RNA–Protein interactions for RNA: ENST00000485985.1

LMBR1-217, Transcript of limb development membrane protein 1, humanhuman

TSL 2

Gene LMBR1, Length 644 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMBR1-217ENST00000485985 Q6ZQY7 126 aa11.19□□□□□ -0.62
LMBR1-217ENST00000485985 VAMP3Q15836 100 aa11.17□□□□□ -0.62
LMBR1-217ENST00000485985 F8WEM9 126 aa11.16□□□□□ -0.62
LMBR1-217ENST00000485985 hADV29S1A0JD25 119 aa11.15□□□□□ -0.62
LMBR1-217ENST00000485985 LORP23490 312 aaPredicted RBP11.15□□□□□ -0.62
LMBR1-217ENST00000485985 RPL37P61927 97 aaKnown RBP11.15□□□□□ -0.62
LMBR1-217ENST00000485985 C12orf57Q99622 126 aa11.15□□□□□ -0.62
LMBR1-217ENST00000485985 TCL1BO95988 128 aa11.14□□□□□ -0.63
LMBR1-217ENST00000485985 KRTAP10-6P60371 365 aaPredicted RBP11.13□□□□□ -0.63
LMBR1-217ENST00000485985 IGFL1Q6UW32 110 aa11.11□□□□□ -0.63
LMBR1-217ENST00000485985 CLEC2BQ92478 149 aa11.11□□□□□ -0.63
LMBR1-217ENST00000485985 S100A6P06703 90 aa11.1□□□□□ -0.63
LMBR1-217ENST00000485985 Q6JHZ5 121 aa11.09□□□□□ -0.63
LMBR1-217ENST00000485985 TRBV7-7A0A0K0K1E9 115 aa11.08□□□□□ -0.64
LMBR1-217ENST00000485985 HIST1H4GQ99525 98 aa11.08□□□□□ -0.64
LMBR1-217ENST00000485985 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP11.07□□□□□ -0.64
LMBR1-217ENST00000485985 SCGB1D1O95968 90 aa11.06□□□□□ -0.64
LMBR1-217ENST00000485985 COX8AP10176 69 aa11.06□□□□□ -0.64
LMBR1-217ENST00000485985 OCIAD2Q56VL3 154 aa11.06□□□□□ -0.64
LMBR1-217ENST00000485985 BVES-AS1Q5T3Y7 98 aa11.05□□□□□ -0.64
LMBR1-217ENST00000485985 M0R2T5 61 aa11.04□□□□□ -0.64
LMBR1-217ENST00000485985 FLGP20930 4061 aaPredicted RBP11.03□□□□□ -0.64
LMBR1-217ENST00000485985 PPDPFLQ8WWR9 84 aa11.02□□□□□ -0.65
LMBR1-217ENST00000485985 H3BUT2 72 aa11.01□□□□□ -0.65
LMBR1-217ENST00000485985 DLEU1O43261 78 aa11□□□□□ -0.65
LMBR1-217ENST00000485985 CFC1P0CG37 223 aa10.99□□□□□ -0.65
LMBR1-217ENST00000485985 SNHG12Q9BXW3 62 aa10.98□□□□□ -0.65
LMBR1-217ENST00000485985 COX6B2Q6YFQ2 88 aa10.97□□□□□ -0.65
LMBR1-217ENST00000485985 C14orf144Q96I85 54 aa10.97□□□□□ -0.65
LMBR1-217ENST00000485985 OBSCN-AS1Q96MR7 158 aa10.96□□□□□ -0.65
LMBR1-217ENST00000485985 FAM218AQ96MZ4 157 aa10.96□□□□□ -0.65
LMBR1-217ENST00000485985 PAM16Q9Y3D7 125 aa10.94□□□□□ -0.66
LMBR1-217ENST00000485985 C2orf91Q6ZV80 131 aa10.93□□□□□ -0.66
LMBR1-217ENST00000485985 RAB37Q96AX2 223 aa10.93□□□□□ -0.66
LMBR1-217ENST00000485985 HIGD1BQ9P298 99 aa10.93□□□□□ -0.66
LMBR1-217ENST00000485985 A0A0B4J2C4 111 aa10.92□□□□□ -0.66
LMBR1-217ENST00000485985 LST1O00453 97 aa10.91□□□□□ -0.66
LMBR1-217ENST00000485985 SPATA45Q537H7 98 aa10.91□□□□□ -0.66
LMBR1-217ENST00000485985 Q75L30 129 aa10.91□□□□□ -0.66
LMBR1-217ENST00000485985 Q6Q795 121 aa10.9□□□□□ -0.66
LMBR1-217ENST00000485985 NDUFV3P56181 108 aaKnown RBP10.88□□□□□ -0.67
LMBR1-217ENST00000485985 H0YGX0 51 aa10.87□□□□□ -0.67
LMBR1-217ENST00000485985 VAMP8Q9BV40 100 aa10.86□□□□□ -0.67
LMBR1-217ENST00000485985 ATP11AUNQ6ZP68 121 aa10.85□□□□□ -0.67
LMBR1-217ENST00000485985 SS18L2Q9UHA2 77 aa10.85□□□□□ -0.67
LMBR1-217ENST00000485985 TEN1Q86WV5 123 aa10.84□□□□□ -0.67
LMBR1-217ENST00000485985 CEND1Q8N111 149 aa10.84□□□□□ -0.67
LMBR1-217ENST00000485985 Q96NJ1 140 aa10.83□□□□□ -0.68
LMBR1-217ENST00000485985 A0A087WSZ3 146 aa10.82□□□□□ -0.68
LMBR1-217ENST00000485985 SNCGO76070 127 aa10.82□□□□□ -0.68
LMBR1-217ENST00000485985 FXYD2P54710 66 aa10.81□□□□□ -0.68
LMBR1-217ENST00000485985 PRO1854Q9UHT4 67 aa10.81□□□□□ -0.68
LMBR1-217ENST00000485985 TMA7Q9Y2S6 64 aaKnown RBP10.8□□□□□ -0.68
LMBR1-217ENST00000485985 H3BMG7 143 aa10.79□□□□□ -0.68
LMBR1-217ENST00000485985 C20orf166-AS1Q96NR2 134 aa10.79□□□□□ -0.68
LMBR1-217ENST00000485985 A0A1B0GX51 115 aa10.78□□□□□ -0.68
LMBR1-217ENST00000485985 TRIAP1O43715 76 aa10.78□□□□□ -0.68
LMBR1-217ENST00000485985 TMEM238LA0A1B0GVL6 79 aa10.77□□□□□ -0.69
LMBR1-217ENST00000485985 A6NJY4 79 aa10.77□□□□□ -0.69
LMBR1-217ENST00000485985 FABP2P12104 132 aa10.77□□□□□ -0.69
LMBR1-217ENST00000485985 A8MUU9 505 aa10.76□□□□□ -0.69
LMBR1-217ENST00000485985 A0A1W2PNM2 257 aa10.75□□□□□ -0.69
LMBR1-217ENST00000485985 DSCR10P59022 87 aa10.71□□□□□ -0.69
LMBR1-217ENST00000485985 KRTAP9-7A8MTY7 169 aa10.7□□□□□ -0.7
LMBR1-217ENST00000485985 KRTAP9-1A8MXZ3 250 aaPredicted RBP10.7□□□□□ -0.7
LMBR1-217ENST00000485985 GHRHP01286 108 aa10.7□□□□□ -0.7
LMBR1-217ENST00000485985 K7ERJ3 54 aa10.69□□□□□ -0.7
LMBR1-217ENST00000485985 SIGMAR1Q99720 223 aa10.69□□□□□ -0.7
LMBR1-217ENST00000485985 A0A1B0GV72 72 aa10.68□□□□□ -0.7
LMBR1-217ENST00000485985 HSD52Q0P140 79 aa10.66□□□□□ -0.7
LMBR1-217ENST00000485985 PYY3Q5JQD4 70 aa10.66□□□□□ -0.7
LMBR1-217ENST00000485985 ORMDL1Q9P0S3 153 aa10.65□□□□□ -0.7
LMBR1-217ENST00000485985 DNAL4O96015 105 aa10.64□□□□□ -0.71
LMBR1-217ENST00000485985 TRBV7-4A0A0J9YYF1 115 aa10.63□□□□□ -0.71
LMBR1-217ENST00000485985 ANKRD29Q8N6D5 301 aa10.63□□□□□ -0.71
LMBR1-217ENST00000485985 KRTAP16-1A8MUX0 517 aa10.62□□□□□ -0.71
LMBR1-217ENST00000485985 PSMB2P49721 201 aa10.62□□□□□ -0.71
LMBR1-217ENST00000485985 KRTAP9-8Q9BYQ0 159 aa10.62□□□□□ -0.71
LMBR1-217ENST00000485985 IGKV4-1P06312 121 aa10.61□□□□□ -0.71
LMBR1-217ENST00000485985 LINC00313P59037 77 aa10.58□□□□□ -0.72
LMBR1-217ENST00000485985 NOTCH2NLQ7Z3S9 236 aa10.58□□□□□ -0.72
LMBR1-217ENST00000485985 USH2AO75445 5202 aa10.58□□□□□ -0.72
LMBR1-217ENST00000485985 H3BQ85 93 aa10.57□□□□□ -0.72
LMBR1-217ENST00000485985 TMEM256-PLSCR3K7ERE1 68 aa10.57□□□□□ -0.72
LMBR1-217ENST00000485985 DEFB116Q30KQ4 102 aa10.57□□□□□ -0.72
LMBR1-217ENST00000485985 KRTAP3-3Q9BYR6 98 aa10.57□□□□□ -0.72
LMBR1-217ENST00000485985 KRTAP3-2Q9BYR7 98 aa10.57□□□□□ -0.72
LMBR1-217ENST00000485985 SSPOA2VEC9 5147 aa10.57□□□□□ -0.72
LMBR1-217ENST00000485985 CCKP06307 115 aa10.56□□□□□ -0.72
LMBR1-217ENST00000485985 LINC00472Q9H8W2 130 aa10.56□□□□□ -0.72
LMBR1-217ENST00000485985 TRBV20-1A0A075B6N2 111 aa10.55□□□□□ -0.72
LMBR1-217ENST00000485985 COX6CP09669 75 aa10.55□□□□□ -0.72
LMBR1-217ENST00000485985 TRACP01848 142 aa10.53□□□□□ -0.72
LMBR1-217ENST00000485985 UBE2V1Q13404 147 aa10.51□□□□□ -0.73
LMBR1-217ENST00000485985 UQCR10Q9UDW1 63 aa10.5□□□□□ -0.73
LMBR1-217ENST00000485985 IGHV6-1A0A0B4J1U7 121 aa10.49□□□□□ -0.73
LMBR1-217ENST00000485985 HRES1P13985 223 aa10.46□□□□□ -0.73
LMBR1-217ENST00000485985 MPLKIPQ8TAP9 179 aa10.46□□□□□ -0.73
LMBR1-217ENST00000485985 VPS25Q9BRG1 176 aa10.45□□□□□ -0.74
LMBR1-217ENST00000485985 FAM236DA0A1B0GTK5 79 aa10.43□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 113 ms