RNA–Protein interactions for RNA: ENST00000473421.1

TRAF4-209, Transcript of TNF receptor associated factor 4, humanhuman

TSL 3

Gene TRAF4, Length 585 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF4-209ENST00000473421 SPCS1Q9Y6A9 102 aa6.65□□□□□ -1.34
TRAF4-209ENST00000473421 H3BUT2 72 aa6.64□□□□□ -1.35
TRAF4-209ENST00000473421 ZNF73O43830 326 aaPredicted RBP6.64□□□□□ -1.35
TRAF4-209ENST00000473421 SPRR1BP22528 89 aa6.64□□□□□ -1.35
TRAF4-209ENST00000473421 RPL37P61927 97 aaKnown RBP6.64□□□□□ -1.35
TRAF4-209ENST00000473421 SPANXB1Q9NS25 103 aaPredicted RBP6.64□□□□□ -1.35
TRAF4-209ENST00000473421 SCGB1A1P11684 91 aa6.63□□□□□ -1.35
TRAF4-209ENST00000473421 NPC2P61916 151 aa6.63□□□□□ -1.35
TRAF4-209ENST00000473421 S100A7L2Q5SY68 101 aa6.63□□□□□ -1.35
TRAF4-209ENST00000473421 ADAMTSL4-AS1Q5T5F5 129 aa6.63□□□□□ -1.35
TRAF4-209ENST00000473421 LIMD2Q9BT23 127 aa6.63□□□□□ -1.35
TRAF4-209ENST00000473421 F8W1H4 67 aa6.62□□□□□ -1.35
TRAF4-209ENST00000473421 C1orf195Q5TG92 126 aa6.62□□□□□ -1.35
TRAF4-209ENST00000473421 LYRM7Q5U5X0 104 aa6.62□□□□□ -1.35
TRAF4-209ENST00000473421 PCP2Q8IVA1 136 aa6.62□□□□□ -1.35
TRAF4-209ENST00000473421 CEND1Q8N111 149 aa6.62□□□□□ -1.35
TRAF4-209ENST00000473421 FCGBPQ9Y6R7 5405 aaPredicted RBP6.62□□□□□ -1.35
TRAF4-209ENST00000473421 TMEM238LA0A1B0GVL6 79 aa6.61□□□□□ -1.35
TRAF4-209ENST00000473421 A0A1B0GWB2 263 aa6.61□□□□□ -1.35
TRAF4-209ENST00000473421 A6NJY4 79 aa6.61□□□□□ -1.35
TRAF4-209ENST00000473421 KRTAP9-8Q9BYQ0 159 aa6.61□□□□□ -1.35
TRAF4-209ENST00000473421 E9PLD3 99 aa6.6□□□□□ -1.35
TRAF4-209ENST00000473421 LEPROTO15243 131 aa6.6□□□□□ -1.35
TRAF4-209ENST00000473421 NDUFC2O95298 119 aa6.6□□□□□ -1.35
TRAF4-209ENST00000473421 Q1RN00 199 aa6.6□□□□□ -1.35
TRAF4-209ENST00000473421 J3QQQ9 107 aa6.59□□□□□ -1.35
TRAF4-209ENST00000473421 C21orf62-AS1Q17RA5 79 aa6.59□□□□□ -1.35
TRAF4-209ENST00000473421 HERVK_113P61574 105 aa6.58□□□□□ -1.36
TRAF4-209ENST00000473421 FXYD2P54710 66 aa6.57□□□□□ -1.36
TRAF4-209ENST00000473421 DEFB105AQ8NG35 78 aa6.57□□□□□ -1.36
TRAF4-209ENST00000473421 Q6Q795 121 aa6.56□□□□□ -1.36
TRAF4-209ENST00000473421 SMIM29Q86T20 159 aa6.56□□□□□ -1.36
TRAF4-209ENST00000473421 RAB37Q96AX2 223 aa6.56□□□□□ -1.36
TRAF4-209ENST00000473421 HIST1H4GQ99525 98 aa6.56□□□□□ -1.36
TRAF4-209ENST00000473421 NHP2Q9NX24 153 aaKnown RBP6.56□□□□□ -1.36
TRAF4-209ENST00000473421 LAMTOR3Q9UHA4 124 aa6.56□□□□□ -1.36
TRAF4-209ENST00000473421 LGALS3P17931 250 aaKnown RBP6.55□□□□□ -1.36
TRAF4-209ENST00000473421 CD164Q04900 197 aa6.55□□□□□ -1.36
TRAF4-209ENST00000473421 A0A0J9YXY3 114 aa6.54□□□□□ -1.36
TRAF4-209ENST00000473421 Q5XG85 94 aa6.54□□□□□ -1.36
TRAF4-209ENST00000473421 TTTY13Q9BZ97 58 aa6.54□□□□□ -1.36
TRAF4-209ENST00000473421 TRBV20-1A0A075B6N2 111 aa6.52□□□□□ -1.37
TRAF4-209ENST00000473421 OR13C6PQ8NH95 151 aa6.52□□□□□ -1.37
TRAF4-209ENST00000473421 SIGMAR1Q99720 223 aa6.52□□□□□ -1.37
TRAF4-209ENST00000473421 LITAFQ99732 161 aa6.52□□□□□ -1.37
TRAF4-209ENST00000473421 DHRS4-AS1Q9P1J3 65 aa6.52□□□□□ -1.37
TRAF4-209ENST00000473421 H3BMG7 143 aa6.51□□□□□ -1.37
TRAF4-209ENST00000473421 MTURNQ8N3F0 131 aa6.51□□□□□ -1.37
TRAF4-209ENST00000473421 ZNF815PA8K554 130 aa6.5□□□□□ -1.37
TRAF4-209ENST00000473421 K7ERJ3 54 aa6.5□□□□□ -1.37
TRAF4-209ENST00000473421 ELOF1P60002 83 aaKnown RBP6.5□□□□□ -1.37
TRAF4-209ENST00000473421 C6orf99Q4VX62 202 aa6.5□□□□□ -1.37
TRAF4-209ENST00000473421 SCGB1D4Q6XE38 83 aa6.5□□□□□ -1.37
TRAF4-209ENST00000473421 KRTAP19-1Q8IUB9 90 aa6.5□□□□□ -1.37
TRAF4-209ENST00000473421 LINC00308Q8TCZ7 52 aa6.5□□□□□ -1.37
TRAF4-209ENST00000473421 LCE2BO14633 110 aa6.49□□□□□ -1.37
TRAF4-209ENST00000473421 PRO0461Q9UI25 63 aa6.49□□□□□ -1.37
TRAF4-209ENST00000473421 TEX49A0A1B0GTD5 131 aa6.48□□□□□ -1.37
TRAF4-209ENST00000473421 COX7BP24311 80 aa6.48□□□□□ -1.37
TRAF4-209ENST00000473421 NAA38Q9BRA0 125 aaKnown RBP6.48□□□□□ -1.37
TRAF4-209ENST00000473421 A0A1B0GV72 72 aa6.46□□□□□ -1.38
TRAF4-209ENST00000473421 MT2AP02795 61 aa6.46□□□□□ -1.38
TRAF4-209ENST00000473421 SPANXCQ9NY87 97 aa6.46□□□□□ -1.38
TRAF4-209ENST00000473421 A0A0B4J2C4 111 aa6.45□□□□□ -1.38
TRAF4-209ENST00000473421 CFC1P0CG37 223 aa6.45□□□□□ -1.38
TRAF4-209ENST00000473421 PPDPFLQ8WWR9 84 aa6.45□□□□□ -1.38
TRAF4-209ENST00000473421 IGLV5-48A0A075B6I7 105 aa6.44□□□□□ -1.38
TRAF4-209ENST00000473421 ETDBQ3ZM63 59 aa6.44□□□□□ -1.38
TRAF4-209ENST00000473421 TEN1Q86WV5 123 aa6.44□□□□□ -1.38
TRAF4-209ENST00000473421 SPANXDQ9BXN6 97 aa6.44□□□□□ -1.38
TRAF4-209ENST00000473421 PRO1854Q9UHT4 67 aa6.44□□□□□ -1.38
TRAF4-209ENST00000473421 SYNE2Q8WXH0 6885 aaKnown RBP6.43□□□□□ -1.38
TRAF4-209ENST00000473421 MACF1Q9UPN3 7388 aaKnown RBP6.43□□□□□ -1.38
TRAF4-209ENST00000473421 TIMM17BO60830 172 aa6.43□□□□□ -1.38
TRAF4-209ENST00000473421 MT1FP04733 61 aa6.43□□□□□ -1.38
TRAF4-209ENST00000473421 OBSCN-AS1Q96MR7 158 aa6.43□□□□□ -1.38
TRAF4-209ENST00000473421 KRTAP9-3Q9BYQ3 159 aa6.41□□□□□ -1.38
TRAF4-209ENST00000473421 PSMB2P49721 201 aa6.4□□□□□ -1.38
TRAF4-209ENST00000473421 ATP11AUNQ6ZP68 121 aa6.4□□□□□ -1.38
TRAF4-209ENST00000473421 Q75L30 129 aa6.4□□□□□ -1.38
TRAF4-209ENST00000473421 COPS9Q8WXC6 57 aa6.4□□□□□ -1.38
TRAF4-209ENST00000473421 ATXN8Q156A1 80 aa6.39□□□□□ -1.39
TRAF4-209ENST00000473421 TCL1BO95988 128 aa6.38□□□□□ -1.39
TRAF4-209ENST00000473421 SCGB1C2P0DMR2 95 aa6.38□□□□□ -1.39
TRAF4-209ENST00000473421 IFITM1P13164 125 aa6.38□□□□□ -1.39
TRAF4-209ENST00000473421 COX6CP09669 75 aa6.37□□□□□ -1.39
TRAF4-209ENST00000473421 SMCPP49901 116 aaPredicted RBP6.37□□□□□ -1.39
TRAF4-209ENST00000473421 TRBV7-6A0A0J9YX20 115 aa6.36□□□□□ -1.39
TRAF4-209ENST00000473421 A4D1N5 150 aa6.35□□□□□ -1.39
TRAF4-209ENST00000473421 H3BT86 120 aa6.35□□□□□ -1.39
TRAF4-209ENST00000473421 ANKRD29Q8N6D5 301 aa6.34□□□□□ -1.39
TRAF4-209ENST00000473421 TRBV7-7A0A0K0K1E9 115 aa6.33□□□□□ -1.4
TRAF4-209ENST00000473421 FAM240AA0A1B0GVK7 77 aa6.33□□□□□ -1.4
TRAF4-209ENST00000473421 IGFL1Q6UW32 110 aa6.33□□□□□ -1.4
TRAF4-209ENST00000473421 Q96NJ1 140 aa6.33□□□□□ -1.4
TRAF4-209ENST00000473421 KRTAP16-1A8MUX0 517 aa6.32□□□□□ -1.4
TRAF4-209ENST00000473421 MUSTN1Q8IVN3 82 aa6.32□□□□□ -1.4
TRAF4-209ENST00000473421 C9JAW5 83 aa6.31□□□□□ -1.4
TRAF4-209ENST00000473421 SMIM11BQ8TCY0 68 aa6.31□□□□□ -1.4
TRAF4-209ENST00000473421 ACYP1P07311 99 aa6.3□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 721 ms