RNA–Protein interactions for RNA: ENST00000476183.2

LIME1-204, Transcript of Lck interacting transmembrane adaptor 1, humanhuman

APPRIS ALT2 TSL 5

Gene LIME1, Length 809 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIME1-204ENST00000476183 BVES-AS1Q5T3Y7 98 aa11.65□□□□□ -0.54
LIME1-204ENST00000476183 Q5XG85 94 aa11.65□□□□□ -0.54
LIME1-204ENST00000476183 RAB37Q96AX2 223 aa11.63□□□□□ -0.55
LIME1-204ENST00000476183 A0A0B4J2C4 111 aa11.62□□□□□ -0.55
LIME1-204ENST00000476183 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP11.62□□□□□ -0.55
LIME1-204ENST00000476183 KRTAP4-1Q9BYQ7 146 aa11.62□□□□□ -0.55
LIME1-204ENST00000476183 F8WEM9 126 aa11.61□□□□□ -0.55
LIME1-204ENST00000476183 SEC61BP60468 96 aaKnown RBP11.61□□□□□ -0.55
LIME1-204ENST00000476183 PYY3Q5JQD4 70 aa11.61□□□□□ -0.55
LIME1-204ENST00000476183 C1orf195Q5TG92 126 aa11.6□□□□□ -0.55
LIME1-204ENST00000476183 CEND1Q8N111 149 aa11.6□□□□□ -0.55
LIME1-204ENST00000476183 IGLV8-61A0A075B6I0 122 aa11.59□□□□□ -0.55
LIME1-204ENST00000476183 C9orf92A6NGG3 77 aa11.58□□□□□ -0.56
LIME1-204ENST00000476183 FXYD2P54710 66 aa11.56□□□□□ -0.56
LIME1-204ENST00000476183 OCIAD2Q56VL3 154 aa11.56□□□□□ -0.56
LIME1-204ENST00000476183 LCE2AQ5TA79 106 aaPredicted RBP11.56□□□□□ -0.56
LIME1-204ENST00000476183 IGFL1Q6UW32 110 aa11.56□□□□□ -0.56
LIME1-204ENST00000476183 FAM218AQ96MZ4 157 aa11.56□□□□□ -0.56
LIME1-204ENST00000476183 Q6JHZ5 121 aa11.55□□□□□ -0.56
LIME1-204ENST00000476183 TMA7Q9Y2S6 64 aaKnown RBP11.55□□□□□ -0.56
LIME1-204ENST00000476183 PPDPFLQ8WWR9 84 aa11.54□□□□□ -0.56
LIME1-204ENST00000476183 CLEC2BQ92478 149 aa11.53□□□□□ -0.56
LIME1-204ENST00000476183 H0YGX0 51 aa11.52□□□□□ -0.57
LIME1-204ENST00000476183 PRO1854Q9UHT4 67 aa11.52□□□□□ -0.57
LIME1-204ENST00000476183 TMEM238LA0A1B0GVL6 79 aa11.51□□□□□ -0.57
LIME1-204ENST00000476183 A6NJY4 79 aa11.51□□□□□ -0.57
LIME1-204ENST00000476183 TCL1BO95988 128 aa11.51□□□□□ -0.57
LIME1-204ENST00000476183 SNHG12Q9BXW3 62 aa11.51□□□□□ -0.57
LIME1-204ENST00000476183 TRBV7-7A0A0K0K1E9 115 aa11.49□□□□□ -0.57
LIME1-204ENST00000476183 H3BUT2 72 aa11.49□□□□□ -0.57
LIME1-204ENST00000476183 HSD52Q0P140 79 aa11.46□□□□□ -0.57
LIME1-204ENST00000476183 TRIAP1O43715 76 aa11.45□□□□□ -0.58
LIME1-204ENST00000476183 SNCGO76070 127 aa11.45□□□□□ -0.58
LIME1-204ENST00000476183 PCOTHQ58A44 107 aa11.44□□□□□ -0.58
LIME1-204ENST00000476183 K7ERJ3 54 aa11.43□□□□□ -0.58
LIME1-204ENST00000476183 A0A1B0GX51 115 aa11.42□□□□□ -0.58
LIME1-204ENST00000476183 NDUFV3P56181 108 aaKnown RBP11.41□□□□□ -0.58
LIME1-204ENST00000476183 UQCR10Q9UDW1 63 aa11.4□□□□□ -0.58
LIME1-204ENST00000476183 Q6Q795 121 aa11.36□□□□□ -0.59
LIME1-204ENST00000476183 FABP2P12104 132 aa11.35□□□□□ -0.59
LIME1-204ENST00000476183 RPL37P61927 97 aaKnown RBP11.34□□□□□ -0.59
LIME1-204ENST00000476183 H3BMG7 143 aa11.33□□□□□ -0.6
LIME1-204ENST00000476183 PSMB2P49721 201 aa11.33□□□□□ -0.6
LIME1-204ENST00000476183 LST1O00453 97 aa11.32□□□□□ -0.6
LIME1-204ENST00000476183 TEN1Q86WV5 123 aa11.32□□□□□ -0.6
LIME1-204ENST00000476183 GHRHP01286 108 aa11.31□□□□□ -0.6
LIME1-204ENST00000476183 KRTAP19-2Q3LHN2 52 aa11.3□□□□□ -0.6
LIME1-204ENST00000476183 LCE2CQ5TA81 110 aa11.29□□□□□ -0.6
LIME1-204ENST00000476183 SS18L2Q9UHA2 77 aa11.28□□□□□ -0.6
LIME1-204ENST00000476183 A0A087WSZ3 146 aa11.27□□□□□ -0.61
LIME1-204ENST00000476183 DNAL4O96015 105 aa11.27□□□□□ -0.61
LIME1-204ENST00000476183 COX6CP09669 75 aa11.27□□□□□ -0.61
LIME1-204ENST00000476183 ORMDL1Q9P0S3 153 aa11.27□□□□□ -0.61
LIME1-204ENST00000476183 A0A1W2PNM2 257 aa11.26□□□□□ -0.61
LIME1-204ENST00000476183 OBSCN-AS1Q96MR7 158 aa11.26□□□□□ -0.61
LIME1-204ENST00000476183 A0A1B0GV72 72 aa11.23□□□□□ -0.61
LIME1-204ENST00000476183 Q96NJ1 140 aa11.22□□□□□ -0.61
LIME1-204ENST00000476183 H3BQ85 93 aa11.21□□□□□ -0.61
LIME1-204ENST00000476183 TMEM256-PLSCR3K7ERE1 68 aa11.2□□□□□ -0.62
LIME1-204ENST00000476183 KRTAP9-2Q9BYQ4 174 aa11.2□□□□□ -0.62
LIME1-204ENST00000476183 ANKRD29Q8N6D5 301 aa11.19□□□□□ -0.62
LIME1-204ENST00000476183 TRACP01848 142 aa11.17□□□□□ -0.62
LIME1-204ENST00000476183 SCGB1C2P0DMR2 95 aa11.17□□□□□ -0.62
LIME1-204ENST00000476183 Q75L30 129 aa11.17□□□□□ -0.62
LIME1-204ENST00000476183 UBE2V1Q13404 147 aa11.15□□□□□ -0.62
LIME1-204ENST00000476183 TRBV7-4A0A0J9YYF1 115 aa11.14□□□□□ -0.63
LIME1-204ENST00000476183 MT1HP80294 61 aa11.12□□□□□ -0.63
LIME1-204ENST00000476183 CCKP06307 115 aa11.1□□□□□ -0.63
LIME1-204ENST00000476183 SMIM6P0DI80 62 aa11.1□□□□□ -0.63
LIME1-204ENST00000476183 ATP11AUNQ6ZP68 121 aa11.09□□□□□ -0.63
LIME1-204ENST00000476183 M0R143 59 aa11.08□□□□□ -0.64
LIME1-204ENST00000476183 C20orf166-AS1Q96NR2 134 aa11.08□□□□□ -0.64
LIME1-204ENST00000476183 SIGMAR1Q99720 223 aa11.08□□□□□ -0.64
LIME1-204ENST00000476183 DSCR10P59022 87 aa11.07□□□□□ -0.64
LIME1-204ENST00000476183 NAA38Q9BRA0 125 aaKnown RBP11.07□□□□□ -0.64
LIME1-204ENST00000476183 A8MUU9 505 aa11.06□□□□□ -0.64
LIME1-204ENST00000476183 BAALC-AS2P0C853 105 aa11.05□□□□□ -0.64
LIME1-204ENST00000476183 FLGP20930 4061 aaPredicted RBP11.05□□□□□ -0.64
LIME1-204ENST00000476183 IGKV4-1P06312 121 aa11.04□□□□□ -0.64
LIME1-204ENST00000476183 RBM3P98179 157 aaKnown RBP11.04□□□□□ -0.64
LIME1-204ENST00000476183 LINC00472Q9H8W2 130 aa11.04□□□□□ -0.64
LIME1-204ENST00000476183 DEFB116Q30KQ4 102 aa11.03□□□□□ -0.64
LIME1-204ENST00000476183 VPS25Q9BRG1 176 aa11.01□□□□□ -0.65
LIME1-204ENST00000476183 DSCR8Q96T75 97 aa10.99□□□□□ -0.65
LIME1-204ENST00000476183 LINC00313P59037 77 aa10.98□□□□□ -0.65
LIME1-204ENST00000476183 ATXN8Q156A1 80 aa10.98□□□□□ -0.65
LIME1-204ENST00000476183 COX6B2Q6YFQ2 88 aa10.98□□□□□ -0.65
LIME1-204ENST00000476183 NOTCH2NLQ7Z3S9 236 aa10.98□□□□□ -0.65
LIME1-204ENST00000476183 KRTAP16-1A8MUX0 517 aa10.97□□□□□ -0.65
LIME1-204ENST00000476183 LOC105371267A0A1B0GV96 52 aa10.94□□□□□ -0.66
LIME1-204ENST00000476183 C9JAW5 83 aa10.94□□□□□ -0.66
LIME1-204ENST00000476183 TSTD3H0UI37 97 aa10.93□□□□□ -0.66
LIME1-204ENST00000476183 IGHV6-1A0A0B4J1U7 121 aa10.91□□□□□ -0.66
LIME1-204ENST00000476183 BATFQ16520 125 aa10.91□□□□□ -0.66
LIME1-204ENST00000476183 LCE2DQ5TA82 110 aaPredicted RBP10.9□□□□□ -0.66
LIME1-204ENST00000476183 LORP23490 312 aaPredicted RBP10.89□□□□□ -0.67
LIME1-204ENST00000476183 KRTAP10-6P60371 365 aaPredicted RBP10.89□□□□□ -0.67
LIME1-204ENST00000476183 Q6ZQT0 140 aa10.88□□□□□ -0.67
LIME1-204ENST00000476183 JMJD7-PLA2G4BH0Y9G9 81 aa10.87□□□□□ -0.67
LIME1-204ENST00000476183 M0R2T5 61 aa10.87□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 92.1 ms