RNA–Protein interactions for RNA: ENST00000486184.1

NUP50-216, Transcript of nucleoporin 50, humanhuman

TSL 3

Gene NUP50, Length 821 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP50-216ENST00000486184 DNAL4O96015 105 aa6.72□□□□□ -1.33
NUP50-216ENST00000486184 SPRR1BP22528 89 aa6.72□□□□□ -1.33
NUP50-216ENST00000486184 C3orf22Q8N5N4 141 aa6.72□□□□□ -1.33
NUP50-216ENST00000486184 FAT3Q8TDW7 4589 aa6.72□□□□□ -1.33
NUP50-216ENST00000486184 LRP1Q07954 4544 aaKnown RBP6.71□□□□□ -1.33
NUP50-216ENST00000486184 IGLV5-48A0A075B6I7 105 aa6.71□□□□□ -1.34
NUP50-216ENST00000486184 PCP4L1A6NKN8 68 aa6.71□□□□□ -1.34
NUP50-216ENST00000486184 MOBPQ13875 183 aa6.71□□□□□ -1.34
NUP50-216ENST00000486184 OCIAD2Q56VL3 154 aa6.71□□□□□ -1.34
NUP50-216ENST00000486184 CLEC2BQ92478 149 aa6.71□□□□□ -1.34
NUP50-216ENST00000486184 FAM218AQ96MZ4 157 aa6.71□□□□□ -1.34
NUP50-216ENST00000486184 KRTAP4-8Q9BYQ9 185 aa6.71□□□□□ -1.34
NUP50-216ENST00000486184 F8WEM9 126 aa6.7□□□□□ -1.34
NUP50-216ENST00000486184 LYRM7Q5U5X0 104 aa6.7□□□□□ -1.34
NUP50-216ENST00000486184 Q8NBF4 154 aa6.7□□□□□ -1.34
NUP50-216ENST00000486184 LINC00304Q8N9R0 145 aa6.69□□□□□ -1.34
NUP50-216ENST00000486184 PPDPFLQ8WWR9 84 aa6.69□□□□□ -1.34
NUP50-216ENST00000486184 LINC01547P58512 204 aaPredicted RBP6.68□□□□□ -1.34
NUP50-216ENST00000486184 SSBP3-AS1Q7Z2R9 100 aa6.68□□□□□ -1.34
NUP50-216ENST00000486184 NAA38Q9BRA0 125 aaKnown RBP6.68□□□□□ -1.34
NUP50-216ENST00000486184 SNHG12Q9BXW3 62 aa6.68□□□□□ -1.34
NUP50-216ENST00000486184 Q8N377 158 aa6.67□□□□□ -1.34
NUP50-216ENST00000486184 H3BUT2 72 aa6.66□□□□□ -1.34
NUP50-216ENST00000486184 ORMDL1Q9P0S3 153 aa6.66□□□□□ -1.34
NUP50-216ENST00000486184 H3BQ85 93 aa6.65□□□□□ -1.34
NUP50-216ENST00000486184 LST1O00453 97 aa6.65□□□□□ -1.34
NUP50-216ENST00000486184 TRACP01848 142 aa6.65□□□□□ -1.34
NUP50-216ENST00000486184 FABP2P12104 132 aa6.65□□□□□ -1.34
NUP50-216ENST00000486184 ATXN8Q156A1 80 aa6.65□□□□□ -1.34
NUP50-216ENST00000486184 SPAG11AQ6PDA7 123 aa6.65□□□□□ -1.34
NUP50-216ENST00000486184 C9orf118A6NHY6 69 aa6.64□□□□□ -1.35
NUP50-216ENST00000486184 COL5A1-AS1Q5SY13 56 aa6.64□□□□□ -1.35
NUP50-216ENST00000486184 SMIM29Q86T20 159 aa6.64□□□□□ -1.35
NUP50-216ENST00000486184 TAX1BP3O14907 124 aa6.63□□□□□ -1.35
NUP50-216ENST00000486184 TRBV20-1A0A075B6N2 111 aa6.61□□□□□ -1.35
NUP50-216ENST00000486184 TMEM256-PLSCR3K7ERE1 68 aa6.61□□□□□ -1.35
NUP50-216ENST00000486184 TCL1BO95988 128 aa6.61□□□□□ -1.35
NUP50-216ENST00000486184 SPINK1P00995 79 aa6.61□□□□□ -1.35
NUP50-216ENST00000486184 NDUFV3P56181 108 aaKnown RBP6.61□□□□□ -1.35
NUP50-216ENST00000486184 A0A1W2PPM0 123 aa6.6□□□□□ -1.35
NUP50-216ENST00000486184 Q6JHZ5 121 aa6.6□□□□□ -1.35
NUP50-216ENST00000486184 TNXBP22105 4242 aa6.59□□□□□ -1.35
NUP50-216ENST00000486184 UBR4Q5T4S7 5183 aa6.59□□□□□ -1.35
NUP50-216ENST00000486184 HRCT1Q6UXD1 115 aa6.59□□□□□ -1.35
NUP50-216ENST00000486184 IGLV8-61A0A075B6I0 122 aa6.57□□□□□ -1.36
NUP50-216ENST00000486184 H3BMG7 143 aa6.57□□□□□ -1.36
NUP50-216ENST00000486184 BAALC-AS2P0C853 105 aa6.57□□□□□ -1.36
NUP50-216ENST00000486184 CD164Q04900 197 aa6.57□□□□□ -1.36
NUP50-216ENST00000486184 LIMD2Q9BT23 127 aa6.57□□□□□ -1.36
NUP50-216ENST00000486184 RPS29P62273 56 aaKnown RBP6.56□□□□□ -1.36
NUP50-216ENST00000486184 UBE2V1Q13404 147 aa6.56□□□□□ -1.36
NUP50-216ENST00000486184 KRTAP9-2Q9BYQ4 174 aa6.56□□□□□ -1.36
NUP50-216ENST00000486184 A0A0G2JQZ4 141 aa6.55□□□□□ -1.36
NUP50-216ENST00000486184 A0A1B0GV72 72 aa6.55□□□□□ -1.36
NUP50-216ENST00000486184 C9JAW5 83 aa6.55□□□□□ -1.36
NUP50-216ENST00000486184 KRTAP19-4Q3LI73 84 aa6.55□□□□□ -1.36
NUP50-216ENST00000486184 IGFL1Q6UW32 110 aa6.55□□□□□ -1.36
NUP50-216ENST00000486184 ANKRD29Q8N6D5 301 aa6.55□□□□□ -1.36
NUP50-216ENST00000486184 KRTAP4-12Q9BQ66 201 aa6.55□□□□□ -1.36
NUP50-216ENST00000486184 SPCS1Q9Y6A9 102 aa6.55□□□□□ -1.36
NUP50-216ENST00000486184 PRR4Q16378 134 aa6.54□□□□□ -1.36
NUP50-216ENST00000486184 KRTAP19-1Q8IUB9 90 aa6.53□□□□□ -1.36
NUP50-216ENST00000486184 RETNLBQ9BQ08 111 aa6.53□□□□□ -1.36
NUP50-216ENST00000486184 CDIP1Q9H305 208 aa6.53□□□□□ -1.36
NUP50-216ENST00000486184 KRTAP9-1A8MXZ3 250 aaPredicted RBP6.52□□□□□ -1.37
NUP50-216ENST00000486184 KRTAP9-6A0A140TA67 174 aa6.51□□□□□ -1.37
NUP50-216ENST00000486184 RBM3P98179 157 aaKnown RBP6.51□□□□□ -1.37
NUP50-216ENST00000486184 HERC1Q15751 4861 aa6.5□□□□□ -1.37
NUP50-216ENST00000486184 DSCR8Q96T75 97 aa6.5□□□□□ -1.37
NUP50-216ENST00000486184 TRBV7-7A0A0K0K1E9 115 aa6.49□□□□□ -1.37
NUP50-216ENST00000486184 JMJD7-PLA2G4BH0Y9G9 81 aa6.49□□□□□ -1.37
NUP50-216ENST00000486184 H3BT86 120 aa6.49□□□□□ -1.37
NUP50-216ENST00000486184 GTF2H5Q6ZYL4 71 aa6.49□□□□□ -1.37
NUP50-216ENST00000486184 TEN1Q86WV5 123 aa6.49□□□□□ -1.37
NUP50-216ENST00000486184 K7EP34 96 aa6.48□□□□□ -1.37
NUP50-216ENST00000486184 MTURNQ8N3F0 131 aa6.48□□□□□ -1.37
NUP50-216ENST00000486184 Q5XG85 94 aa6.47□□□□□ -1.37
NUP50-216ENST00000486184 Q6Q795 121 aa6.47□□□□□ -1.37
NUP50-216ENST00000486184 FP248Q71RG6 208 aaPredicted RBP6.47□□□□□ -1.37
NUP50-216ENST00000486184 VPS25Q9BRG1 176 aa6.47□□□□□ -1.37
NUP50-216ENST00000486184 SS18L2Q9UHA2 77 aa6.47□□□□□ -1.37
NUP50-216ENST00000486184 CCKP06307 115 aa6.46□□□□□ -1.38
NUP50-216ENST00000486184 IGLV7-46A0A075B6I9 117 aa6.45□□□□□ -1.38
NUP50-216ENST00000486184 A0A087WSZ3 146 aa6.44□□□□□ -1.38
NUP50-216ENST00000486184 TRBV7-4A0A0J9YYF1 115 aa6.44□□□□□ -1.38
NUP50-216ENST00000486184 LCE3BQ5TA77 95 aa6.44□□□□□ -1.38
NUP50-216ENST00000486184 A0A1W2PNM2 257 aa6.43□□□□□ -1.38
NUP50-216ENST00000486184 PDE6GP18545 87 aa6.43□□□□□ -1.38
NUP50-216ENST00000486184 C14orf132Q9NPU4 83 aa6.43□□□□□ -1.38
NUP50-216ENST00000486184 C21orf62-AS1Q17RA5 79 aa6.42□□□□□ -1.38
NUP50-216ENST00000486184 LOC110117498A0A087WWA1 95 aa6.41□□□□□ -1.38
NUP50-216ENST00000486184 ASB16-AS1Q495Z4 193 aa6.41□□□□□ -1.38
NUP50-216ENST00000486184 C1orf195Q5TG92 126 aa6.4□□□□□ -1.38
NUP50-216ENST00000486184 OBSCN-AS1Q96MR7 158 aa6.4□□□□□ -1.38
NUP50-216ENST00000486184 Q6ZQT0 140 aa6.39□□□□□ -1.39
NUP50-216ENST00000486184 F8W1H4 67 aa6.38□□□□□ -1.39
NUP50-216ENST00000486184 TPRXLQ17RH7 258 aa6.38□□□□□ -1.39
NUP50-216ENST00000486184 PRO0461Q9UI25 63 aa6.38□□□□□ -1.39
NUP50-216ENST00000486184 HMCN2Q8NDA2 5059 aa6.38□□□□□ -1.39
NUP50-216ENST00000486184 A0A1B0GW54 56 aa6.36□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 70.4 ms