RNA–Protein interactions for RNA: ENST00000474025.1

SNRNP40-204, Transcript of small nuclear ribonucleoprotein U5 subunit 40, humanhuman

TSL 3

Gene SNRNP40, Length 581 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP40-204ENST00000474025 A0A0G2JQZ4 141 aa2.63□□□□□ -1.99
SNRNP40-204ENST00000474025 MT2AP02795 61 aa2.63□□□□□ -1.99
SNRNP40-204ENST00000474025 SCGB1A1P11684 91 aa2.63□□□□□ -1.99
SNRNP40-204ENST00000474025 NMUP48645 174 aa2.63□□□□□ -1.99
SNRNP40-204ENST00000474025 AKR1D1P51857 326 aa2.63□□□□□ -1.99
SNRNP40-204ENST00000474025 ELOF1P60002 83 aaKnown RBP2.63□□□□□ -1.99
SNRNP40-204ENST00000474025 RHEBQ15382 184 aa2.63□□□□□ -1.99
SNRNP40-204ENST00000474025 ADAMTSL4-AS1Q5T5F5 129 aa2.63□□□□□ -1.99
SNRNP40-204ENST00000474025 Q8N9P0 234 aaPredicted RBP2.63□□□□□ -1.99
SNRNP40-204ENST00000474025 CHCHD1Q96BP2 118 aaKnown RBP2.63□□□□□ -1.99
SNRNP40-204ENST00000474025 A0A0J9YXY3 114 aa2.62□□□□□ -1.99
SNRNP40-204ENST00000474025 TEX49A0A1B0GTD5 131 aa2.62□□□□□ -1.99
SNRNP40-204ENST00000474025 TSTD3H0UI37 97 aa2.62□□□□□ -1.99
SNRNP40-204ENST00000474025 LGALS3P17931 250 aaKnown RBP2.62□□□□□ -1.99
SNRNP40-204ENST00000474025 PLNP26678 52 aa2.62□□□□□ -1.99
SNRNP40-204ENST00000474025 DEFB105AQ8NG35 78 aa2.62□□□□□ -1.99
SNRNP40-204ENST00000474025 IGLV5-48A0A075B6I7 105 aa2.61□□□□□ -1.99
SNRNP40-204ENST00000474025 FAM240AA0A1B0GVK7 77 aa2.61□□□□□ -1.99
SNRNP40-204ENST00000474025 A0A1B0GWB2 263 aa2.61□□□□□ -1.99
SNRNP40-204ENST00000474025 MT1FP04733 61 aa2.61□□□□□ -1.99
SNRNP40-204ENST00000474025 COX7BP24311 80 aa2.61□□□□□ -1.99
SNRNP40-204ENST00000474025 HERVK_113P61574 105 aa2.61□□□□□ -1.99
SNRNP40-204ENST00000474025 C6orf99Q4VX62 202 aa2.61□□□□□ -1.99
SNRNP40-204ENST00000474025 C10orf91Q5T1B1 145 aa2.61□□□□□ -1.99
SNRNP40-204ENST00000474025 ATP11AUNQ6ZP68 121 aa2.61□□□□□ -1.99
SNRNP40-204ENST00000474025 OR13C6PQ8NH95 151 aa2.61□□□□□ -1.99
SNRNP40-204ENST00000474025 LITAFQ99732 161 aa2.61□□□□□ -1.99
SNRNP40-204ENST00000474025 SPANXDQ9BXN6 97 aa2.61□□□□□ -1.99
SNRNP40-204ENST00000474025 SPANXCQ9NY87 97 aa2.61□□□□□ -1.99
SNRNP40-204ENST00000474025 C20orf202A1L168 122 aa2.6□□□□□ -1.99
SNRNP40-204ENST00000474025 DPM2O94777 84 aa2.6□□□□□ -1.99
SNRNP40-204ENST00000474025 TCL1BO95988 128 aa2.6□□□□□ -1.99
SNRNP40-204ENST00000474025 LINC00308Q8TCZ7 52 aa2.6□□□□□ -1.99
SNRNP40-204ENST00000474025 OBSCN-AS1Q96MR7 158 aa2.6□□□□□ -1.99
SNRNP40-204ENST00000474025 FAM218AQ96MZ4 157 aa2.6□□□□□ -1.99
SNRNP40-204ENST00000474025 PMCHL2Q9BQD1 86 aa2.6□□□□□ -1.99
SNRNP40-204ENST00000474025 TRBV7-6A0A0J9YX20 115 aa2.59□□□□□ -1.99
SNRNP40-204ENST00000474025 LEPROTL1O95214 131 aa2.59□□□□□ -1.99
SNRNP40-204ENST00000474025 IGKCP01834 107 aa2.59□□□□□ -1.99
SNRNP40-204ENST00000474025 PCP2Q8IVA1 136 aa2.59□□□□□ -1.99
SNRNP40-204ENST00000474025 PRO0628Q9UI54 55 aa2.59□□□□□ -1.99
SNRNP40-204ENST00000474025 MUC12Q9UKN1 5478 aa2.58□□□□□ -2
SNRNP40-204ENST00000474025 E9PLD3 99 aa2.58□□□□□ -2
SNRNP40-204ENST00000474025 TIMM17BO60830 172 aa2.58□□□□□ -2
SNRNP40-204ENST00000474025 C4orf26Q17RF5 130 aa2.58□□□□□ -2
SNRNP40-204ENST00000474025 YPEL4Q96NS1 127 aa2.58□□□□□ -2
SNRNP40-204ENST00000474025 SIGMAR1Q99720 223 aa2.58□□□□□ -2
SNRNP40-204ENST00000474025 SERF1AO75920 110 aa2.57□□□□□ -2
SNRNP40-204ENST00000474025 KRTAP10-10P60014 251 aa2.57□□□□□ -2
SNRNP40-204ENST00000474025 KRTAP20-1Q3LI63 56 aa2.57□□□□□ -2
SNRNP40-204ENST00000474025 KRTAP19-6Q3LI70 58 aa2.57□□□□□ -2
SNRNP40-204ENST00000474025 HIST1H4GQ99525 98 aa2.57□□□□□ -2
SNRNP40-204ENST00000474025 HSPB8Q9UJY1 196 aa2.57□□□□□ -2
SNRNP40-204ENST00000474025 TRBV20-1A0A075B6N2 111 aa2.56□□□□□ -2
SNRNP40-204ENST00000474025 TRBV7-7A0A0K0K1E9 115 aa2.56□□□□□ -2
SNRNP40-204ENST00000474025 A8MUU9 505 aa2.56□□□□□ -2
SNRNP40-204ENST00000474025 FABP4P15090 132 aa2.56□□□□□ -2
SNRNP40-204ENST00000474025 C20orf166-AS1Q96NR2 134 aa2.56□□□□□ -2
SNRNP40-204ENST00000474025 BATFQ16520 125 aa2.55□□□□□ -2
SNRNP40-204ENST00000474025 IGFL1Q6UW32 110 aa2.55□□□□□ -2
SNRNP40-204ENST00000474025 CLEC2BQ92478 149 aa2.55□□□□□ -2
SNRNP40-204ENST00000474025 Q96NJ1 140 aa2.55□□□□□ -2
SNRNP40-204ENST00000474025 ZNF815PA8K554 130 aa2.54□□□□□ -2
SNRNP40-204ENST00000474025 F8WEM9 126 aa2.54□□□□□ -2
SNRNP40-204ENST00000474025 APOC3P02656 99 aa2.54□□□□□ -2
SNRNP40-204ENST00000474025 Q6JHZ5 121 aa2.54□□□□□ -2
SNRNP40-204ENST00000474025 NOTCH2NLQ7Z3S9 236 aa2.54□□□□□ -2
SNRNP40-204ENST00000474025 SVBPQ8N300 66 aa2.54□□□□□ -2
SNRNP40-204ENST00000474025 TTTY13Q9BZ97 58 aa2.54□□□□□ -2
SNRNP40-204ENST00000474025 NHP2Q9NX24 153 aaKnown RBP2.54□□□□□ -2
SNRNP40-204ENST00000474025 NEBP20929 6669 aa2.54□□□□□ -2
SNRNP40-204ENST00000474025 FAM236DA0A1B0GTK5 79 aa2.53□□□□□ -2
SNRNP40-204ENST00000474025 TRGC2P03986 189 aa2.53□□□□□ -2
SNRNP40-204ENST00000474025 FAM236CP0DP71 79 aa2.53□□□□□ -2
SNRNP40-204ENST00000474025 PSMB2P49721 201 aa2.53□□□□□ -2
SNRNP40-204ENST00000474025 Q6ZVH6 145 aa2.53□□□□□ -2
SNRNP40-204ENST00000474025 SMIM20Q8N5G0 67 aa2.53□□□□□ -2
SNRNP40-204ENST00000474025 TRAV13-2A0A0B4J235 113 aa2.52□□□□□ -2.01
SNRNP40-204ENST00000474025 KRTAP16-1A8MUX0 517 aa2.52□□□□□ -2.01
SNRNP40-204ENST00000474025 SYS1-DBNDD2H3BUS1 97 aa2.52□□□□□ -2.01
SNRNP40-204ENST00000474025 LST1O00453 97 aa2.52□□□□□ -2.01
SNRNP40-204ENST00000474025 IGKV2-30P06310 120 aa2.52□□□□□ -2.01
SNRNP40-204ENST00000474025 HRES1P13985 223 aa2.52□□□□□ -2.01
SNRNP40-204ENST00000474025 Q6ZQY7 126 aa2.52□□□□□ -2.01
SNRNP40-204ENST00000474025 SMIM11BQ8TCY0 68 aa2.52□□□□□ -2.01
SNRNP40-204ENST00000474025 PRAC1Q96KF2 57 aa2.52□□□□□ -2.01
SNRNP40-204ENST00000474025 MDN1Q9NU22 5596 aa2.51□□□□□ -2.01
SNRNP40-204ENST00000474025 IFITM1P13164 125 aa2.51□□□□□ -2.01
SNRNP40-204ENST00000474025 OCIAD2Q56VL3 154 aa2.51□□□□□ -2.01
SNRNP40-204ENST00000474025 LINC01545Q5VT33 79 aa2.51□□□□□ -2.01
SNRNP40-204ENST00000474025 LINC00575Q6W349 94 aa2.51□□□□□ -2.01
SNRNP40-204ENST00000474025 SCGB1D4Q6XE38 83 aa2.5□□□□□ -2.01
SNRNP40-204ENST00000474025 COPS9Q8WXC6 57 aa2.5□□□□□ -2.01
SNRNP40-204ENST00000474025 RBM12B-AS1Q9P1G2 102 aa2.5□□□□□ -2.01
SNRNP40-204ENST00000474025 hADV29S1A0JD25 119 aa2.49□□□□□ -2.01
SNRNP40-204ENST00000474025 H3BUT2 72 aa2.49□□□□□ -2.01
SNRNP40-204ENST00000474025 DSCR10P59022 87 aa2.49□□□□□ -2.01
SNRNP40-204ENST00000474025 PMAIP1Q13794 54 aa2.49□□□□□ -2.01
SNRNP40-204ENST00000474025 MUSTN1Q8IVN3 82 aa2.49□□□□□ -2.01
SNRNP40-204ENST00000474025 OCR1Q9BZK8 76 aa2.49□□□□□ -2.01
Retrieved 100 of 20,778 RNA–protein pairs in 14.4 ms