RNA–Protein interactions for RNA: ENST00000474851.1

LSAMP-203, Transcript of limbic system associated membrane protein, humanhuman

TSL 5

Gene LSAMP, Length 772 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSAMP-203ENST00000474851 LINC00308Q8TCZ7 52 aa4.48□□□□□ -1.69
LSAMP-203ENST00000474851 CAMK2N2Q96S95 79 aa4.48□□□□□ -1.69
LSAMP-203ENST00000474851 KRTAP9-7A8MTY7 169 aa4.47□□□□□ -1.69
LSAMP-203ENST00000474851 MT1HL1P0DM35 61 aa4.47□□□□□ -1.69
LSAMP-203ENST00000474851 NPC2P61916 151 aa4.47□□□□□ -1.69
LSAMP-203ENST00000474851 TNXBP22105 4242 aa4.47□□□□□ -1.69
LSAMP-203ENST00000474851 SMIM26A0A096LP01 95 aa4.46□□□□□ -1.7
LSAMP-203ENST00000474851 PRR3P79522 188 aaKnown RBP4.46□□□□□ -1.7
LSAMP-203ENST00000474851 KLKP1Q107X0 134 aa4.46□□□□□ -1.7
LSAMP-203ENST00000474851 UNQ6190/PRO20217Q6UXQ8 127 aa4.46□□□□□ -1.7
LSAMP-203ENST00000474851 C7orf33Q8WU49 177 aa4.46□□□□□ -1.7
LSAMP-203ENST00000474851 FAM218AQ96MZ4 157 aa4.46□□□□□ -1.7
LSAMP-203ENST00000474851 LINC00846Q9NV44 126 aa4.46□□□□□ -1.7
LSAMP-203ENST00000474851 PKIGQ9Y2B9 76 aa4.46□□□□□ -1.7
LSAMP-203ENST00000474851 FAM236DA0A1B0GTK5 79 aa4.45□□□□□ -1.7
LSAMP-203ENST00000474851 H7BZZ5 65 aa4.45□□□□□ -1.7
LSAMP-203ENST00000474851 TLX1NBP0CAT3 122 aa4.45□□□□□ -1.7
LSAMP-203ENST00000474851 FAM236CP0DP71 79 aa4.45□□□□□ -1.7
LSAMP-203ENST00000474851 C9orf116Q5BN46 136 aaPredicted RBP4.45□□□□□ -1.7
LSAMP-203ENST00000474851 S100A7L2Q5SY68 101 aa4.45□□□□□ -1.7
LSAMP-203ENST00000474851 SOSTDC1Q6X4U4 206 aa4.45□□□□□ -1.7
LSAMP-203ENST00000474851 KRTAP7-1Q8IUC3 87 aa4.45□□□□□ -1.7
LSAMP-203ENST00000474851 LINC00167Q96N53 147 aa4.45□□□□□ -1.7
LSAMP-203ENST00000474851 C6orf48Q9UBA6 75 aa4.45□□□□□ -1.7
LSAMP-203ENST00000474851 Q6ZRP5 223 aa4.44□□□□□ -1.7
LSAMP-203ENST00000474851 FP248Q71RG6 208 aaPredicted RBP4.44□□□□□ -1.7
LSAMP-203ENST00000474851 H0YGX0 51 aa4.43□□□□□ -1.7
LSAMP-203ENST00000474851 CCKP06307 115 aa4.43□□□□□ -1.7
LSAMP-203ENST00000474851 ZNF625Q96I27 306 aaPredicted RBP4.43□□□□□ -1.7
LSAMP-203ENST00000474851 CDKN2A-AS1Q9UH64 79 aa4.43□□□□□ -1.7
LSAMP-203ENST00000474851 TRAV7A0A075B6U4 112 aa4.42□□□□□ -1.7
LSAMP-203ENST00000474851 A0A087WVE0 104 aa4.42□□□□□ -1.7
LSAMP-203ENST00000474851 TRAV13-2A0A0B4J235 113 aa4.42□□□□□ -1.7
LSAMP-203ENST00000474851 IGKV3D-7A0A0C4DH55 119 aa4.42□□□□□ -1.7
LSAMP-203ENST00000474851 FAM168BA1KXE4 195 aa4.42□□□□□ -1.7
LSAMP-203ENST00000474851 DNAL4O96015 105 aa4.42□□□□□ -1.7
LSAMP-203ENST00000474851 ATP5EP56381 51 aaPredicted RBP4.42□□□□□ -1.7
LSAMP-203ENST00000474851 SEC61GP60059 68 aa4.42□□□□□ -1.7
LSAMP-203ENST00000474851 KRTAP5-3Q6L8H2 238 aa4.42□□□□□ -1.7
LSAMP-203ENST00000474851 PHF5AQ7RTV0 110 aaKnown RBP4.42□□□□□ -1.7
LSAMP-203ENST00000474851 KRTAP11-1Q8IUC1 163 aa4.42□□□□□ -1.7
LSAMP-203ENST00000474851 C6orf226Q5I0X4 101 aa4.41□□□□□ -1.7
LSAMP-203ENST00000474851 C9orf129Q5T035 196 aaKnown RBP4.41□□□□□ -1.7
LSAMP-203ENST00000474851 SERTAD4-AS1Q5TG53 156 aa4.41□□□□□ -1.7
LSAMP-203ENST00000474851 SPINK6Q6UWN8 80 aa4.41□□□□□ -1.7
LSAMP-203ENST00000474851 PSORS1C2Q9UIG4 136 aa4.41□□□□□ -1.7
LSAMP-203ENST00000474851 NDUFC1O43677 76 aa4.4□□□□□ -1.71
LSAMP-203ENST00000474851 KRTAP10-8P60410 259 aa4.4□□□□□ -1.71
LSAMP-203ENST00000474851 Q8IZM0 81 aa4.4□□□□□ -1.71
LSAMP-203ENST00000474851 IGKV2-28A0A075B6P5 120 aa4.39□□□□□ -1.71
LSAMP-203ENST00000474851 SMIM1B2RUZ4 78 aa4.39□□□□□ -1.71
LSAMP-203ENST00000474851 IGKV2D-28P01615 120 aa4.39□□□□□ -1.71
LSAMP-203ENST00000474851 LCE5AQ5TCM9 118 aa4.39□□□□□ -1.71
LSAMP-203ENST00000474851 TOMM7Q9P0U1 55 aa4.39□□□□□ -1.71
LSAMP-203ENST00000474851 V9GYY9 64 aa4.39□□□□□ -1.71
LSAMP-203ENST00000474851 JMJD7-PLA2G4BH0Y9G9 81 aa4.38□□□□□ -1.71
LSAMP-203ENST00000474851 ERC2-IT1O76042 136 aa4.38□□□□□ -1.71
LSAMP-203ENST00000474851 C1orf137Q5JT78 98 aa4.38□□□□□ -1.71
LSAMP-203ENST00000474851 C20orf197Q8N268 126 aa4.38□□□□□ -1.71
LSAMP-203ENST00000474851 LINC00337Q8N6G1 96 aa4.38□□□□□ -1.71
LSAMP-203ENST00000474851 C14orf132Q9NPU4 83 aa4.38□□□□□ -1.71
LSAMP-203ENST00000474851 UBR4Q5T4S7 5183 aa4.37□□□□□ -1.71
LSAMP-203ENST00000474851 IGLV7-43P04211 117 aa4.37□□□□□ -1.71
LSAMP-203ENST00000474851 C1orf195Q5TG92 126 aa4.37□□□□□ -1.71
LSAMP-203ENST00000474851 XAGE1AQ9HD64 81 aa4.37□□□□□ -1.71
LSAMP-203ENST00000474851 REG3GQ6UW15 175 aa4.36□□□□□ -1.71
LSAMP-203ENST00000474851 SMIM11BQ8TCY0 68 aa4.36□□□□□ -1.71
LSAMP-203ENST00000474851 COX7B2Q8TF08 81 aa4.36□□□□□ -1.71
LSAMP-203ENST00000474851 LRP2P98164 4655 aa4.36□□□□□ -1.71
LSAMP-203ENST00000474851 TRBV7-6A0A0J9YX20 115 aa4.35□□□□□ -1.71
LSAMP-203ENST00000474851 FAM19A1Q7Z5A9 133 aa4.35□□□□□ -1.71
LSAMP-203ENST00000474851 MIR7-3HGQ8N6C7 128 aa4.35□□□□□ -1.71
LSAMP-203ENST00000474851 TRAV23DV6A0A075B6W5 121 aa4.34□□□□□ -1.71
LSAMP-203ENST00000474851 LOC110117498A0A087WWA1 95 aa4.34□□□□□ -1.71
LSAMP-203ENST00000474851 TRBV7-4A0A0J9YYF1 115 aa4.34□□□□□ -1.71
LSAMP-203ENST00000474851 ORMDL1Q9P0S3 153 aa4.34□□□□□ -1.71
LSAMP-203ENST00000474851 LAMTOR3Q9UHA4 124 aa4.34□□□□□ -1.71
LSAMP-203ENST00000474851 NCR3O14931 201 aa4.33□□□□□ -1.72
LSAMP-203ENST00000474851 KRTAP1-4P0C5Y4 121 aa4.33□□□□□ -1.72
LSAMP-203ENST00000474851 CXCL6P80162 114 aa4.33□□□□□ -1.72
LSAMP-203ENST00000474851 PRR15Q8IV56 129 aa4.33□□□□□ -1.72
LSAMP-203ENST00000474851 DIRC1Q969H9 104 aa4.33□□□□□ -1.72
LSAMP-203ENST00000474851 SND1-IT1Q9HBX3 110 aa4.33□□□□□ -1.72
LSAMP-203ENST00000474851 IGLV5-37A0A075B6J1 123 aa4.32□□□□□ -1.72
LSAMP-203ENST00000474851 H0Y9J4 135 aa4.32□□□□□ -1.72
LSAMP-203ENST00000474851 TMEM256-PLSCR3K7ERE1 68 aa4.32□□□□□ -1.72
LSAMP-203ENST00000474851 ZNF861PO60384 105 aa4.32□□□□□ -1.72
LSAMP-203ENST00000474851 UBE2BP63146 152 aa4.32□□□□□ -1.72
LSAMP-203ENST00000474851 UBL5Q9BZL1 73 aa4.32□□□□□ -1.72
LSAMP-203ENST00000474851 F8WEM9 126 aa4.31□□□□□ -1.72
LSAMP-203ENST00000474851 Q6ZQT0 140 aa4.31□□□□□ -1.72
LSAMP-203ENST00000474851 MRPL55Q7Z7F7 128 aaKnown RBP4.31□□□□□ -1.72
LSAMP-203ENST00000474851 PRR26Q8N8Z3 221 aa4.31□□□□□ -1.72
LSAMP-203ENST00000474851 PDE6GP18545 87 aa4.3□□□□□ -1.72
LSAMP-203ENST00000474851 Q8NDZ9 215 aa4.3□□□□□ -1.72
LSAMP-203ENST00000474851 KRTAP9-3Q9BYQ3 159 aa4.3□□□□□ -1.72
LSAMP-203ENST00000474851 A0A0U1RQV1 116 aa4.29□□□□□ -1.72
LSAMP-203ENST00000474851 RPL37AP8A6NKH3 93 aa4.29□□□□□ -1.72
LSAMP-203ENST00000474851 VPREB1P12018 145 aa4.29□□□□□ -1.72
LSAMP-203ENST00000474851 LINC01547P58512 204 aaPredicted RBP4.29□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 71.9 ms