -1.22
HSPG2-211ENST00000486901 MEGF8Q7Z7M0 2845 aa7.43□□□□□ -1.22
HSPG2-211ENST00000486901 Q5W150 140 aa7.42□□□□□ -1.22
HSPG2-211ENST00000486901 APLNQ9ULZ1 77 aa7.41□□□□□ -1.22
HSPG2-211ENST00000486901 LOC101927531A0A1B0GV80 90 aa7.41□□□□□ -1.22
HSPG2-211ENST00000486901 SPRR1BP22528 89 aa7.41□□□□□ -1.22
HSPG2-211ENST00000486901 DNAH3Q8TD57 4116 aa7.41□□□□□ -1.22
HSPG2-211ENST00000486901 PSORS1C2Q9UIG4 136 aa7.4□□□□□ -1.22
HSPG2-211ENST00000486901 NBDYA0A0U1RRE5 68 aa7.4□□□□□ -1.22
HSPG2-211ENST00000486901 A0A1B0GVX0 72 aa7.4□□□□□ -1.23
HSPG2-211ENST00000486901 H3BPC8 53 aa7.4□□□□□ -1.23
HSPG2-211ENST00000486901 C14orf177Q52M58 125 aa7.38□□□□□ -1.23
HSPG2-211ENST00000486901 MRPL34Q9BQ48 92 aaKnown RBP7.38□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 108.5 ms