RNA–Protein interactions for RNA: ENST00000486044.1

PDE6D-205, Transcript of phosphodiesterase 6D, humanhuman

TSL 2

Gene PDE6D, Length 1,005 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDE6D-205ENST00000486044 PET117Q6UWS5 81 aa8.28□□□□□ -1.08
PDE6D-205ENST00000486044 SMCPP49901 116 aaPredicted RBP8.27□□□□□ -1.09
PDE6D-205ENST00000486044 SMIM11BQ8TCY0 68 aa8.27□□□□□ -1.09
PDE6D-205ENST00000486044 Q96NJ1 140 aa8.27□□□□□ -1.09
PDE6D-205ENST00000486044 SLC7A5P1Q8MH63 180 aa8.26□□□□□ -1.09
PDE6D-205ENST00000486044 IGFL1Q6UW32 110 aa8.25□□□□□ -1.09
PDE6D-205ENST00000486044 FCGBPQ9Y6R7 5405 aaPredicted RBP8.25□□□□□ -1.09
PDE6D-205ENST00000486044 OCIAD2Q56VL3 154 aa8.24□□□□□ -1.09
PDE6D-205ENST00000486044 MUSTN1Q8IVN3 82 aa8.24□□□□□ -1.09
PDE6D-205ENST00000486044 LST1O00453 97 aa8.23□□□□□ -1.09
PDE6D-205ENST00000486044 LINC00575Q6W349 94 aa8.22□□□□□ -1.09
PDE6D-205ENST00000486044 Q6ZQY7 126 aa8.22□□□□□ -1.09
PDE6D-205ENST00000486044 hADV29S1A0JD25 119 aa8.21□□□□□ -1.1
PDE6D-205ENST00000486044 C20orf166-AS1Q96NR2 134 aa8.21□□□□□ -1.1
PDE6D-205ENST00000486044 COLCA2A8K830 154 aa8.2□□□□□ -1.1
PDE6D-205ENST00000486044 KRTAP19-1Q8IUB9 90 aa8.2□□□□□ -1.1
PDE6D-205ENST00000486044 MT2AP02795 61 aa8.18□□□□□ -1.1
PDE6D-205ENST00000486044 A8MUU9 505 aa8.17□□□□□ -1.1
PDE6D-205ENST00000486044 C3orf79P0CE67 100 aa8.17□□□□□ -1.1
PDE6D-205ENST00000486044 SS18L2Q9UHA2 77 aa8.17□□□□□ -1.1
PDE6D-205ENST00000486044 SCGB1D1O95968 90 aa8.16□□□□□ -1.1
PDE6D-205ENST00000486044 PPDPFLQ8WWR9 84 aa8.16□□□□□ -1.1
PDE6D-205ENST00000486044 SNHG12Q9BXW3 62 aa8.16□□□□□ -1.1
PDE6D-205ENST00000486044 FAM236DA0A1B0GTK5 79 aa8.15□□□□□ -1.1
PDE6D-205ENST00000486044 HIST1H2BKO60814 126 aa8.15□□□□□ -1.1
PDE6D-205ENST00000486044 HIST1H2BJP06899 126 aa8.15□□□□□ -1.1
PDE6D-205ENST00000486044 FAM236CP0DP71 79 aa8.15□□□□□ -1.1
PDE6D-205ENST00000486044 HIST1H2BOP23527 126 aa8.15□□□□□ -1.1
PDE6D-205ENST00000486044 HIST1H2BBP33778 126 aa8.15□□□□□ -1.1
PDE6D-205ENST00000486044 HIST1H2BDP58876 126 aa8.15□□□□□ -1.1
PDE6D-205ENST00000486044 KRTDAPP60985 99 aa8.15□□□□□ -1.1
PDE6D-205ENST00000486044 HIST1H2BCP62807 126 aa8.15□□□□□ -1.1
PDE6D-205ENST00000486044 HIST2H2BEQ16778 126 aa8.15□□□□□ -1.1
PDE6D-205ENST00000486044 HIST2H2BFQ5QNW6 126 aaPredicted RBP8.15□□□□□ -1.1
PDE6D-205ENST00000486044 HIST1H2BHQ93079 126 aa8.15□□□□□ -1.1
PDE6D-205ENST00000486044 HIST1H2BNQ99877 126 aa8.15□□□□□ -1.1
PDE6D-205ENST00000486044 HIST1H2BMQ99879 126 aa8.15□□□□□ -1.1
PDE6D-205ENST00000486044 ANKRD39Q53RE8 183 aa8.14□□□□□ -1.11
PDE6D-205ENST00000486044 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP8.14□□□□□ -1.11
PDE6D-205ENST00000486044 KRTAP10-10P60014 251 aa8.12□□□□□ -1.11
PDE6D-205ENST00000486044 LINC00846Q9NV44 126 aa8.12□□□□□ -1.11
PDE6D-205ENST00000486044 MT1FP04733 61 aa8.11□□□□□ -1.11
PDE6D-205ENST00000486044 H3BUT2 72 aa8.1□□□□□ -1.11
PDE6D-205ENST00000486044 KRTAP9-3Q9BYQ3 159 aa8.1□□□□□ -1.11
PDE6D-205ENST00000486044 RBM12B-AS1Q9P1G2 102 aa8.09□□□□□ -1.11
PDE6D-205ENST00000486044 ATOH7Q8N100 152 aa8.08□□□□□ -1.12
PDE6D-205ENST00000486044 MACF1Q9UPN3 7388 aaKnown RBP8.08□□□□□ -1.12
PDE6D-205ENST00000486044 BVES-AS1Q5T3Y7 98 aa8.07□□□□□ -1.12
PDE6D-205ENST00000486044 TEN1Q86WV5 123 aa8.07□□□□□ -1.12
PDE6D-205ENST00000486044 SYNE2Q8WXH0 6885 aaKnown RBP8.05□□□□□ -1.12
PDE6D-205ENST00000486044 SNRPEP62304 92 aaKnown RBP8.05□□□□□ -1.12
PDE6D-205ENST00000486044 DSCR10P59022 87 aa8.04□□□□□ -1.12
PDE6D-205ENST00000486044 C12orf57Q99622 126 aa8.04□□□□□ -1.12
PDE6D-205ENST00000486044 A0A087WSZ3 146 aa8.02□□□□□ -1.13
PDE6D-205ENST00000486044 SNCGO76070 127 aa8.02□□□□□ -1.13
PDE6D-205ENST00000486044 COA6Q5JTJ3 125 aaKnown RBP8.02□□□□□ -1.13
PDE6D-205ENST00000486044 KRTAP16-1A8MUX0 517 aa8□□□□□ -1.13
PDE6D-205ENST00000486044 LINC00313P59037 77 aa8□□□□□ -1.13
PDE6D-205ENST00000486044 MPLKIPQ8TAP9 179 aa8□□□□□ -1.13
PDE6D-205ENST00000486044 SIGMAR1Q99720 223 aa7.99□□□□□ -1.13
PDE6D-205ENST00000486044 NDUFV3P56181 108 aaKnown RBP7.98□□□□□ -1.13
PDE6D-205ENST00000486044 HRES1P13985 223 aa7.97□□□□□ -1.13
PDE6D-205ENST00000486044 MTURNQ8N3F0 131 aa7.97□□□□□ -1.13
PDE6D-205ENST00000486044 KRTAP19-6Q3LI70 58 aa7.95□□□□□ -1.14
PDE6D-205ENST00000486044 HSBP1L1C9JCN9 74 aa7.94□□□□□ -1.14
PDE6D-205ENST00000486044 H3BMG7 143 aa7.93□□□□□ -1.14
PDE6D-205ENST00000486044 GHRHP01286 108 aa7.93□□□□□ -1.14
PDE6D-205ENST00000486044 NOTCH2NLQ7Z3S9 236 aa7.93□□□□□ -1.14
PDE6D-205ENST00000486044 IGKV4-1P06312 121 aa7.92□□□□□ -1.14
PDE6D-205ENST00000486044 H0YGX0 51 aa7.91□□□□□ -1.14
PDE6D-205ENST00000486044 HIST1H4GQ99525 98 aa7.91□□□□□ -1.14
PDE6D-205ENST00000486044 FABP2P12104 132 aa7.87□□□□□ -1.15
PDE6D-205ENST00000486044 A0A1W2PNM2 257 aa7.86□□□□□ -1.15
PDE6D-205ENST00000486044 KRTAP6-3Q3LI67 103 aa7.85□□□□□ -1.15
PDE6D-205ENST00000486044 RAB37Q96AX2 223 aa7.85□□□□□ -1.15
PDE6D-205ENST00000486044 KRTAP4-8Q9BYQ9 185 aa7.85□□□□□ -1.15
PDE6D-205ENST00000486044 FAM218AQ96MZ4 157 aa7.84□□□□□ -1.15
PDE6D-205ENST00000486044 TRBV7-4A0A0J9YYF1 115 aa7.83□□□□□ -1.16
PDE6D-205ENST00000486044 A8MWP4 228 aa7.83□□□□□ -1.16
PDE6D-205ENST00000486044 IGHV6-1A0A0B4J1U7 121 aa7.82□□□□□ -1.16
PDE6D-205ENST00000486044 A0A1B0GX51 115 aa7.82□□□□□ -1.16
PDE6D-205ENST00000486044 ANKRD29Q8N6D5 301 aa7.82□□□□□ -1.16
PDE6D-205ENST00000486044 DEFB116Q30KQ4 102 aa7.8□□□□□ -1.16
PDE6D-205ENST00000486044 S100A2P29034 98 aa7.79□□□□□ -1.16
PDE6D-205ENST00000486044 SPINK7P58062 85 aa7.79□□□□□ -1.16
PDE6D-205ENST00000486044 LINC00472Q9H8W2 130 aa7.79□□□□□ -1.16
PDE6D-205ENST00000486044 A0A0B4J2C4 111 aa7.78□□□□□ -1.16
PDE6D-205ENST00000486044 C8orf87E5RJ46 101 aa7.77□□□□□ -1.17
PDE6D-205ENST00000486044 ZCCHC13Q8WW36 166 aaKnown RBP7.76□□□□□ -1.17
PDE6D-205ENST00000486044 HIST1H2BLQ99880 126 aa7.76□□□□□ -1.17
PDE6D-205ENST00000486044 COX8AP10176 69 aa7.75□□□□□ -1.17
PDE6D-205ENST00000486044 H3BQ85 93 aa7.74□□□□□ -1.17
PDE6D-205ENST00000486044 TRACP01848 142 aa7.74□□□□□ -1.17
PDE6D-205ENST00000486044 HIST3H2BBQ8N257 126 aa7.74□□□□□ -1.17
PDE6D-205ENST00000486044 Q8N9P0 234 aaPredicted RBP7.74□□□□□ -1.17
PDE6D-205ENST00000486044 A0A1B0GVX0 72 aa7.73□□□□□ -1.17
PDE6D-205ENST00000486044 DLEU1O43261 78 aa7.73□□□□□ -1.17
PDE6D-205ENST00000486044 CCKP06307 115 aa7.72□□□□□ -1.17
PDE6D-205ENST00000486044 A0A1B0GV72 72 aa7.71□□□□□ -1.18
PDE6D-205ENST00000486044 DNAL4O96015 105 aa7.71□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 61.4 ms