RNA–Protein interactions for RNA: ENST00000467985.1

COL7A1-207, Transcript of collagen type VII alpha 1 chain, humanhuman

TSL 5

Gene COL7A1, Length 709 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL7A1-207ENST00000467985 SNCGO76070 127 aa10.81□□□□□ -0.68
COL7A1-207ENST00000467985 H0YGX0 51 aa10.8□□□□□ -0.68
COL7A1-207ENST00000467985 SNHG12Q9BXW3 62 aa10.8□□□□□ -0.68
COL7A1-207ENST00000467985 SCGB1C2P0DMR2 95 aa10.79□□□□□ -0.68
COL7A1-207ENST00000467985 C9orf153Q5TBE3 101 aa10.79□□□□□ -0.68
COL7A1-207ENST00000467985 ST20-AS1Q8NBB2 130 aa10.78□□□□□ -0.68
COL7A1-207ENST00000467985 LINC00575Q6W349 94 aa10.77□□□□□ -0.69
COL7A1-207ENST00000467985 MUC17Q685J3 4493 aa10.76□□□□□ -0.69
COL7A1-207ENST00000467985 hADV29S1A0JD25 119 aa10.76□□□□□ -0.69
COL7A1-207ENST00000467985 KRTAP13-3Q3SY46 172 aa10.76□□□□□ -0.69
COL7A1-207ENST00000467985 Q8N377 158 aa10.76□□□□□ -0.69
COL7A1-207ENST00000467985 NAA38Q9BRA0 125 aaKnown RBP10.76□□□□□ -0.69
COL7A1-207ENST00000467985 COL5A1-AS1Q5SY13 56 aa10.75□□□□□ -0.69
COL7A1-207ENST00000467985 SPRR1BP22528 89 aa10.74□□□□□ -0.69
COL7A1-207ENST00000467985 LYRM7Q5U5X0 104 aa10.74□□□□□ -0.69
COL7A1-207ENST00000467985 CLEC2BQ92478 149 aa10.73□□□□□ -0.69
COL7A1-207ENST00000467985 H3BUT2 72 aa10.72□□□□□ -0.69
COL7A1-207ENST00000467985 FAT4Q6V0I7 4981 aa10.72□□□□□ -0.69
COL7A1-207ENST00000467985 DEFB105AQ8NG35 78 aa10.71□□□□□ -0.69
COL7A1-207ENST00000467985 C9orf118A6NHY6 69 aa10.7□□□□□ -0.7
COL7A1-207ENST00000467985 TAX1BP3O14907 124 aa10.7□□□□□ -0.7
COL7A1-207ENST00000467985 DNAL4O96015 105 aa10.7□□□□□ -0.7
COL7A1-207ENST00000467985 FAM218AQ96MZ4 157 aa10.7□□□□□ -0.7
COL7A1-207ENST00000467985 LAMTOR3Q9UHA4 124 aa10.7□□□□□ -0.7
COL7A1-207ENST00000467985 A0A1B0GX51 115 aa10.69□□□□□ -0.7
COL7A1-207ENST00000467985 Q6ZQY7 126 aa10.69□□□□□ -0.7
COL7A1-207ENST00000467985 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP10.67□□□□□ -0.7
COL7A1-207ENST00000467985 TEX49A0A1B0GTD5 131 aa10.65□□□□□ -0.7
COL7A1-207ENST00000467985 ASB16-AS1Q495Z4 193 aa10.65□□□□□ -0.7
COL7A1-207ENST00000467985 LIMD2Q9BT23 127 aa10.65□□□□□ -0.7
COL7A1-207ENST00000467985 FABP2P12104 132 aa10.64□□□□□ -0.71
COL7A1-207ENST00000467985 SEC61BP60468 96 aaKnown RBP10.64□□□□□ -0.71
COL7A1-207ENST00000467985 ATXN8Q156A1 80 aa10.64□□□□□ -0.71
COL7A1-207ENST00000467985 A0A1W2PPM0 123 aa10.63□□□□□ -0.71
COL7A1-207ENST00000467985 LST1O00453 97 aa10.63□□□□□ -0.71
COL7A1-207ENST00000467985 GHRHP01286 108 aa10.63□□□□□ -0.71
COL7A1-207ENST00000467985 OCIAD2Q56VL3 154 aa10.63□□□□□ -0.71
COL7A1-207ENST00000467985 IGLV5-48A0A075B6I7 105 aa10.61□□□□□ -0.71
COL7A1-207ENST00000467985 TRBV20-1A0A075B6N2 111 aa10.61□□□□□ -0.71
COL7A1-207ENST00000467985 TCL1BO95988 128 aa10.61□□□□□ -0.71
COL7A1-207ENST00000467985 TRACP01848 142 aa10.61□□□□□ -0.71
COL7A1-207ENST00000467985 CD164Q04900 197 aa10.6□□□□□ -0.71
COL7A1-207ENST00000467985 LCE2AQ5TA79 106 aaPredicted RBP10.6□□□□□ -0.71
COL7A1-207ENST00000467985 ORMDL1Q9P0S3 153 aa10.6□□□□□ -0.71
COL7A1-207ENST00000467985 HRCT1Q6UXD1 115 aa10.59□□□□□ -0.71
COL7A1-207ENST00000467985 F8WEM9 126 aa10.58□□□□□ -0.72
COL7A1-207ENST00000467985 PPDPFLQ8WWR9 84 aa10.58□□□□□ -0.72
COL7A1-207ENST00000467985 LINC01547P58512 204 aaPredicted RBP10.57□□□□□ -0.72
COL7A1-207ENST00000467985 XP32Q5T750 250 aa10.57□□□□□ -0.72
COL7A1-207ENST00000467985 H3BQ85 93 aa10.56□□□□□ -0.72
COL7A1-207ENST00000467985 SPCS1Q9Y6A9 102 aa10.56□□□□□ -0.72
COL7A1-207ENST00000467985 SMIM29Q86T20 159 aa10.54□□□□□ -0.72
COL7A1-207ENST00000467985 TMEM256-PLSCR3K7ERE1 68 aa10.52□□□□□ -0.73
COL7A1-207ENST00000467985 Q5XG85 94 aa10.51□□□□□ -0.73
COL7A1-207ENST00000467985 C9JAW5 83 aa10.5□□□□□ -0.73
COL7A1-207ENST00000467985 BAALC-AS2P0C853 105 aa10.5□□□□□ -0.73
COL7A1-207ENST00000467985 H3BMG7 143 aa10.49□□□□□ -0.73
COL7A1-207ENST00000467985 NDUFV3P56181 108 aaKnown RBP10.49□□□□□ -0.73
COL7A1-207ENST00000467985 GTF2H5Q6ZYL4 71 aa10.48□□□□□ -0.73
COL7A1-207ENST00000467985 K7EP34 96 aa10.47□□□□□ -0.73
COL7A1-207ENST00000467985 A0A1B0GV72 72 aa10.45□□□□□ -0.74
COL7A1-207ENST00000467985 KRTAP4-1Q9BYQ7 146 aa10.45□□□□□ -0.74
COL7A1-207ENST00000467985 UBE2V1Q13404 147 aa10.44□□□□□ -0.74
COL7A1-207ENST00000467985 ANKRD29Q8N6D5 301 aa10.44□□□□□ -0.74
COL7A1-207ENST00000467985 MTURNQ8N3F0 131 aa10.43□□□□□ -0.74
COL7A1-207ENST00000467985 C9orf92A6NGG3 77 aa10.42□□□□□ -0.74
COL7A1-207ENST00000467985 Q6JHZ5 121 aa10.42□□□□□ -0.74
COL7A1-207ENST00000467985 H3BT86 120 aa10.41□□□□□ -0.74
COL7A1-207ENST00000467985 C1orf195Q5TG92 126 aa10.41□□□□□ -0.74
COL7A1-207ENST00000467985 A0A0G2JQZ4 141 aa10.4□□□□□ -0.74
COL7A1-207ENST00000467985 IGLV8-61A0A075B6I0 122 aa10.39□□□□□ -0.75
COL7A1-207ENST00000467985 KRTAP9-2Q9BYQ4 174 aa10.38□□□□□ -0.75
COL7A1-207ENST00000467985 RBM3P98179 157 aaKnown RBP10.36□□□□□ -0.75
COL7A1-207ENST00000467985 IGFL1Q6UW32 110 aa10.36□□□□□ -0.75
COL7A1-207ENST00000467985 JMJD7-PLA2G4BH0Y9G9 81 aa10.35□□□□□ -0.75
COL7A1-207ENST00000467985 PCOTHQ58A44 107 aa10.35□□□□□ -0.75
COL7A1-207ENST00000467985 DSCR8Q96T75 97 aa10.35□□□□□ -0.75
COL7A1-207ENST00000467985 A0A1B0GV90 55 aa10.33□□□□□ -0.76
COL7A1-207ENST00000467985 F8W1H4 67 aa10.29□□□□□ -0.76
COL7A1-207ENST00000467985 VPS25Q9BRG1 176 aa10.29□□□□□ -0.76
COL7A1-207ENST00000467985 PRO0461Q9UI25 63 aa10.29□□□□□ -0.76
COL7A1-207ENST00000467985 TRBV7-7A0A0K0K1E9 115 aa10.28□□□□□ -0.76
COL7A1-207ENST00000467985 SMCPP49901 116 aaPredicted RBP10.27□□□□□ -0.77
COL7A1-207ENST00000467985 TEN1Q86WV5 123 aa10.27□□□□□ -0.77
COL7A1-207ENST00000467985 C14orf132Q9NPU4 83 aa10.27□□□□□ -0.77
COL7A1-207ENST00000467985 TRBV7-4A0A0J9YYF1 115 aa10.26□□□□□ -0.77
COL7A1-207ENST00000467985 CCKP06307 115 aa10.26□□□□□ -0.77
COL7A1-207ENST00000467985 RPL37P61927 97 aaKnown RBP10.25□□□□□ -0.77
COL7A1-207ENST00000467985 PDE6GP18545 87 aa10.24□□□□□ -0.77
COL7A1-207ENST00000467985 Q6Q795 121 aa10.23□□□□□ -0.77
COL7A1-207ENST00000467985 OBSCN-AS1Q96MR7 158 aa10.23□□□□□ -0.77
COL7A1-207ENST00000467985 LOC110117498A0A087WWA1 95 aa10.22□□□□□ -0.77
COL7A1-207ENST00000467985 A0A1W2PNM2 257 aa10.22□□□□□ -0.77
COL7A1-207ENST00000467985 LCE2CQ5TA81 110 aa10.22□□□□□ -0.77
COL7A1-207ENST00000467985 C21orf62-AS1Q17RA5 79 aa10.21□□□□□ -0.77
COL7A1-207ENST00000467985 Q6ZQT0 140 aa10.2□□□□□ -0.78
COL7A1-207ENST00000467985 SS18L2Q9UHA2 77 aa10.2□□□□□ -0.78
COL7A1-207ENST00000467985 A0A087WSZ3 146 aa10.19□□□□□ -0.78
COL7A1-207ENST00000467985 KRTAP19-2Q3LHN2 52 aa10.18□□□□□ -0.78
COL7A1-207ENST00000467985 ETDBQ3ZM63 59 aa10.17□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 66.3 ms