RNA–Protein interactions for RNA: ENST00000472888.1

RFXAP-202, Transcript of regulatory factor X associated protein, humanhuman

TSL 3

Gene RFXAP, Length 534 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFXAP-202ENST00000472888 LRP2P98164 4655 aa0.08□□□□□ -2.4
RFXAP-202ENST00000472888 DDX60LQ5H9U9 1706 aaKnown RBP0.07□□□□□ -2.4
RFXAP-202ENST00000472888 ACANP16112 2415 aa0.07□□□□□ -2.4
RFXAP-202ENST00000472888 THOC2Q8NI27 1593 aaKnown RBP0.07□□□□□ -2.4
RFXAP-202ENST00000472888 SSPOA2VEC9 5147 aa0.07□□□□□ -2.4
RFXAP-202ENST00000472888 MYO5CQ9NQX4 1742 aa0.07□□□□□ -2.4
RFXAP-202ENST00000472888 ADAMTS12P58397 1594 aa0.06□□□□□ -2.4
RFXAP-202ENST00000472888 TENM2Q9NT68 2774 aa0.06□□□□□ -2.4
RFXAP-202ENST00000472888 PCNX1Q96RV3 2341 aa0.05□□□□□ -2.4
RFXAP-202ENST00000472888 LRRIQ1Q96JM4 1722 aa0.05□□□□□ -2.4
RFXAP-202ENST00000472888 GNG13Q9P2W3 67 aa0.05□□□□□ -2.4
RFXAP-202ENST00000472888 HILPDAQ9Y5L2 63 aa0.05□□□□□ -2.4
RFXAP-202ENST00000472888 HECTD1Q9ULT8 2610 aa0.05□□□□□ -2.4
RFXAP-202ENST00000472888 DIP2AQ14689 1571 aa0.04□□□□□ -2.4
RFXAP-202ENST00000472888 ETDCA0A1B0GVM5 59 aa0.04□□□□□ -2.4
RFXAP-202ENST00000472888 IQGAP3Q86VI3 1631 aa0.04□□□□□ -2.4
RFXAP-202ENST00000472888 CDC42BPGQ6DT37 1551 aa0.03□□□□□ -2.4
RFXAP-202ENST00000472888 HECTD4Q9Y4D8 3996 aa0.03□□□□□ -2.4
RFXAP-202ENST00000472888 ZANQ9Y493 2812 aa0.03□□□□□ -2.41
RFXAP-202ENST00000472888 COL6A3P12111 3177 aa0.02□□□□□ -2.41
RFXAP-202ENST00000472888 DSPP15924 2871 aaKnown RBP0.02□□□□□ -2.41
RFXAP-202ENST00000472888 CRIP1P50238 77 aa0.02□□□□□ -2.41
RFXAP-202ENST00000472888 LRP1BQ9NZR2 4599 aa0.01□□□□□ -2.41
RFXAP-202ENST00000472888 IAPPP10997 89 aa0.01□□□□□ -2.41
RFXAP-202ENST00000472888 DEFB114Q30KQ6 69 aa0.01□□□□□ -2.41
RFXAP-202ENST00000472888 PRRC2CQ9Y520 2896 aaKnown RBP0.01□□□□□ -2.41
RFXAP-202ENST00000472888 ASXL1Q8IXJ9 1541 aa0.01□□□□□ -2.41
RFXAP-202ENST00000472888 DEFB130BP0DP73 79 aa0□□□□□ -2.41
RFXAP-202ENST00000472888 DEFB130AP0DP74 79 aa0□□□□□ -2.41
RFXAP-202ENST00000472888 ITSN1Q15811 1721 aa0□□□□□ -2.41
RFXAP-202ENST00000472888 MAP1AP78559 2803 aaPredicted RBP-0□□□□□ -2.41
RFXAP-202ENST00000472888 TJP1Q07157 1748 aa-0.01□□□□□ -2.41
RFXAP-202ENST00000472888 RNF17Q9BXT8 1623 aaKnown RBP-0.02□□□□□ -2.41
RFXAP-202ENST00000472888 CREBBPQ92793 2442 aa-0.02□□□□□ -2.41
RFXAP-202ENST00000472888 PKD1P98161 4303 aa-0.02□□□□□ -2.41
RFXAP-202ENST00000472888 STAB1Q9NY15 2570 aa-0.02□□□□□ -2.41
RFXAP-202ENST00000472888 NHSQ6T4R5 1651 aa-0.03□□□□□ -2.41
RFXAP-202ENST00000472888 PARP4Q9UKK3 1724 aaKnown RBP-0.04□□□□□ -2.42
RFXAP-202ENST00000472888 PKHD1P08F94 4074 aa-0.04□□□□□ -2.42
RFXAP-202ENST00000472888 INO80Q9ULG1 1556 aaPredicted RBP-0.04□□□□□ -2.42
RFXAP-202ENST00000472888 TNRC18O15417 2968 aaPredicted RBP-0.04□□□□□ -2.42
RFXAP-202ENST00000472888 ZC3H13Q5T200 1668 aaKnown RBP-0.05□□□□□ -2.42
RFXAP-202ENST00000472888 ABCA9Q8IUA7 1624 aa-0.05□□□□□ -2.42
RFXAP-202ENST00000472888 SPRR2AP35326 72 aa-0.05□□□□□ -2.42
RFXAP-202ENST00000472888 KIAA0586Q9BVV6 1533 aa-0.06□□□□□ -2.42
RFXAP-202ENST00000472888 PRLHP81277 87 aa-0.06□□□□□ -2.42
RFXAP-202ENST00000472888 NF1P21359 2839 aa-0.06□□□□□ -2.42
RFXAP-202ENST00000472888 NRAPQ86VF7 1730 aa-0.07□□□□□ -2.42
RFXAP-202ENST00000472888 NBEAL1Q6ZS30 2694 aa-0.07□□□□□ -2.42
RFXAP-202ENST00000472888 EFCAB5A4FU69 1503 aa-0.07□□□□□ -2.42
RFXAP-202ENST00000472888 NBASA2RRP1 2371 aa-0.07□□□□□ -2.42
RFXAP-202ENST00000472888 A0A087WWC5 75 aa-0.07□□□□□ -2.42
RFXAP-202ENST00000472888 STAB2Q8WWQ8 2551 aa-0.08□□□□□ -2.42
RFXAP-202ENST00000472888 C9orf92A6NGG3 77 aa-0.08□□□□□ -2.42
RFXAP-202ENST00000472888 LINC01549A6NIU2 74 aa-0.08□□□□□ -2.42
RFXAP-202ENST00000472888 SETD2Q9BYW2 2564 aaPredicted RBP-0.09□□□□□ -2.42
RFXAP-202ENST00000472888 BPTFQ12830 3046 aa-0.1□□□□□ -2.42
RFXAP-202ENST00000472888 K7EMI3 77 aa-0.1□□□□□ -2.43
RFXAP-202ENST00000472888 MINOS1Q5TGZ0 78 aa-0.1□□□□□ -2.43
RFXAP-202ENST00000472888 ABCC6O95255 1503 aa-0.1□□□□□ -2.43
RFXAP-202ENST00000472888 PDZD2O15018 2839 aa-0.1□□□□□ -2.43
RFXAP-202ENST00000472888 DNMBPQ6XZF7 1577 aa-0.11□□□□□ -2.43
RFXAP-202ENST00000472888 SPTBN4Q9H254 2564 aa-0.11□□□□□ -2.43
RFXAP-202ENST00000472888 KRTAP6-2Q3LI66 62 aa-0.12□□□□□ -2.43
RFXAP-202ENST00000472888 MUC2Q02817 5179 aa-0.12□□□□□ -2.43
RFXAP-202ENST00000472888 TGP01266 2768 aa-0.12□□□□□ -2.43
RFXAP-202ENST00000472888 SMIM31A0A1B0GVY4 71 aa-0.13□□□□□ -2.43
RFXAP-202ENST00000472888 H3BNG1 76 aa-0.13□□□□□ -2.43
RFXAP-202ENST00000472888 WT1-ASQ06250 92 aa-0.13□□□□□ -2.43
RFXAP-202ENST00000472888 KRTAP6-1Q3LI64 71 aa-0.13□□□□□ -2.43
RFXAP-202ENST00000472888 LYSTQ99698 3801 aa-0.13□□□□□ -2.43
RFXAP-202ENST00000472888 S4R3F8 94 aa-0.13□□□□□ -2.43
RFXAP-202ENST00000472888 FLGP20930 4061 aaPredicted RBP-0.13□□□□□ -2.43
RFXAP-202ENST00000472888 DSTQ03001 7570 aaKnown RBP-0.14□□□□□ -2.43
RFXAP-202ENST00000472888 NCBP2-AS2Q69YL0 99 aa-0.14□□□□□ -2.43
RFXAP-202ENST00000472888 MROH1Q8NDA8 1641 aa-0.14□□□□□ -2.43
RFXAP-202ENST00000472888 MADDQ8WXG6 1647 aa-0.14□□□□□ -2.43
RFXAP-202ENST00000472888 SRRM2Q9UQ35 2752 aaKnown RBP-0.14□□□□□ -2.43
RFXAP-202ENST00000472888 C3P01024 1663 aa-0.14□□□□□ -2.43
RFXAP-202ENST00000472888 DEFB106AQ8N104 65 aa-0.15□□□□□ -2.43
RFXAP-202ENST00000472888 MUC12Q9UKN1 5478 aa-0.15□□□□□ -2.43
RFXAP-202ENST00000472888 DNAH9Q9NYC9 4486 aa-0.15□□□□□ -2.43
RFXAP-202ENST00000472888 FAT1Q14517 4588 aa-0.16□□□□□ -2.44
RFXAP-202ENST00000472888 SONP18583 2426 aaKnown RBP-0.16□□□□□ -2.44
RFXAP-202ENST00000472888 SVEP1Q4LDE5 3571 aa-0.16□□□□□ -2.44
RFXAP-202ENST00000472888 ZZEF1O43149 2961 aa-0.17□□□□□ -2.44
RFXAP-202ENST00000472888 SPRR2EP22531 72 aa-0.17□□□□□ -2.44
RFXAP-202ENST00000472888 RPS27P42677 84 aaKnown RBP-0.17□□□□□ -2.44
RFXAP-202ENST00000472888 SERF2P84101 59 aa-0.17□□□□□ -2.44
RFXAP-202ENST00000472888 RPS27LQ71UM5 84 aaKnown RBP-0.17□□□□□ -2.44
RFXAP-202ENST00000472888 S100ZQ8WXG8 99 aa-0.17□□□□□ -2.44
RFXAP-202ENST00000472888 C6orf48Q9UBA6 75 aa-0.17□□□□□ -2.44
RFXAP-202ENST00000472888 TIMM8BQ9Y5J9 83 aaPredicted RBP-0.18□□□□□ -2.44
RFXAP-202ENST00000472888 EPG5Q9HCE0 2579 aa-0.18□□□□□ -2.44
RFXAP-202ENST00000472888 SPG11Q96JI7 2443 aa-0.18□□□□□ -2.44
RFXAP-202ENST00000472888 ANKRD11Q6UB99 2663 aaPredicted RBP-0.19□□□□□ -2.44
RFXAP-202ENST00000472888 KMT2CQ8NEZ4 4911 aaKnown RBP-0.19□□□□□ -2.44
RFXAP-202ENST00000472888 PKD1L2Q7Z442 2459 aa-0.19□□□□□ -2.44
RFXAP-202ENST00000472888 CEP290O15078 2479 aa-0.2□□□□□ -2.44
RFXAP-202ENST00000472888 HIVEP1P15822 2718 aa-0.2□□□□□ -2.44
Retrieved 100 of 20,778 RNA–protein pairs in 49.5 ms