RNA–Protein interactions for RNA: ENST00000478596.5

USP11-207, Transcript of ubiquitin specific peptidase 11, humanhuman

TSL 3

Gene USP11, Length 970 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP11-207ENST00000478596 C9orf118A6NHY6 69 aa8.55□□□□□ -1.04
USP11-207ENST00000478596 TAX1BP3O14907 124 aa8.55□□□□□ -1.04
USP11-207ENST00000478596 FAM218AQ96MZ4 157 aa8.55□□□□□ -1.04
USP11-207ENST00000478596 FABP2P12104 132 aa8.54□□□□□ -1.04
USP11-207ENST00000478596 ANAPC11Q9NYG5 84 aa8.54□□□□□ -1.04
USP11-207ENST00000478596 A0A1B0GX51 115 aa8.53□□□□□ -1.04
USP11-207ENST00000478596 ATXN8Q156A1 80 aa8.53□□□□□ -1.04
USP11-207ENST00000478596 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP8.53□□□□□ -1.04
USP11-207ENST00000478596 A0A1W2PPM0 123 aa8.52□□□□□ -1.05
USP11-207ENST00000478596 CRYGAP11844 174 aa8.52□□□□□ -1.05
USP11-207ENST00000478596 C9orf153Q5TBE3 101 aa8.52□□□□□ -1.05
USP11-207ENST00000478596 IGLV9-49A0A0B4J1Y8 123 aa8.51□□□□□ -1.05
USP11-207ENST00000478596 TEX49A0A1B0GTD5 131 aa8.51□□□□□ -1.05
USP11-207ENST00000478596 F8WEM9 126 aa8.51□□□□□ -1.05
USP11-207ENST00000478596 GHRHP01286 108 aa8.51□□□□□ -1.05
USP11-207ENST00000478596 LST1O00453 97 aa8.5□□□□□ -1.05
USP11-207ENST00000478596 FAM229BQ4G0N7 80 aa8.5□□□□□ -1.05
USP11-207ENST00000478596 OCIAD2Q56VL3 154 aa8.5□□□□□ -1.05
USP11-207ENST00000478596 KRTAP9-7A8MTY7 169 aa8.49□□□□□ -1.05
USP11-207ENST00000478596 TCL1BO95988 128 aa8.49□□□□□ -1.05
USP11-207ENST00000478596 KRTAP1-4P0C5Y4 121 aa8.49□□□□□ -1.05
USP11-207ENST00000478596 ORMDL1Q9P0S3 153 aa8.49□□□□□ -1.05
USP11-207ENST00000478596 LAMTOR3Q9UHA4 124 aa8.49□□□□□ -1.05
USP11-207ENST00000478596 TRBV20-1A0A075B6N2 111 aa8.48□□□□□ -1.05
USP11-207ENST00000478596 TRACP01848 142 aa8.48□□□□□ -1.05
USP11-207ENST00000478596 LINC01547P58512 204 aaPredicted RBP8.48□□□□□ -1.05
USP11-207ENST00000478596 LINC00483Q53H64 154 aa8.48□□□□□ -1.05
USP11-207ENST00000478596 MOBPQ13875 183 aa8.47□□□□□ -1.05
USP11-207ENST00000478596 TYMSOSQ8TAI1 123 aa8.47□□□□□ -1.05
USP11-207ENST00000478596 SPCS1Q9Y6A9 102 aa8.47□□□□□ -1.05
USP11-207ENST00000478596 IGLV5-48A0A075B6I7 105 aa8.46□□□□□ -1.06
USP11-207ENST00000478596 A0A087X002 238 aa8.46□□□□□ -1.06
USP11-207ENST00000478596 C3orf22Q8N5N4 141 aa8.46□□□□□ -1.06
USP11-207ENST00000478596 PPDPFLQ8WWR9 84 aa8.46□□□□□ -1.06
USP11-207ENST00000478596 H3BQ85 93 aa8.44□□□□□ -1.06
USP11-207ENST00000478596 SPRR1BP22528 89 aa8.44□□□□□ -1.06
USP11-207ENST00000478596 Q8N377 158 aa8.44□□□□□ -1.06
USP11-207ENST00000478596 Q8NBF4 154 aa8.44□□□□□ -1.06
USP11-207ENST00000478596 A0A1B0GV72 72 aa8.42□□□□□ -1.06
USP11-207ENST00000478596 C9JAW5 83 aa8.42□□□□□ -1.06
USP11-207ENST00000478596 KRTAP13-2Q52LG2 175 aa8.41□□□□□ -1.06
USP11-207ENST00000478596 H3BMG7 143 aa8.4□□□□□ -1.06
USP11-207ENST00000478596 TMEM256-PLSCR3K7ERE1 68 aa8.4□□□□□ -1.06
USP11-207ENST00000478596 GTF2H5Q6ZYL4 71 aa8.4□□□□□ -1.06
USP11-207ENST00000478596 CDIP1Q9H305 208 aa8.4□□□□□ -1.06
USP11-207ENST00000478596 K7EP34 96 aa8.39□□□□□ -1.07
USP11-207ENST00000478596 BAALC-AS2P0C853 105 aa8.39□□□□□ -1.07
USP11-207ENST00000478596 MTURNQ8N3F0 131 aa8.39□□□□□ -1.07
USP11-207ENST00000478596 NDUFV3P56181 108 aaKnown RBP8.38□□□□□ -1.07
USP11-207ENST00000478596 TPRXLQ17RH7 258 aa8.38□□□□□ -1.07
USP11-207ENST00000478596 C4orf48Q5BLP8 95 aa8.38□□□□□ -1.07
USP11-207ENST00000478596 KRTAP9-1A8MXZ3 250 aaPredicted RBP8.37□□□□□ -1.07
USP11-207ENST00000478596 SMIM29Q86T20 159 aa8.37□□□□□ -1.07
USP11-207ENST00000478596 LINC00304Q8N9R0 145 aa8.37□□□□□ -1.07
USP11-207ENST00000478596 ANKRD29Q8N6D5 301 aa8.36□□□□□ -1.07
USP11-207ENST00000478596 H3BT86 120 aa8.34□□□□□ -1.07
USP11-207ENST00000478596 UBE2V1Q13404 147 aa8.34□□□□□ -1.07
USP11-207ENST00000478596 SSBP3-AS1Q7Z2R9 100 aa8.34□□□□□ -1.07
USP11-207ENST00000478596 Q6JHZ5 121 aa8.33□□□□□ -1.08
USP11-207ENST00000478596 HRCT1Q6UXD1 115 aa8.33□□□□□ -1.08
USP11-207ENST00000478596 A0A0G2JQZ4 141 aa8.29□□□□□ -1.08
USP11-207ENST00000478596 SPAG11AQ6PDA7 123 aa8.29□□□□□ -1.08
USP11-207ENST00000478596 IGFL1Q6UW32 110 aa8.29□□□□□ -1.08
USP11-207ENST00000478596 DSCR8Q96T75 97 aa8.29□□□□□ -1.08
USP11-207ENST00000478596 IGLV8-61A0A075B6I0 122 aa8.28□□□□□ -1.08
USP11-207ENST00000478596 A0A1B0GV90 55 aa8.28□□□□□ -1.08
USP11-207ENST00000478596 JMJD7-PLA2G4BH0Y9G9 81 aa8.28□□□□□ -1.08
USP11-207ENST00000478596 RBM3P98179 157 aaKnown RBP8.28□□□□□ -1.08
USP11-207ENST00000478596 VPS25Q9BRG1 176 aa8.28□□□□□ -1.08
USP11-207ENST00000478596 RETNLBQ9BQ08 111 aa8.27□□□□□ -1.09
USP11-207ENST00000478596 IGLV7-46A0A075B6I9 117 aa8.25□□□□□ -1.09
USP11-207ENST00000478596 SPINK1P00995 79 aa8.25□□□□□ -1.09
USP11-207ENST00000478596 LIMD2Q9BT23 127 aa8.25□□□□□ -1.09
USP11-207ENST00000478596 C14orf132Q9NPU4 83 aa8.24□□□□□ -1.09
USP11-207ENST00000478596 CCKP06307 115 aa8.23□□□□□ -1.09
USP11-207ENST00000478596 CD164Q04900 197 aa8.23□□□□□ -1.09
USP11-207ENST00000478596 ASB16-AS1Q495Z4 193 aa8.23□□□□□ -1.09
USP11-207ENST00000478596 KRTAP4-1Q9BYQ7 146 aa8.23□□□□□ -1.09
USP11-207ENST00000478596 F8W1H4 67 aa8.22□□□□□ -1.09
USP11-207ENST00000478596 LCE2CQ5TA81 110 aa8.21□□□□□ -1.1
USP11-207ENST00000478596 PRO0461Q9UI25 63 aa8.21□□□□□ -1.1
USP11-207ENST00000478596 SMCPP49901 116 aaPredicted RBP8.2□□□□□ -1.1
USP11-207ENST00000478596 TEN1Q86WV5 123 aa8.2□□□□□ -1.1
USP11-207ENST00000478596 TRBV7-4A0A0J9YYF1 115 aa8.19□□□□□ -1.1
USP11-207ENST00000478596 TRBV7-7A0A0K0K1E9 115 aa8.19□□□□□ -1.1
USP11-207ENST00000478596 PDE6GP18545 87 aa8.19□□□□□ -1.1
USP11-207ENST00000478596 RPS29P62273 56 aaKnown RBP8.18□□□□□ -1.1
USP11-207ENST00000478596 SS18L2Q9UHA2 77 aa8.18□□□□□ -1.1
USP11-207ENST00000478596 A0A087WSZ3 146 aa8.17□□□□□ -1.1
USP11-207ENST00000478596 LOC110117498A0A087WWA1 95 aa8.17□□□□□ -1.1
USP11-207ENST00000478596 A0A1W2PNM2 257 aa8.16□□□□□ -1.1
USP11-207ENST00000478596 LORP23490 312 aaPredicted RBP8.16□□□□□ -1.1
USP11-207ENST00000478596 C21orf62-AS1Q17RA5 79 aa8.16□□□□□ -1.1
USP11-207ENST00000478596 Q6Q795 121 aa8.16□□□□□ -1.1
USP11-207ENST00000478596 MT1HP80294 61 aa8.15□□□□□ -1.1
USP11-207ENST00000478596 Q6ZQT0 140 aa8.15□□□□□ -1.1
USP11-207ENST00000478596 OBSCN-AS1Q96MR7 158 aa8.15□□□□□ -1.1
USP11-207ENST00000478596 ETDBQ3ZM63 59 aa8.14□□□□□ -1.11
USP11-207ENST00000478596 KRTAP10-6P60371 365 aaPredicted RBP8.11□□□□□ -1.11
USP11-207ENST00000478596 SEC61BP60468 96 aaKnown RBP8.11□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 73.8 ms