RNA–Protein interactions for RNA: ENST00000472155.5

UBXN11-213, Transcript of UBX domain protein 11, humanhuman

TSL 1 (best)

Gene UBXN11, Length 2,646 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBXN11-213ENST00000472155 RPS28P62857 69 aaKnown RBP9.37□□□□□ -0.91
UBXN11-213ENST00000472155 IGKV4-1P06312 121 aa9.37□□□□□ -0.91
UBXN11-213ENST00000472155 LINC00476Q8WZB0 136 aa9.37□□□□□ -0.91
UBXN11-213ENST00000472155 DNAH6Q9C0G6 4158 aa9.36□□□□□ -0.91
UBXN11-213ENST00000472155 TMEM258P61165 79 aa9.36□□□□□ -0.91
UBXN11-213ENST00000472155 EPM2AB3EWF7 344 aa9.35□□□□□ -0.91
UBXN11-213ENST00000472155 C20orf197Q8N268 126 aa9.35□□□□□ -0.91
UBXN11-213ENST00000472155 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP9.35□□□□□ -0.91
UBXN11-213ENST00000472155 C14orf177Q52M58 125 aa9.35□□□□□ -0.91
UBXN11-213ENST00000472155 Q8NBF4 154 aa9.35□□□□□ -0.91
UBXN11-213ENST00000472155 C4orf26Q17RF5 130 aa9.34□□□□□ -0.91
UBXN11-213ENST00000472155 IGFL1Q6UW32 110 aa9.33□□□□□ -0.92
UBXN11-213ENST00000472155 DEFB116Q30KQ4 102 aa9.32□□□□□ -0.92
UBXN11-213ENST00000472155 SPRR4Q96PI1 79 aa9.3□□□□□ -0.92
UBXN11-213ENST00000472155 SNURFQ9Y675 71 aa9.3□□□□□ -0.92
UBXN11-213ENST00000472155 HYDINQ4G0P3 5121 aa9.29□□□□□ -0.92
UBXN11-213ENST00000472155 HRCT1Q6UXD1 115 aa9.29□□□□□ -0.92
UBXN11-213ENST00000472155 TRAV7A0A075B6U4 112 aa9.29□□□□□ -0.92
UBXN11-213ENST00000472155 A0A087WTM6 91 aa9.28□□□□□ -0.92
UBXN11-213ENST00000472155 DSCR10P59022 87 aa9.27□□□□□ -0.93
UBXN11-213ENST00000472155 Q5XG85 94 aa9.27□□□□□ -0.93
UBXN11-213ENST00000472155 F8WEM9 126 aa9.27□□□□□ -0.93
UBXN11-213ENST00000472155 UBE2AP49459 152 aa9.27□□□□□ -0.93
UBXN11-213ENST00000472155 DNAH5Q8TE73 4624 aa9.26□□□□□ -0.93
UBXN11-213ENST00000472155 DNAH11Q96DT5 4516 aa9.25□□□□□ -0.93
UBXN11-213ENST00000472155 K7EQZ3 153 aa9.25□□□□□ -0.93
UBXN11-213ENST00000472155 SPACA4Q8TDM5 124 aa9.25□□□□□ -0.93
UBXN11-213ENST00000472155 A0A087WSZ3 146 aa9.25□□□□□ -0.93
UBXN11-213ENST00000472155 Q6ZR54 194 aa9.22□□□□□ -0.93
UBXN11-213ENST00000472155 KRTAP13-1Q8IUC0 172 aa9.22□□□□□ -0.93
UBXN11-213ENST00000472155 RTL8CO15255 209 aa9.21□□□□□ -0.93
UBXN11-213ENST00000472155 BCE1O60756 84 aa9.21□□□□□ -0.94
UBXN11-213ENST00000472155 IGLV8-61A0A075B6I0 122 aa9.2□□□□□ -0.94
UBXN11-213ENST00000472155 H7BZZ5 65 aa9.2□□□□□ -0.94
UBXN11-213ENST00000472155 H0Y9J4 135 aa9.2□□□□□ -0.94
UBXN11-213ENST00000472155 RPL37AP61513 92 aaKnown RBP9.2□□□□□ -0.94
UBXN11-213ENST00000472155 OCR1Q9BZK8 76 aa9.2□□□□□ -0.94
UBXN11-213ENST00000472155 LINC00474Q9P2X8 69 aa9.2□□□□□ -0.94
UBXN11-213ENST00000472155 ALMS1Q8TCU4 4167 aa9.19□□□□□ -0.94
UBXN11-213ENST00000472155 FAM30AQ9NZY2 134 aa9.19□□□□□ -0.94
UBXN11-213ENST00000472155 A0A1B0GW54 56 aa9.18□□□□□ -0.94
UBXN11-213ENST00000472155 FAM236DA0A1B0GTK5 79 aa9.17□□□□□ -0.94
UBXN11-213ENST00000472155 FAM236CP0DP71 79 aa9.17□□□□□ -0.94
UBXN11-213ENST00000472155 SPRR1BP22528 89 aa9.17□□□□□ -0.94
UBXN11-213ENST00000472155 ANAPC11Q9NYG5 84 aa9.17□□□□□ -0.94
UBXN11-213ENST00000472155 LY6G6CO95867 125 aa9.17□□□□□ -0.94
UBXN11-213ENST00000472155 KLKP1Q107X0 134 aa9.17□□□□□ -0.94
UBXN11-213ENST00000472155 IGLV9-49A0A0B4J1Y8 123 aa9.15□□□□□ -0.95
UBXN11-213ENST00000472155 PSORS1C2Q9UIG4 136 aa9.15□□□□□ -0.95
UBXN11-213ENST00000472155 FAT2Q9NYQ8 4349 aa9.15□□□□□ -0.95
UBXN11-213ENST00000472155 TMEM254Q8TBM7 123 aa9.14□□□□□ -0.95
UBXN11-213ENST00000472155 PKD1P98161 4303 aa9.13□□□□□ -0.95
UBXN11-213ENST00000472155 LRP1BQ9NZR2 4599 aa9.12□□□□□ -0.95
UBXN11-213ENST00000472155 IGLV5-52A0A0A0MRZ9 124 aa9.11□□□□□ -0.95
UBXN11-213ENST00000472155 C1orf134Q5TEV5 83 aa9.11□□□□□ -0.95
UBXN11-213ENST00000472155 WFDC13Q8IUB5 93 aa9.11□□□□□ -0.95
UBXN11-213ENST00000472155 PKIGQ9Y2B9 76 aa9.1□□□□□ -0.95
UBXN11-213ENST00000472155 LINC00336Q6ZUF6 198 aa9.08□□□□□ -0.96
UBXN11-213ENST00000472155 SERP1Q9Y6X1 66 aa9.08□□□□□ -0.96
UBXN11-213ENST00000472155 KRTAP10-2P60368 255 aa9.08□□□□□ -0.96
UBXN11-213ENST00000472155 PLAC8Q9NZF1 115 aa9.08□□□□□ -0.96
UBXN11-213ENST00000472155 A0A0U1RQV1 116 aa9.07□□□□□ -0.96
UBXN11-213ENST00000472155 HCG22E2RYF7 251 aa9.07□□□□□ -0.96
UBXN11-213ENST00000472155 LINC00472Q9H8W2 130 aa9.06□□□□□ -0.96
UBXN11-213ENST00000472155 FP248Q71RG6 208 aaPredicted RBP9.04□□□□□ -0.96
UBXN11-213ENST00000472155 PKHD1P08F94 4074 aa9.03□□□□□ -0.96
UBXN11-213ENST00000472155 WWC2-AS2Q96NR7 200 aa9.03□□□□□ -0.96
UBXN11-213ENST00000472155 MOBPQ13875 183 aa9.02□□□□□ -0.96
UBXN11-213ENST00000472155 LINC00483Q53H64 154 aa9.01□□□□□ -0.97
UBXN11-213ENST00000472155 ZNF861PO60384 105 aa9.01□□□□□ -0.97
UBXN11-213ENST00000472155 VPS13BQ7Z7G8 4022 aa9□□□□□ -0.97
UBXN11-213ENST00000472155 PRR15Q8IV56 129 aa9□□□□□ -0.97
UBXN11-213ENST00000472155 Q96NJ1 140 aa9□□□□□ -0.97
UBXN11-213ENST00000472155 KRTAP29-1A8MX34 341 aaPredicted RBP8.99□□□□□ -0.97
UBXN11-213ENST00000472155 LCE6AA0A183 80 aa8.99□□□□□ -0.97
UBXN11-213ENST00000472155 SACSQ9NZJ4 4579 aa8.98□□□□□ -0.97
UBXN11-213ENST00000472155 CIRBP-AS1Q8TBR5 109 aa8.98□□□□□ -0.97
UBXN11-213ENST00000472155 PRO0628Q9UI54 55 aa8.98□□□□□ -0.97
UBXN11-213ENST00000472155 SMIM26A0A096LP01 95 aa8.98□□□□□ -0.97
UBXN11-213ENST00000472155 A8MWP4 228 aa8.97□□□□□ -0.97
UBXN11-213ENST00000472155 CASC2Q6XLA1 102 aa8.95□□□□□ -0.98
UBXN11-213ENST00000472155 NDUFC1O43677 76 aa8.95□□□□□ -0.98
UBXN11-213ENST00000472155 IGLV7-43P04211 117 aa8.94□□□□□ -0.98
UBXN11-213ENST00000472155 ZCCHC13Q8WW36 166 aaKnown RBP8.94□□□□□ -0.98
UBXN11-213ENST00000472155 KRTAP10-1P60331 282 aa8.93□□□□□ -0.98
UBXN11-213ENST00000472155 FAM229BQ4G0N7 80 aa8.93□□□□□ -0.98
UBXN11-213ENST00000472155 MMP24-AS1A0A0U1RRL7 71 aa8.92□□□□□ -0.98
UBXN11-213ENST00000472155 MPLKIPQ8TAP9 179 aa8.91□□□□□ -0.98
UBXN11-213ENST00000472155 ZNF706Q9Y5V0 76 aaPredicted RBP8.91□□□□□ -0.98
UBXN11-213ENST00000472155 PRR4Q16378 134 aa8.9□□□□□ -0.98
UBXN11-213ENST00000472155 A0A087X002 238 aa8.89□□□□□ -0.99
UBXN11-213ENST00000472155 NOTCH2NLQ7Z3S9 236 aa8.89□□□□□ -0.99
UBXN11-213ENST00000472155 BRK1Q8WUW1 75 aa8.89□□□□□ -0.99
UBXN11-213ENST00000472155 LINC00208Q96KT6 92 aa8.87□□□□□ -0.99
UBXN11-213ENST00000472155 IGHV6-1A0A0B4J1U7 121 aa8.86□□□□□ -0.99
UBXN11-213ENST00000472155 hDV103S1A0JD37 113 aa8.84□□□□□ -0.99
UBXN11-213ENST00000472155 SPINK6Q6UWN8 80 aa8.84□□□□□ -0.99
UBXN11-213ENST00000472155 H0Y9P7 68 aa8.84□□□□□ -1
UBXN11-213ENST00000472155 ATP5EP56381 51 aaPredicted RBP8.84□□□□□ -1
UBXN11-213ENST00000472155 NDUFB1O75438 58 aa8.83□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 62.1 ms