RNA–Protein interactions for RNA: ENST00000481929.5

HDAC6-224, Transcript of histone deacetylase 6, humanhuman

TSL 4

Gene HDAC6, Length 591 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-224ENST00000481929 HIST1H2BOP23527 126 aa7.35□□□□□ -1.23
HDAC6-224ENST00000481929 HIST1H2BBP33778 126 aa7.35□□□□□ -1.23
HDAC6-224ENST00000481929 HIST1H2BDP58876 126 aa7.35□□□□□ -1.23
HDAC6-224ENST00000481929 HIST1H2BCP62807 126 aa7.35□□□□□ -1.23
HDAC6-224ENST00000481929 HIST2H2BEQ16778 126 aa7.35□□□□□ -1.23
HDAC6-224ENST00000481929 KRTAP20-1Q3LI63 56 aa7.35□□□□□ -1.23
HDAC6-224ENST00000481929 HIST2H2BFQ5QNW6 126 aaPredicted RBP7.35□□□□□ -1.23
HDAC6-224ENST00000481929 Q6JHZ5 121 aa7.35□□□□□ -1.23
HDAC6-224ENST00000481929 CLEC2BQ92478 149 aa7.35□□□□□ -1.23
HDAC6-224ENST00000481929 HIST1H2BHQ93079 126 aa7.35□□□□□ -1.23
HDAC6-224ENST00000481929 HIST1H2BNQ99877 126 aa7.35□□□□□ -1.23
HDAC6-224ENST00000481929 HIST1H2BMQ99879 126 aa7.35□□□□□ -1.23
HDAC6-224ENST00000481929 TIMM17BO60830 172 aa7.34□□□□□ -1.23
HDAC6-224ENST00000481929 NHP2Q9NX24 153 aaKnown RBP7.34□□□□□ -1.23
HDAC6-224ENST00000481929 LST1O00453 97 aa7.33□□□□□ -1.24
HDAC6-224ENST00000481929 A4D1N5 150 aa7.32□□□□□ -1.24
HDAC6-224ENST00000481929 E9PLD3 99 aa7.32□□□□□ -1.24
HDAC6-224ENST00000481929 MPLKIPQ8TAP9 179 aa7.32□□□□□ -1.24
HDAC6-224ENST00000481929 HRES1P13985 223 aa7.29□□□□□ -1.24
HDAC6-224ENST00000481929 COA6Q5JTJ3 125 aaKnown RBP7.29□□□□□ -1.24
HDAC6-224ENST00000481929 TRAV13-2A0A0B4J235 113 aa7.28□□□□□ -1.24
HDAC6-224ENST00000481929 LOC105371267A0A1B0GV96 52 aa7.28□□□□□ -1.24
HDAC6-224ENST00000481929 SERF1AO75920 110 aa7.28□□□□□ -1.24
HDAC6-224ENST00000481929 LINC00310P59036 64 aa7.28□□□□□ -1.24
HDAC6-224ENST00000481929 SNRPEP62304 92 aaKnown RBP7.28□□□□□ -1.24
HDAC6-224ENST00000481929 HSPB8Q9UJY1 196 aa7.28□□□□□ -1.24
HDAC6-224ENST00000481929 A6NDN8 102 aa7.27□□□□□ -1.25
HDAC6-224ENST00000481929 MUC12Q9UKN1 5478 aa7.27□□□□□ -1.25
HDAC6-224ENST00000481929 ZNF815PA8K554 130 aa7.26□□□□□ -1.25
HDAC6-224ENST00000481929 KRTAP16-1A8MUX0 517 aa7.26□□□□□ -1.25
HDAC6-224ENST00000481929 S100A6P06703 90 aa7.26□□□□□ -1.25
HDAC6-224ENST00000481929 FABP4P15090 132 aa7.25□□□□□ -1.25
HDAC6-224ENST00000481929 OCIAD2Q56VL3 154 aa7.24□□□□□ -1.25
HDAC6-224ENST00000481929 HIST3H2BBQ8N257 126 aa7.24□□□□□ -1.25
HDAC6-224ENST00000481929 Q6ZVH6 145 aa7.23□□□□□ -1.25
HDAC6-224ENST00000481929 SS18L2Q9UHA2 77 aa7.23□□□□□ -1.25
HDAC6-224ENST00000481929 DSCR10P59022 87 aa7.22□□□□□ -1.25
HDAC6-224ENST00000481929 MTURNQ8N3F0 131 aa7.21□□□□□ -1.26
HDAC6-224ENST00000481929 Q8N9P0 234 aaPredicted RBP7.21□□□□□ -1.26
HDAC6-224ENST00000481929 A8MWP4 228 aa7.2□□□□□ -1.26
HDAC6-224ENST00000481929 Q6ZQY7 126 aa7.2□□□□□ -1.26
HDAC6-224ENST00000481929 COPS9Q8WXC6 57 aa7.2□□□□□ -1.26
HDAC6-224ENST00000481929 NOTCH2NLQ7Z3S9 236 aa7.19□□□□□ -1.26
HDAC6-224ENST00000481929 SMIM11BQ8TCY0 68 aa7.19□□□□□ -1.26
HDAC6-224ENST00000481929 HIST1H2BLQ99880 126 aa7.19□□□□□ -1.26
HDAC6-224ENST00000481929 TTTY13Q9BZ97 58 aa7.18□□□□□ -1.26
HDAC6-224ENST00000481929 LINC00575Q6W349 94 aa7.17□□□□□ -1.26
HDAC6-224ENST00000481929 IFITM1P13164 125 aa7.16□□□□□ -1.26
HDAC6-224ENST00000481929 S100A2P29034 98 aa7.16□□□□□ -1.26
HDAC6-224ENST00000481929 VAMP3Q15836 100 aa7.16□□□□□ -1.26
HDAC6-224ENST00000481929 hADV29S1A0JD25 119 aa7.15□□□□□ -1.26
HDAC6-224ENST00000481929 ANKRD39Q53RE8 183 aa7.15□□□□□ -1.26
HDAC6-224ENST00000481929 H3BUT2 72 aa7.14□□□□□ -1.27
HDAC6-224ENST00000481929 SCGB1D1O95968 90 aa7.14□□□□□ -1.27
HDAC6-224ENST00000481929 SCGB1D4Q6XE38 83 aa7.14□□□□□ -1.27
HDAC6-224ENST00000481929 SNHG12Q9BXW3 62 aa7.13□□□□□ -1.27
HDAC6-224ENST00000481929 LINC00313P59037 77 aa7.12□□□□□ -1.27
HDAC6-224ENST00000481929 SIGMAR1Q99720 223 aa7.12□□□□□ -1.27
HDAC6-224ENST00000481929 MUSTN1Q8IVN3 82 aa7.11□□□□□ -1.27
HDAC6-224ENST00000481929 PPDPFLQ8WWR9 84 aa7.11□□□□□ -1.27
HDAC6-224ENST00000481929 C3orf79P0CE67 100 aa7.1□□□□□ -1.27
HDAC6-224ENST00000481929 PYY3Q5JQD4 70 aa7.1□□□□□ -1.27
HDAC6-224ENST00000481929 A0A087WSZ3 146 aa7.09□□□□□ -1.27
HDAC6-224ENST00000481929 SYS1-DBNDD2H3BUS1 97 aa7.09□□□□□ -1.27
HDAC6-224ENST00000481929 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP7.09□□□□□ -1.27
HDAC6-224ENST00000481929 TEN1Q86WV5 123 aa7.09□□□□□ -1.27
HDAC6-224ENST00000481929 KRTDAPP60985 99 aa7.07□□□□□ -1.28
HDAC6-224ENST00000481929 LINC01545Q5VT33 79 aa7.06□□□□□ -1.28
HDAC6-224ENST00000481929 SMIM6P0DI80 62 aa7.05□□□□□ -1.28
HDAC6-224ENST00000481929 A6NN06 94 aa7.03□□□□□ -1.28
HDAC6-224ENST00000481929 PET117Q6UWS5 81 aa7.03□□□□□ -1.28
HDAC6-224ENST00000481929 MDN1Q9NU22 5596 aa7.03□□□□□ -1.28
HDAC6-224ENST00000481929 C12orf57Q99622 126 aa7.02□□□□□ -1.29
HDAC6-224ENST00000481929 IGKV4-1P06312 121 aa7□□□□□ -1.29
HDAC6-224ENST00000481929 GHRHP01286 108 aa6.99□□□□□ -1.29
HDAC6-224ENST00000481929 KRTAP5-9P26371 169 aa6.99□□□□□ -1.29
HDAC6-224ENST00000481929 SPINK7P58062 85 aa6.99□□□□□ -1.29
HDAC6-224ENST00000481929 ATOH7Q8N100 152 aa6.99□□□□□ -1.29
HDAC6-224ENST00000481929 KMT2DO14686 5537 aa6.98□□□□□ -1.29
HDAC6-224ENST00000481929 KRTAP2-3P0C7H8 128 aa6.98□□□□□ -1.29
HDAC6-224ENST00000481929 KRTAP2-4Q9BYR9 128 aa6.98□□□□□ -1.29
HDAC6-224ENST00000481929 NDUFV3P56181 108 aaKnown RBP6.95□□□□□ -1.3
HDAC6-224ENST00000481929 BVES-AS1Q5T3Y7 98 aa6.95□□□□□ -1.3
HDAC6-224ENST00000481929 IGHV6-1A0A0B4J1U7 121 aa6.94□□□□□ -1.3
HDAC6-224ENST00000481929 WFDC13Q8IUB5 93 aa6.94□□□□□ -1.3
HDAC6-224ENST00000481929 ZCCHC13Q8WW36 166 aaKnown RBP6.94□□□□□ -1.3
HDAC6-224ENST00000481929 VAMP8Q9BV40 100 aa6.93□□□□□ -1.3
HDAC6-224ENST00000481929 PAM16Q9Y3D7 125 aa6.93□□□□□ -1.3
HDAC6-224ENST00000481929 SPATA45Q537H7 98 aa6.92□□□□□ -1.3
HDAC6-224ENST00000481929 A0A1W2PNM2 257 aa6.91□□□□□ -1.3
HDAC6-224ENST00000481929 H3BMG7 143 aa6.9□□□□□ -1.3
HDAC6-224ENST00000481929 FAM218AQ96MZ4 157 aa6.9□□□□□ -1.3
HDAC6-224ENST00000481929 DEFB116Q30KQ4 102 aa6.89□□□□□ -1.31
HDAC6-224ENST00000481929 HSBP1L1C9JCN9 74 aa6.87□□□□□ -1.31
HDAC6-224ENST00000481929 SNCGO76070 127 aa6.87□□□□□ -1.31
HDAC6-224ENST00000481929 C14orf144Q96I85 54 aa6.87□□□□□ -1.31
HDAC6-224ENST00000481929 PCP4L1A6NKN8 68 aa6.86□□□□□ -1.31
HDAC6-224ENST00000481929 C8orf87E5RJ46 101 aa6.86□□□□□ -1.31
HDAC6-224ENST00000481929 COX8AP10176 69 aa6.85□□□□□ -1.31
HDAC6-224ENST00000481929 TSTD3H0UI37 97 aa6.84□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 236 ms