RNA–Protein interactions for RNA: ENST00000477888.1

SPTLC1-205, Transcript of serine palmitoyltransferase long chain base subunit 1, humanhuman

TSL 5

Gene SPTLC1, Length 359 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTLC1-205ENST00000477888 A0A096LNJ9 63 aa3.49□□□□□ -1.85
SPTLC1-205ENST00000477888 BAGE3Q86Y29 109 aa3.49□□□□□ -1.85
SPTLC1-205ENST00000477888 KRTAP9-4Q9BYQ2 154 aa3.49□□□□□ -1.85
SPTLC1-205ENST00000477888 RBM12B-AS1Q9P1G2 102 aa3.49□□□□□ -1.85
SPTLC1-205ENST00000477888 CBY1Q9Y3M2 126 aa3.49□□□□□ -1.85
SPTLC1-205ENST00000477888 A6NDN8 102 aa3.48□□□□□ -1.85
SPTLC1-205ENST00000477888 A6NN06 94 aa3.48□□□□□ -1.85
SPTLC1-205ENST00000477888 IGFL1Q6UW32 110 aa3.48□□□□□ -1.85
SPTLC1-205ENST00000477888 TCTE3Q8IZS6 198 aa3.48□□□□□ -1.85
SPTLC1-205ENST00000477888 GPR98Q8WXG9 6306 aa3.48□□□□□ -1.85
SPTLC1-205ENST00000477888 LCE4AQ5TA78 99 aa3.47□□□□□ -1.85
SPTLC1-205ENST00000477888 Q6ZVH6 145 aa3.47□□□□□ -1.85
SPTLC1-205ENST00000477888 KRTAP9-9Q9BYP9 154 aa3.47□□□□□ -1.85
SPTLC1-205ENST00000477888 MYMXA0A1B0GTQ4 84 aa3.46□□□□□ -1.86
SPTLC1-205ENST00000477888 A8MWP4 228 aa3.46□□□□□ -1.86
SPTLC1-205ENST00000477888 HBDP02042 147 aa3.46□□□□□ -1.86
SPTLC1-205ENST00000477888 PEA15Q15121 130 aa3.46□□□□□ -1.86
SPTLC1-205ENST00000477888 IGLV5-48A0A075B6I7 105 aa3.45□□□□□ -1.86
SPTLC1-205ENST00000477888 NDUFAF8A1L188 74 aa3.45□□□□□ -1.86
SPTLC1-205ENST00000477888 SMCO4Q9NRQ5 59 aa3.45□□□□□ -1.86
SPTLC1-205ENST00000477888 MT-ND4LP03901 98 aa3.44□□□□□ -1.86
SPTLC1-205ENST00000477888 ELOF1P60002 83 aaKnown RBP3.44□□□□□ -1.86
SPTLC1-205ENST00000477888 SOSTDC1Q6X4U4 206 aa3.44□□□□□ -1.86
SPTLC1-205ENST00000477888 MIEN1Q9BRT3 115 aa3.44□□□□□ -1.86
SPTLC1-205ENST00000477888 KRTAP4-8A0A0G2JLE6 195 aa3.43□□□□□ -1.86
SPTLC1-205ENST00000477888 SERF1AO75920 110 aa3.43□□□□□ -1.86
SPTLC1-205ENST00000477888 COA6Q5JTJ3 125 aaKnown RBP3.43□□□□□ -1.86
SPTLC1-205ENST00000477888 COMMD7Q86VX2 200 aa3.43□□□□□ -1.86
SPTLC1-205ENST00000477888 RPS10P5Q9NQ39 176 aa3.43□□□□□ -1.86
SPTLC1-205ENST00000477888 TRBV7-7A0A0K0K1E9 115 aa3.42□□□□□ -1.86
SPTLC1-205ENST00000477888 COX7BP24311 80 aa3.42□□□□□ -1.86
SPTLC1-205ENST00000477888 TSPEAR-AS2P59090 65 aa3.42□□□□□ -1.86
SPTLC1-205ENST00000477888 RHEBQ15382 184 aa3.42□□□□□ -1.86
SPTLC1-205ENST00000477888 LINC00614P0C842 121 aa3.41□□□□□ -1.86
SPTLC1-205ENST00000477888 IFITM2Q01629 132 aa3.41□□□□□ -1.86
SPTLC1-205ENST00000477888 PMCHL1Q16048 86 aa3.41□□□□□ -1.86
SPTLC1-205ENST00000477888 TRAV12-1A0A0B4J245 112 aa3.4□□□□□ -1.87
SPTLC1-205ENST00000477888 A0A0J9YXY3 114 aa3.4□□□□□ -1.87
SPTLC1-205ENST00000477888 SPRR2EP22531 72 aa3.4□□□□□ -1.87
SPTLC1-205ENST00000477888 SPRR2BP35325 72 aa3.4□□□□□ -1.87
SPTLC1-205ENST00000477888 SPRR2AP35326 72 aa3.4□□□□□ -1.87
SPTLC1-205ENST00000477888 FAM240AA0A1B0GVK7 77 aa3.39□□□□□ -1.87
SPTLC1-205ENST00000477888 KRTAP10-5P60370 271 aa3.39□□□□□ -1.87
SPTLC1-205ENST00000477888 NPC2P61916 151 aa3.39□□□□□ -1.87
SPTLC1-205ENST00000477888 OR13C6PQ8NH95 151 aa3.39□□□□□ -1.87
SPTLC1-205ENST00000477888 TRBV7-6A0A0J9YX20 115 aa3.38□□□□□ -1.87
SPTLC1-205ENST00000477888 LST1O00453 97 aa3.38□□□□□ -1.87
SPTLC1-205ENST00000477888 LEPROTO15243 131 aa3.38□□□□□ -1.87
SPTLC1-205ENST00000477888 MT1BP07438 61 aa3.38□□□□□ -1.87
SPTLC1-205ENST00000477888 SPANXDQ9BXN6 97 aa3.38□□□□□ -1.87
SPTLC1-205ENST00000477888 J3QQQ9 107 aa3.37□□□□□ -1.87
SPTLC1-205ENST00000477888 SLC7A5P1Q8MH63 180 aa3.37□□□□□ -1.87
SPTLC1-205ENST00000477888 SPANXCQ9NY87 97 aa3.37□□□□□ -1.87
SPTLC1-205ENST00000477888 NMUP48645 174 aa3.36□□□□□ -1.87
SPTLC1-205ENST00000477888 FABP9Q0Z7S8 132 aa3.36□□□□□ -1.87
SPTLC1-205ENST00000477888 Q6JHZ5 121 aa3.36□□□□□ -1.87
SPTLC1-205ENST00000477888 C18orf32Q8TCD1 76 aa3.36□□□□□ -1.87
SPTLC1-205ENST00000477888 CLEC2BQ92478 149 aa3.36□□□□□ -1.87
SPTLC1-205ENST00000477888 IFI27L1Q96BM0 104 aa3.36□□□□□ -1.87
SPTLC1-205ENST00000477888 DSCR10P59022 87 aa3.35□□□□□ -1.87
SPTLC1-205ENST00000477888 HERVK_113P61574 105 aa3.35□□□□□ -1.87
SPTLC1-205ENST00000477888 LCE5AQ5TCM9 118 aa3.35□□□□□ -1.87
SPTLC1-205ENST00000477888 SPRR2FQ96RM1 72 aa3.35□□□□□ -1.87
SPTLC1-205ENST00000477888 F8WEM9 126 aa3.34□□□□□ -1.87
SPTLC1-205ENST00000477888 LINC00308Q8TCZ7 52 aa3.34□□□□□ -1.87
SPTLC1-205ENST00000477888 SEC11CQ9BY50 192 aa3.34□□□□□ -1.87
SPTLC1-205ENST00000477888 SMIM26A0A096LP01 95 aa3.33□□□□□ -1.88
SPTLC1-205ENST00000477888 COX19Q49B96 90 aa3.33□□□□□ -1.88
SPTLC1-205ENST00000477888 LCE1AQ5T7P2 110 aa3.33□□□□□ -1.88
SPTLC1-205ENST00000477888 ZNF815PA8K554 130 aa3.32□□□□□ -1.88
SPTLC1-205ENST00000477888 OCIAD2Q56VL3 154 aa3.32□□□□□ -1.88
SPTLC1-205ENST00000477888 PSMB2P49721 201 aa3.31□□□□□ -1.88
SPTLC1-205ENST00000477888 KRTAP19-8Q3LI54 63 aa3.31□□□□□ -1.88
SPTLC1-205ENST00000477888 LCE1DQ5T752 114 aa3.31□□□□□ -1.88
SPTLC1-205ENST00000477888 Q5VV11 94 aa3.31□□□□□ -1.88
SPTLC1-205ENST00000477888 KRTAP4-7Q9BYR0 210 aa3.31□□□□□ -1.88
SPTLC1-205ENST00000477888 TRAV13-2A0A0B4J235 113 aa3.3□□□□□ -1.88
SPTLC1-205ENST00000477888 LINC00313P59037 77 aa3.3□□□□□ -1.88
SPTLC1-205ENST00000477888 CAMK2N1Q7Z7J9 78 aa3.3□□□□□ -1.88
SPTLC1-205ENST00000477888 NDUFS5O43920 106 aa3.29□□□□□ -1.88
SPTLC1-205ENST00000477888 SPRR2DP22532 72 aa3.29□□□□□ -1.88
SPTLC1-205ENST00000477888 SPINK7P58062 85 aa3.29□□□□□ -1.88
SPTLC1-205ENST00000477888 CEND1Q8N111 149 aa3.29□□□□□ -1.88
SPTLC1-205ENST00000477888 NHP2Q9NX24 153 aaKnown RBP3.29□□□□□ -1.88
SPTLC1-205ENST00000477888 SS18L2Q9UHA2 77 aa3.29□□□□□ -1.88
SPTLC1-205ENST00000477888 A0A1W2PNM2 257 aa3.28□□□□□ -1.88
SPTLC1-205ENST00000477888 COLCA2A8K830 154 aa3.28□□□□□ -1.88
SPTLC1-205ENST00000477888 S100PP25815 95 aa3.28□□□□□ -1.88
SPTLC1-205ENST00000477888 PLNP26678 52 aa3.28□□□□□ -1.88
SPTLC1-205ENST00000477888 PSPHP1O15172 72 aa3.27□□□□□ -1.89
SPTLC1-205ENST00000477888 TIMM17BO60830 172 aa3.27□□□□□ -1.89
SPTLC1-205ENST00000477888 CHCHD1Q96BP2 118 aaKnown RBP3.27□□□□□ -1.89
SPTLC1-205ENST00000477888 PRO0628Q9UI54 55 aa3.26□□□□□ -1.89
SPTLC1-205ENST00000477888 TRAPPC1Q9Y5R8 145 aa3.26□□□□□ -1.89
SPTLC1-205ENST00000477888 H3BUT2 72 aa3.25□□□□□ -1.89
SPTLC1-205ENST00000477888 DPM2O94777 84 aa3.25□□□□□ -1.89
SPTLC1-205ENST00000477888 Q6ZQY7 126 aa3.25□□□□□ -1.89
SPTLC1-205ENST00000477888 SPRR2GQ9BYE4 73 aa3.25□□□□□ -1.89
SPTLC1-205ENST00000477888 A0A087WSZ3 146 aa3.24□□□□□ -1.89
SPTLC1-205ENST00000477888 LINC00575Q6W349 94 aa3.24□□□□□ -1.89
Retrieved 100 of 20,778 RNA–protein pairs in 55.7 ms