RNA–Protein interactions for RNA: ENST00000472096.1

CALD1-215, Transcript of caldesmon 1, humanhuman

TSL 2

Gene CALD1, Length 651 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CALD1-215ENST00000472096 SPATA45Q537H7 98 aa8.54□□□□□ -1.04
CALD1-215ENST00000472096 HIST1H4GQ99525 98 aa8.54□□□□□ -1.04
CALD1-215ENST00000472096 LAMTOR3Q9UHA4 124 aa8.54□□□□□ -1.04
CALD1-215ENST00000472096 TAL2Q16559 108 aa8.53□□□□□ -1.04
CALD1-215ENST00000472096 VAMP8Q9BV40 100 aa8.53□□□□□ -1.04
CALD1-215ENST00000472096 TEX49A0A1B0GTD5 131 aa8.52□□□□□ -1.05
CALD1-215ENST00000472096 Q8N377 158 aa8.52□□□□□ -1.05
CALD1-215ENST00000472096 DEFB105AQ8NG35 78 aa8.52□□□□□ -1.05
CALD1-215ENST00000472096 C14orf144Q96I85 54 aa8.52□□□□□ -1.05
CALD1-215ENST00000472096 C12orf57Q99622 126 aa8.52□□□□□ -1.05
CALD1-215ENST00000472096 NHP2Q9NX24 153 aaKnown RBP8.52□□□□□ -1.05
CALD1-215ENST00000472096 IGLV5-48A0A075B6I7 105 aa8.51□□□□□ -1.05
CALD1-215ENST00000472096 LINC01547P58512 204 aaPredicted RBP8.51□□□□□ -1.05
CALD1-215ENST00000472096 Q1RN00 199 aa8.51□□□□□ -1.05
CALD1-215ENST00000472096 HIGD1BQ9P298 99 aa8.5□□□□□ -1.05
CALD1-215ENST00000472096 SLC25A20O43772 301 aa8.48□□□□□ -1.05
CALD1-215ENST00000472096 VAMP3Q15836 100 aa8.48□□□□□ -1.05
CALD1-215ENST00000472096 C2orf91Q6ZV80 131 aa8.48□□□□□ -1.05
CALD1-215ENST00000472096 SMIM29Q86T20 159 aa8.48□□□□□ -1.05
CALD1-215ENST00000472096 MUC17Q685J3 4493 aa8.46□□□□□ -1.05
CALD1-215ENST00000472096 LINC00575Q6W349 94 aa8.46□□□□□ -1.06
CALD1-215ENST00000472096 KRTAP13-3Q3SY46 172 aa8.45□□□□□ -1.06
CALD1-215ENST00000472096 PYY3Q5JQD4 70 aa8.44□□□□□ -1.06
CALD1-215ENST00000472096 HRCT1Q6UXD1 115 aa8.44□□□□□ -1.06
CALD1-215ENST00000472096 LIMD2Q9BT23 127 aa8.44□□□□□ -1.06
CALD1-215ENST00000472096 PRO1933Q9H354 126 aa8.44□□□□□ -1.06
CALD1-215ENST00000472096 A0A0B4J2C4 111 aa8.43□□□□□ -1.06
CALD1-215ENST00000472096 hADV29S1A0JD25 119 aa8.43□□□□□ -1.06
CALD1-215ENST00000472096 CFC1BP0CG36 223 aa8.43□□□□□ -1.06
CALD1-215ENST00000472096 CFC1P0CG37 223 aa8.43□□□□□ -1.06
CALD1-215ENST00000472096 CD164Q04900 197 aa8.43□□□□□ -1.06
CALD1-215ENST00000472096 BVES-AS1Q5T3Y7 98 aa8.42□□□□□ -1.06
CALD1-215ENST00000472096 Q6ZQY7 126 aa8.42□□□□□ -1.06
CALD1-215ENST00000472096 RAB37Q96AX2 223 aa8.42□□□□□ -1.06
CALD1-215ENST00000472096 H7C2G1 150 aa8.41□□□□□ -1.06
CALD1-215ENST00000472096 CEND1Q8N111 149 aa8.4□□□□□ -1.06
CALD1-215ENST00000472096 LCE5AQ5TCM9 118 aa8.39□□□□□ -1.07
CALD1-215ENST00000472096 A0A0G2JQZ4 141 aa8.38□□□□□ -1.07
CALD1-215ENST00000472096 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP8.38□□□□□ -1.07
CALD1-215ENST00000472096 F8WEM9 126 aa8.37□□□□□ -1.07
CALD1-215ENST00000472096 FXYD2P54710 66 aa8.37□□□□□ -1.07
CALD1-215ENST00000472096 MUC2Q02817 5179 aa8.37□□□□□ -1.07
CALD1-215ENST00000472096 Q5XG85 94 aa8.35□□□□□ -1.07
CALD1-215ENST00000472096 PPDPFLQ8WWR9 84 aa8.34□□□□□ -1.07
CALD1-215ENST00000472096 PRO1854Q9UHT4 67 aa8.34□□□□□ -1.07
CALD1-215ENST00000472096 IGLV8-61A0A075B6I0 122 aa8.33□□□□□ -1.08
CALD1-215ENST00000472096 HSD52Q0P140 79 aa8.33□□□□□ -1.08
CALD1-215ENST00000472096 H0YGX0 51 aa8.32□□□□□ -1.08
CALD1-215ENST00000472096 FAM218AQ96MZ4 157 aa8.32□□□□□ -1.08
CALD1-215ENST00000472096 KRTAP4-7Q9BYR0 210 aa8.32□□□□□ -1.08
CALD1-215ENST00000472096 ASB16-AS1Q495Z4 193 aa8.31□□□□□ -1.08
CALD1-215ENST00000472096 Q6JHZ5 121 aa8.31□□□□□ -1.08
CALD1-215ENST00000472096 A0A0U1RQV1 116 aa8.3□□□□□ -1.08
CALD1-215ENST00000472096 IGFL1Q6UW32 110 aa8.3□□□□□ -1.08
CALD1-215ENST00000472096 CLEC2BQ92478 149 aa8.3□□□□□ -1.08
CALD1-215ENST00000472096 SNCGO76070 127 aa8.29□□□□□ -1.08
CALD1-215ENST00000472096 KRTAP15-1Q3LI76 137 aa8.29□□□□□ -1.08
CALD1-215ENST00000472096 OCIAD2Q56VL3 154 aa8.29□□□□□ -1.08
CALD1-215ENST00000472096 UQCR10Q9UDW1 63 aa8.29□□□□□ -1.08
CALD1-215ENST00000472096 C1orf195Q5TG92 126 aa8.28□□□□□ -1.08
CALD1-215ENST00000472096 SNHG12Q9BXW3 62 aa8.28□□□□□ -1.08
CALD1-215ENST00000472096 KRTAP4-9Q9BYQ8 210 aa8.28□□□□□ -1.08
CALD1-215ENST00000472096 K7ERJ3 54 aa8.27□□□□□ -1.09
CALD1-215ENST00000472096 SEC61BP60468 96 aaKnown RBP8.27□□□□□ -1.09
CALD1-215ENST00000472096 A0A1B0GX51 115 aa8.26□□□□□ -1.09
CALD1-215ENST00000472096 TCL1BO95988 128 aa8.26□□□□□ -1.09
CALD1-215ENST00000472096 TRBV7-7A0A0K0K1E9 115 aa8.25□□□□□ -1.09
CALD1-215ENST00000472096 C9orf92A6NGG3 77 aa8.25□□□□□ -1.09
CALD1-215ENST00000472096 H3BUT2 72 aa8.25□□□□□ -1.09
CALD1-215ENST00000472096 FAT4Q6V0I7 4981 aa8.23□□□□□ -1.09
CALD1-215ENST00000472096 PSMB2P49721 201 aa8.21□□□□□ -1.1
CALD1-215ENST00000472096 NDUFV3P56181 108 aaKnown RBP8.21□□□□□ -1.1
CALD1-215ENST00000472096 KRTAP4-1Q9BYQ7 146 aa8.2□□□□□ -1.1
CALD1-215ENST00000472096 FABP2P12104 132 aa8.18□□□□□ -1.1
CALD1-215ENST00000472096 DNAL4O96015 105 aa8.17□□□□□ -1.1
CALD1-215ENST00000472096 COX6CP09669 75 aa8.17□□□□□ -1.1
CALD1-215ENST00000472096 Q6Q795 121 aa8.17□□□□□ -1.1
CALD1-215ENST00000472096 H3BMG7 143 aa8.16□□□□□ -1.1
CALD1-215ENST00000472096 SMIM6P0DI80 62 aa8.15□□□□□ -1.1
CALD1-215ENST00000472096 TEN1Q86WV5 123 aa8.15□□□□□ -1.1
CALD1-215ENST00000472096 ORMDL1Q9P0S3 153 aa8.15□□□□□ -1.1
CALD1-215ENST00000472096 PCOTHQ58A44 107 aa8.13□□□□□ -1.11
CALD1-215ENST00000472096 SS18L2Q9UHA2 77 aa8.13□□□□□ -1.11
CALD1-215ENST00000472096 H3BQ85 93 aa8.12□□□□□ -1.11
CALD1-215ENST00000472096 LST1O00453 97 aa8.12□□□□□ -1.11
CALD1-215ENST00000472096 PCP4P48539 62 aa8.11□□□□□ -1.11
CALD1-215ENST00000472096 A0A087WSZ3 146 aa8.1□□□□□ -1.11
CALD1-215ENST00000472096 TRACP01848 142 aa8.1□□□□□ -1.11
CALD1-215ENST00000472096 RPL37P61927 97 aaKnown RBP8.1□□□□□ -1.11
CALD1-215ENST00000472096 A0A1B0GV72 72 aa8.09□□□□□ -1.11
CALD1-215ENST00000472096 A0A1W2PNM2 257 aa8.09□□□□□ -1.11
CALD1-215ENST00000472096 TMEM256-PLSCR3K7ERE1 68 aa8.09□□□□□ -1.11
CALD1-215ENST00000472096 M0R143 59 aa8.09□□□□□ -1.11
CALD1-215ENST00000472096 SCGB1C2P0DMR2 95 aa8.08□□□□□ -1.12
CALD1-215ENST00000472096 KRTAP4-11Q9BYQ6 195 aa8.08□□□□□ -1.12
CALD1-215ENST00000472096 ANKRD29Q8N6D5 301 aa8.06□□□□□ -1.12
CALD1-215ENST00000472096 UBE2V1Q13404 147 aa8.05□□□□□ -1.12
CALD1-215ENST00000472096 Q96NJ1 140 aa8.05□□□□□ -1.12
CALD1-215ENST00000472096 OBSCN-AS1Q96MR7 158 aa8.04□□□□□ -1.12
CALD1-215ENST00000472096 TRBV7-4A0A0J9YYF1 115 aa8.03□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 72.6 ms