RNA–Protein interactions for RNA: ENST00000477939.1

TRA2B-211, Transcript of transformer 2 beta homolog, humanhuman

TSL 2

Gene TRA2B, Length 530 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRA2B-211ENST00000477939 K7EQD1 137 aa3.88□□□□□ -1.79
TRA2B-211ENST00000477939 INSP01308 110 aa3.88□□□□□ -1.79
TRA2B-211ENST00000477939 POLR2KP53803 58 aaKnown RBP3.88□□□□□ -1.79
TRA2B-211ENST00000477939 C9orf47Q6ZRZ4 202 aa3.88□□□□□ -1.79
TRA2B-211ENST00000477939 LINC00528Q8N1L1 170 aa3.88□□□□□ -1.79
TRA2B-211ENST00000477939 RPL36ALQ969Q0 106 aaKnown RBP3.88□□□□□ -1.79
TRA2B-211ENST00000477939 GAS8-AS1O95177 125 aa3.87□□□□□ -1.79
TRA2B-211ENST00000477939 DEFB130BP0DP73 79 aa3.87□□□□□ -1.79
TRA2B-211ENST00000477939 DEFB130AP0DP74 79 aa3.87□□□□□ -1.79
TRA2B-211ENST00000477939 CNBPP62633 177 aaKnown RBP3.87□□□□□ -1.79
TRA2B-211ENST00000477939 SPAG11BQ08648 103 aa3.87□□□□□ -1.79
TRA2B-211ENST00000477939 SPAG11AQ6PDA7 123 aa3.87□□□□□ -1.79
TRA2B-211ENST00000477939 CAMK2N2Q96S95 79 aa3.87□□□□□ -1.79
TRA2B-211ENST00000477939 A0A087WYN8 130 aa3.86□□□□□ -1.79
TRA2B-211ENST00000477939 NBDYA0A0U1RRE5 68 aa3.86□□□□□ -1.79
TRA2B-211ENST00000477939 ETDCA0A1B0GVM5 59 aa3.86□□□□□ -1.79
TRA2B-211ENST00000477939 IGKV2-29A2NJV5 120 aaPredicted RBP3.86□□□□□ -1.79
TRA2B-211ENST00000477939 A8MU10 97 aa3.86□□□□□ -1.79
TRA2B-211ENST00000477939 CHTF8P0CG12 524 aa3.86□□□□□ -1.79
TRA2B-211ENST00000477939 RNASE13Q5GAN3 156 aaKnown RBP3.86□□□□□ -1.79
TRA2B-211ENST00000477939 PRAC1Q96KF2 57 aa3.86□□□□□ -1.79
TRA2B-211ENST00000477939 KRTAP1-5Q9BYS1 174 aa3.86□□□□□ -1.79
TRA2B-211ENST00000477939 IGLV5-45A0A087WSX0 123 aa3.85□□□□□ -1.79
TRA2B-211ENST00000477939 HTN1P15515 57 aa3.85□□□□□ -1.79
TRA2B-211ENST00000477939 NTM-AS1Q6ZSK4 140 aa3.85□□□□□ -1.79
TRA2B-211ENST00000477939 C16orf74Q96GX8 76 aa3.85□□□□□ -1.79
TRA2B-211ENST00000477939 PLAC8Q9NZF1 115 aa3.85□□□□□ -1.79
TRA2B-211ENST00000477939 HERC1Q15751 4861 aa3.84□□□□□ -1.79
TRA2B-211ENST00000477939 IGLV4-3A0A075B6K6 122 aa3.84□□□□□ -1.79
TRA2B-211ENST00000477939 A0A087WSZ3 146 aa3.84□□□□□ -1.79
TRA2B-211ENST00000477939 CCL18P55774 89 aa3.84□□□□□ -1.79
TRA2B-211ENST00000477939 LINC00612Q8N6U2 182 aa3.84□□□□□ -1.79
TRA2B-211ENST00000477939 SMIM11BQ8TCY0 68 aa3.84□□□□□ -1.79
TRA2B-211ENST00000477939 NOP10Q9NPE3 64 aaKnown RBP3.84□□□□□ -1.79
TRA2B-211ENST00000477939 FAT1Q14517 4588 aa3.83□□□□□ -1.8
TRA2B-211ENST00000477939 IGHV3-64A0A075B6Q5 118 aa3.83□□□□□ -1.8
TRA2B-211ENST00000477939 TRGV2A0A075B6R0 118 aa3.83□□□□□ -1.8
TRA2B-211ENST00000477939 IGLV5-39A0A0G2JS06 123 aa3.83□□□□□ -1.8
TRA2B-211ENST00000477939 PRAC2D3DTV9 90 aa3.83□□□□□ -1.8
TRA2B-211ENST00000477939 H0Y9P7 68 aa3.83□□□□□ -1.8
TRA2B-211ENST00000477939 MGPP08493 103 aa3.83□□□□□ -1.8
TRA2B-211ENST00000477939 MIR22HGQ0VDD5 57 aa3.83□□□□□ -1.8
TRA2B-211ENST00000477939 C9orf129Q5T035 196 aaKnown RBP3.83□□□□□ -1.8
TRA2B-211ENST00000477939 C11orf21Q9P2W6 132 aa3.83□□□□□ -1.8
TRA2B-211ENST00000477939 IGHV3-53P01767 116 aa3.82□□□□□ -1.8
TRA2B-211ENST00000477939 KRTAP10-2P60368 255 aa3.82□□□□□ -1.8
TRA2B-211ENST00000477939 Q8NDZ9 215 aa3.82□□□□□ -1.8
TRA2B-211ENST00000477939 KCNQ1DNQ9H478 68 aa3.82□□□□□ -1.8
TRA2B-211ENST00000477939 MYCBP2O75592 4640 aa3.82□□□□□ -1.8
TRA2B-211ENST00000477939 IGKV4-1P06312 121 aa3.81□□□□□ -1.8
TRA2B-211ENST00000477939 REG3GQ6UW15 175 aa3.81□□□□□ -1.8
TRA2B-211ENST00000477939 Q6ZTI0 123 aa3.81□□□□□ -1.8
TRA2B-211ENST00000477939 Q8N1X5 172 aa3.81□□□□□ -1.8
TRA2B-211ENST00000477939 RPL39LQ96EH5 51 aaKnown RBP3.81□□□□□ -1.8
TRA2B-211ENST00000477939 IGLV10-54A0A075B6I4 117 aa3.8□□□□□ -1.8
TRA2B-211ENST00000477939 A0A096LPF7 62 aa3.8□□□□□ -1.8
TRA2B-211ENST00000477939 H3BNG1 76 aa3.8□□□□□ -1.8
TRA2B-211ENST00000477939 COX7BP24311 80 aa3.8□□□□□ -1.8
TRA2B-211ENST00000477939 LINC00315P59091 139 aa3.8□□□□□ -1.8
TRA2B-211ENST00000477939 RPL39P62891 51 aaKnown RBP3.8□□□□□ -1.8
TRA2B-211ENST00000477939 Q6ZRN7 208 aaPredicted RBP3.8□□□□□ -1.8
TRA2B-211ENST00000477939 DMBT1Q9UGM3 2413 aaPredicted RBP3.79□□□□□ -1.8
TRA2B-211ENST00000477939 IGKV2-40A0A087WW87 121 aaPredicted RBP3.79□□□□□ -1.8
TRA2B-211ENST00000477939 IGHV3-38A0A0C4DH36 116 aa3.79□□□□□ -1.8
TRA2B-211ENST00000477939 A0A1W2PNM2 257 aa3.79□□□□□ -1.8
TRA2B-211ENST00000477939 IGKV2D-40P01614 121 aaPredicted RBP3.79□□□□□ -1.8
TRA2B-211ENST00000477939 PRR9Q5T870 116 aa3.79□□□□□ -1.8
TRA2B-211ENST00000477939 CSAG1Q6PB30 78 aa3.79□□□□□ -1.8
TRA2B-211ENST00000477939 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP3.79□□□□□ -1.8
TRA2B-211ENST00000477939 CHCHD7Q9BUK0 85 aa3.79□□□□□ -1.8
TRA2B-211ENST00000477939 IGLV1-50A0A075B6I6 118 aa3.78□□□□□ -1.8
TRA2B-211ENST00000477939 IGLV2-33A0A075B6J2 118 aaPredicted RBP3.78□□□□□ -1.8
TRA2B-211ENST00000477939 TRGV1A0A0A0MS02 117 aa3.78□□□□□ -1.8
TRA2B-211ENST00000477939 PRR4Q16378 134 aa3.78□□□□□ -1.8
TRA2B-211ENST00000477939 LUZP6Q538Z0 58 aa3.78□□□□□ -1.8
TRA2B-211ENST00000477939 IGKV2D-29A0A075B6S2 120 aaPredicted RBP3.77□□□□□ -1.81
TRA2B-211ENST00000477939 TRGV4A0A0C4DH28 118 aa3.77□□□□□ -1.81
TRA2B-211ENST00000477939 TRBV6-4A0A1B0GX49 114 aa3.77□□□□□ -1.81
TRA2B-211ENST00000477939 UQCR11O14957 56 aa3.77□□□□□ -1.81
TRA2B-211ENST00000477939 DNAH10OSP0CZ25 163 aa3.77□□□□□ -1.81
TRA2B-211ENST00000477939 COA5Q86WW8 74 aa3.77□□□□□ -1.81
TRA2B-211ENST00000477939 Q8TAT8 98 aa3.77□□□□□ -1.81
TRA2B-211ENST00000477939 DMAC1Q96GE9 116 aa3.77□□□□□ -1.81
TRA2B-211ENST00000477939 C8orf17Q9NRJ1 99 aa3.77□□□□□ -1.81
TRA2B-211ENST00000477939 FLG2Q5D862 2391 aaPredicted RBP3.77□□□□□ -1.81
TRA2B-211ENST00000477939 HIGD2BQ4VC39 106 aa3.76□□□□□ -1.81
TRA2B-211ENST00000477939 C1orf137Q5JT78 98 aa3.76□□□□□ -1.81
TRA2B-211ENST00000477939 SUMO4Q6EEV6 95 aa3.76□□□□□ -1.81
TRA2B-211ENST00000477939 CAMK2N1Q7Z7J9 78 aa3.76□□□□□ -1.81
TRA2B-211ENST00000477939 VPS13BQ7Z7G8 4022 aa3.76□□□□□ -1.81
TRA2B-211ENST00000477939 IGLV4-60A0A075B6I1 120 aa3.75□□□□□ -1.81
TRA2B-211ENST00000477939 IGLV7-46A0A075B6I9 117 aa3.75□□□□□ -1.81
TRA2B-211ENST00000477939 IGKV2-28A0A075B6P5 120 aa3.75□□□□□ -1.81
TRA2B-211ENST00000477939 IGKV2D-28P01615 120 aa3.75□□□□□ -1.81
TRA2B-211ENST00000477939 SLPIP03973 132 aa3.75□□□□□ -1.81
TRA2B-211ENST00000477939 SPATA8Q6RVD6 105 aa3.75□□□□□ -1.81
TRA2B-211ENST00000477939 WFDC10BQ8IUB3 73 aa3.75□□□□□ -1.81
TRA2B-211ENST00000477939 PRO0255Q9UI72 69 aa3.75□□□□□ -1.81
TRA2B-211ENST00000477939 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP3.75□□□□□ -1.81
TRA2B-211ENST00000477939 A0A087WTM6 91 aa3.74□□□□□ -1.81
Retrieved 100 of 20,778 RNA–protein pairs in 97.5 ms