RNA–Protein interactions for RNA: ENST00000485550.5

HMGN1-215, Transcript of high mobility group nucleosome binding domain 1, humanhuman

TSL 5

Gene HMGN1, Length 745 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1-215ENST00000485550 SCGB1D4Q6XE38 83 aa5.77□□□□□ -1.49
HMGN1-215ENST00000485550 A0A0G2JQZ4 141 aa5.76□□□□□ -1.49
HMGN1-215ENST00000485550 PCOTHQ58A44 107 aa5.76□□□□□ -1.49
HMGN1-215ENST00000485550 IGLV8-61A0A075B6I0 122 aa5.75□□□□□ -1.49
HMGN1-215ENST00000485550 TEX49A0A1B0GTD5 131 aa5.75□□□□□ -1.49
HMGN1-215ENST00000485550 A6NDN8 102 aa5.75□□□□□ -1.49
HMGN1-215ENST00000485550 ATOH7Q8N100 152 aa5.75□□□□□ -1.49
HMGN1-215ENST00000485550 PRO1933Q9H354 126 aa5.75□□□□□ -1.49
HMGN1-215ENST00000485550 SMIM29Q86T20 159 aa5.74□□□□□ -1.49
HMGN1-215ENST00000485550 MUSTN1Q8IVN3 82 aa5.74□□□□□ -1.49
HMGN1-215ENST00000485550 AKR1D1P51857 326 aa5.73□□□□□ -1.49
HMGN1-215ENST00000485550 A0A1B0GWB2 263 aa5.72□□□□□ -1.49
HMGN1-215ENST00000485550 CD164Q04900 197 aa5.72□□□□□ -1.49
HMGN1-215ENST00000485550 PCP2Q8IVA1 136 aa5.72□□□□□ -1.49
HMGN1-215ENST00000485550 TRBV7-6A0A0J9YX20 115 aa5.71□□□□□ -1.5
HMGN1-215ENST00000485550 C20orf202A1L168 122 aa5.71□□□□□ -1.5
HMGN1-215ENST00000485550 M0R2T5 61 aa5.71□□□□□ -1.5
HMGN1-215ENST00000485550 IFITM1P13164 125 aa5.71□□□□□ -1.5
HMGN1-215ENST00000485550 COA6Q5JTJ3 125 aaKnown RBP5.71□□□□□ -1.5
HMGN1-215ENST00000485550 C1orf195Q5TG92 126 aa5.7□□□□□ -1.5
HMGN1-215ENST00000485550 COPS9Q8WXC6 57 aa5.7□□□□□ -1.5
HMGN1-215ENST00000485550 IGLV5-48A0A075B6I7 105 aa5.69□□□□□ -1.5
HMGN1-215ENST00000485550 SMIM11BQ8TCY0 68 aa5.69□□□□□ -1.5
HMGN1-215ENST00000485550 Q6ZVH6 145 aa5.68□□□□□ -1.5
HMGN1-215ENST00000485550 TRAV13-2A0A0B4J235 113 aa5.67□□□□□ -1.5
HMGN1-215ENST00000485550 Q5XG85 94 aa5.67□□□□□ -1.5
HMGN1-215ENST00000485550 A4D1N5 150 aa5.66□□□□□ -1.5
HMGN1-215ENST00000485550 NHP2Q9NX24 153 aaKnown RBP5.66□□□□□ -1.5
HMGN1-215ENST00000485550 FLGP20930 4061 aaPredicted RBP5.64□□□□□ -1.51
HMGN1-215ENST00000485550 F8WEM9 126 aa5.63□□□□□ -1.51
HMGN1-215ENST00000485550 TCL1BO95988 128 aa5.63□□□□□ -1.51
HMGN1-215ENST00000485550 RPL37P61927 97 aaKnown RBP5.63□□□□□ -1.51
HMGN1-215ENST00000485550 VAMP3Q15836 100 aa5.63□□□□□ -1.51
HMGN1-215ENST00000485550 LINC00575Q6W349 94 aa5.62□□□□□ -1.51
HMGN1-215ENST00000485550 Q6ZQY7 126 aa5.62□□□□□ -1.51
HMGN1-215ENST00000485550 hADV29S1A0JD25 119 aa5.61□□□□□ -1.51
HMGN1-215ENST00000485550 KRTAP23-1A1A580 65 aa5.61□□□□□ -1.51
HMGN1-215ENST00000485550 SNRPEP62304 92 aaKnown RBP5.61□□□□□ -1.51
HMGN1-215ENST00000485550 C21orf62-AS1Q17RA5 79 aa5.61□□□□□ -1.51
HMGN1-215ENST00000485550 COX6B2Q6YFQ2 88 aa5.61□□□□□ -1.51
HMGN1-215ENST00000485550 HSBP1L1C9JCN9 74 aa5.6□□□□□ -1.51
HMGN1-215ENST00000485550 C12orf57Q99622 126 aa5.6□□□□□ -1.51
HMGN1-215ENST00000485550 S100A2P29034 98 aa5.59□□□□□ -1.51
HMGN1-215ENST00000485550 HIST3H2BBQ8N257 126 aa5.59□□□□□ -1.51
HMGN1-215ENST00000485550 HIST1H2BLQ99880 126 aa5.59□□□□□ -1.51
HMGN1-215ENST00000485550 OCIAD2Q56VL3 154 aa5.58□□□□□ -1.52
HMGN1-215ENST00000485550 IGFL1Q6UW32 110 aa5.58□□□□□ -1.52
HMGN1-215ENST00000485550 SSPOA2VEC9 5147 aa5.58□□□□□ -1.52
HMGN1-215ENST00000485550 TRBV7-7A0A0K0K1E9 115 aa5.57□□□□□ -1.52
HMGN1-215ENST00000485550 Q6JHZ5 121 aa5.57□□□□□ -1.52
HMGN1-215ENST00000485550 CLEC2BQ92478 149 aa5.57□□□□□ -1.52
HMGN1-215ENST00000485550 OBSCN-AS1Q96MR7 158 aa5.56□□□□□ -1.52
HMGN1-215ENST00000485550 H3BUT2 72 aa5.55□□□□□ -1.52
HMGN1-215ENST00000485550 HIST1H4GQ99525 98 aa5.55□□□□□ -1.52
HMGN1-215ENST00000485550 SNHG12Q9BXW3 62 aa5.55□□□□□ -1.52
HMGN1-215ENST00000485550 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP5.54□□□□□ -1.52
HMGN1-215ENST00000485550 SCGB1D1O95968 90 aa5.53□□□□□ -1.52
HMGN1-215ENST00000485550 BVES-AS1Q5T3Y7 98 aa5.53□□□□□ -1.52
HMGN1-215ENST00000485550 Q6Q795 121 aa5.53□□□□□ -1.52
HMGN1-215ENST00000485550 USH2AO75445 5202 aa5.52□□□□□ -1.53
HMGN1-215ENST00000485550 LST1O00453 97 aa5.52□□□□□ -1.53
HMGN1-215ENST00000485550 S100A6P06703 90 aa5.52□□□□□ -1.53
HMGN1-215ENST00000485550 ATP11AUNQ6ZP68 121 aa5.52□□□□□ -1.53
HMGN1-215ENST00000485550 COX8AP10176 69 aa5.5□□□□□ -1.53
HMGN1-215ENST00000485550 Q96NJ1 140 aa5.5□□□□□ -1.53
HMGN1-215ENST00000485550 CFC1P0CG37 223 aa5.49□□□□□ -1.53
HMGN1-215ENST00000485550 Q75L30 129 aa5.49□□□□□ -1.53
HMGN1-215ENST00000485550 PPDPFLQ8WWR9 84 aa5.49□□□□□ -1.53
HMGN1-215ENST00000485550 FCGBPQ9Y6R7 5405 aaPredicted RBP5.48□□□□□ -1.53
HMGN1-215ENST00000485550 RAB37Q96AX2 223 aa5.48□□□□□ -1.53
HMGN1-215ENST00000485550 C14orf144Q96I85 54 aa5.48□□□□□ -1.53
HMGN1-215ENST00000485550 FAM218AQ96MZ4 157 aa5.47□□□□□ -1.53
HMGN1-215ENST00000485550 SNCGO76070 127 aa5.46□□□□□ -1.54
HMGN1-215ENST00000485550 NDUFV3P56181 108 aaKnown RBP5.46□□□□□ -1.54
HMGN1-215ENST00000485550 A0A087WSZ3 146 aa5.45□□□□□ -1.54
HMGN1-215ENST00000485550 H0YGX0 51 aa5.45□□□□□ -1.54
HMGN1-215ENST00000485550 DLEU1O43261 78 aa5.45□□□□□ -1.54
HMGN1-215ENST00000485550 SS18L2Q9UHA2 77 aa5.45□□□□□ -1.54
HMGN1-215ENST00000485550 TEN1Q86WV5 123 aa5.44□□□□□ -1.54
HMGN1-215ENST00000485550 PAM16Q9Y3D7 125 aa5.44□□□□□ -1.54
HMGN1-215ENST00000485550 A0A0B4J2C4 111 aa5.43□□□□□ -1.54
HMGN1-215ENST00000485550 H3BMG7 143 aa5.43□□□□□ -1.54
HMGN1-215ENST00000485550 FABP2P12104 132 aa5.43□□□□□ -1.54
HMGN1-215ENST00000485550 S100A1P23297 94 aa5.43□□□□□ -1.54
HMGN1-215ENST00000485550 SPATA45Q537H7 98 aa5.43□□□□□ -1.54
HMGN1-215ENST00000485550 DSCR10P59022 87 aa5.42□□□□□ -1.54
HMGN1-215ENST00000485550 C20orf166-AS1Q96NR2 134 aa5.42□□□□□ -1.54
HMGN1-215ENST00000485550 HIGD1BQ9P298 99 aa5.42□□□□□ -1.54
HMGN1-215ENST00000485550 A8MUU9 505 aa5.41□□□□□ -1.54
HMGN1-215ENST00000485550 C2orf91Q6ZV80 131 aa5.41□□□□□ -1.54
HMGN1-215ENST00000485550 A0A1B0GV72 72 aa5.4□□□□□ -1.54
HMGN1-215ENST00000485550 CEND1Q8N111 149 aa5.4□□□□□ -1.54
HMGN1-215ENST00000485550 TMA7Q9Y2S6 64 aaKnown RBP5.4□□□□□ -1.54
HMGN1-215ENST00000485550 A0A1W2PNM2 257 aa5.39□□□□□ -1.55
HMGN1-215ENST00000485550 SIGMAR1Q99720 223 aa5.39□□□□□ -1.55
HMGN1-215ENST00000485550 VAMP8Q9BV40 100 aa5.39□□□□□ -1.55
HMGN1-215ENST00000485550 PRO1854Q9UHT4 67 aa5.39□□□□□ -1.55
HMGN1-215ENST00000485550 TRBV20-1A0A075B6N2 111 aa5.38□□□□□ -1.55
HMGN1-215ENST00000485550 FXYD2P54710 66 aa5.38□□□□□ -1.55
HMGN1-215ENST00000485550 A0A1B0GX51 115 aa5.37□□□□□ -1.55
Retrieved 100 of 20,778 RNA–protein pairs in 72.9 ms