RNA–Protein interactions for RNA: ENST00000465591.1

LIME1-203, Transcript of Lck interacting transmembrane adaptor 1, humanhuman

TSL 2

Gene LIME1, Length 680 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIME1-203ENST00000465591 LAMTOR3Q9UHA4 124 aa12.12□□□□□ -0.47
LIME1-203ENST00000465591 LINC01547P58512 204 aaPredicted RBP12.11□□□□□ -0.47
LIME1-203ENST00000465591 NHP2Q9NX24 153 aaKnown RBP12.11□□□□□ -0.47
LIME1-203ENST00000465591 BVES-AS1Q5T3Y7 98 aa12.1□□□□□ -0.47
LIME1-203ENST00000465591 SMIM29Q86T20 159 aa12.1□□□□□ -0.47
LIME1-203ENST00000465591 TEX49A0A1B0GTD5 131 aa12.09□□□□□ -0.47
LIME1-203ENST00000465591 IGLV5-48A0A075B6I7 105 aa12.07□□□□□ -0.48
LIME1-203ENST00000465591 M0R143 59 aa12.06□□□□□ -0.48
LIME1-203ENST00000465591 ASB16-AS1Q495Z4 193 aa12.06□□□□□ -0.48
LIME1-203ENST00000465591 LCE2AQ5TA79 106 aaPredicted RBP12.06□□□□□ -0.48
LIME1-203ENST00000465591 KRTAP4-1Q9BYQ7 146 aa12.04□□□□□ -0.48
LIME1-203ENST00000465591 A0A0G2JQZ4 141 aa12.03□□□□□ -0.48
LIME1-203ENST00000465591 LINC00575Q6W349 94 aa12.03□□□□□ -0.48
LIME1-203ENST00000465591 H0YGX0 51 aa12.02□□□□□ -0.49
LIME1-203ENST00000465591 K7ERJ3 54 aa12.01□□□□□ -0.49
LIME1-203ENST00000465591 SNCGO76070 127 aa12.01□□□□□ -0.49
LIME1-203ENST00000465591 LIMD2Q9BT23 127 aa12.01□□□□□ -0.49
LIME1-203ENST00000465591 hADV29S1A0JD25 119 aa12□□□□□ -0.49
LIME1-203ENST00000465591 XP32Q5T750 250 aa12□□□□□ -0.49
LIME1-203ENST00000465591 CD164Q04900 197 aa11.99□□□□□ -0.49
LIME1-203ENST00000465591 PSMB2P49721 201 aa11.97□□□□□ -0.49
LIME1-203ENST00000465591 SEC61BP60468 96 aaKnown RBP11.96□□□□□ -0.49
LIME1-203ENST00000465591 COX6CP09669 75 aa11.95□□□□□ -0.5
LIME1-203ENST00000465591 TRIAP1O43715 76 aa11.94□□□□□ -0.5
LIME1-203ENST00000465591 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP11.93□□□□□ -0.5
LIME1-203ENST00000465591 Q6ZQY7 126 aa11.92□□□□□ -0.5
LIME1-203ENST00000465591 A0A1B0GX51 115 aa11.91□□□□□ -0.5
LIME1-203ENST00000465591 Q5XG85 94 aa11.91□□□□□ -0.5
LIME1-203ENST00000465591 C9orf92A6NGG3 77 aa11.9□□□□□ -0.5
LIME1-203ENST00000465591 OCIAD2Q56VL3 154 aa11.88□□□□□ -0.51
LIME1-203ENST00000465591 C1orf195Q5TG92 126 aa11.88□□□□□ -0.51
LIME1-203ENST00000465591 SCGB1C2P0DMR2 95 aa11.87□□□□□ -0.51
LIME1-203ENST00000465591 BATFQ16520 125 aa11.87□□□□□ -0.51
LIME1-203ENST00000465591 PPDPFLQ8WWR9 84 aa11.87□□□□□ -0.51
LIME1-203ENST00000465591 FAM218AQ96MZ4 157 aa11.87□□□□□ -0.51
LIME1-203ENST00000465591 GHRHP01286 108 aa11.86□□□□□ -0.51
LIME1-203ENST00000465591 CLEC2BQ92478 149 aa11.84□□□□□ -0.51
LIME1-203ENST00000465591 F8WEM9 126 aa11.83□□□□□ -0.52
LIME1-203ENST00000465591 DNAL4O96015 105 aa11.82□□□□□ -0.52
LIME1-203ENST00000465591 SNHG12Q9BXW3 62 aa11.81□□□□□ -0.52
LIME1-203ENST00000465591 IGLV8-61A0A075B6I0 122 aa11.79□□□□□ -0.52
LIME1-203ENST00000465591 PCOTHQ58A44 107 aa11.79□□□□□ -0.52
LIME1-203ENST00000465591 IGFL1Q6UW32 110 aa11.78□□□□□ -0.52
LIME1-203ENST00000465591 H3BQ85 93 aa11.77□□□□□ -0.53
LIME1-203ENST00000465591 KRTAP9-2Q9BYQ4 174 aa11.76□□□□□ -0.53
LIME1-203ENST00000465591 TRACP01848 142 aa11.75□□□□□ -0.53
LIME1-203ENST00000465591 LYRM7Q5U5X0 104 aa11.75□□□□□ -0.53
LIME1-203ENST00000465591 Q6JHZ5 121 aa11.75□□□□□ -0.53
LIME1-203ENST00000465591 ORMDL1Q9P0S3 153 aa11.75□□□□□ -0.53
LIME1-203ENST00000465591 LST1O00453 97 aa11.74□□□□□ -0.53
LIME1-203ENST00000465591 TCL1BO95988 128 aa11.74□□□□□ -0.53
LIME1-203ENST00000465591 NAA38Q9BRA0 125 aaKnown RBP11.74□□□□□ -0.53
LIME1-203ENST00000465591 FABP2P12104 132 aa11.73□□□□□ -0.53
LIME1-203ENST00000465591 TRBV7-7A0A0K0K1E9 115 aa11.72□□□□□ -0.53
LIME1-203ENST00000465591 H3BUT2 72 aa11.71□□□□□ -0.53
LIME1-203ENST00000465591 KRTAP19-2Q3LHN2 52 aa11.71□□□□□ -0.53
LIME1-203ENST00000465591 LCE2CQ5TA81 110 aa11.71□□□□□ -0.53
LIME1-203ENST00000465591 NDUFV3P56181 108 aaKnown RBP11.7□□□□□ -0.54
LIME1-203ENST00000465591 ATXN8Q156A1 80 aa11.7□□□□□ -0.54
LIME1-203ENST00000465591 C9orf118A6NHY6 69 aa11.69□□□□□ -0.54
LIME1-203ENST00000465591 TMEM256-PLSCR3K7ERE1 68 aa11.69□□□□□ -0.54
LIME1-203ENST00000465591 PCP4L1A6NKN8 68 aa11.68□□□□□ -0.54
LIME1-203ENST00000465591 TAX1BP3O14907 124 aa11.67□□□□□ -0.54
LIME1-203ENST00000465591 TRBV20-1A0A075B6N2 111 aa11.66□□□□□ -0.54
LIME1-203ENST00000465591 RPL37P61927 97 aaKnown RBP11.65□□□□□ -0.54
LIME1-203ENST00000465591 H3BMG7 143 aa11.64□□□□□ -0.55
LIME1-203ENST00000465591 COL5A1-AS1Q5SY13 56 aa11.64□□□□□ -0.55
LIME1-203ENST00000465591 UBE2V1Q13404 147 aa11.62□□□□□ -0.55
LIME1-203ENST00000465591 A0A1W2PPM0 123 aa11.61□□□□□ -0.55
LIME1-203ENST00000465591 BAALC-AS2P0C853 105 aa11.61□□□□□ -0.55
LIME1-203ENST00000465591 ANKRD29Q8N6D5 301 aa11.56□□□□□ -0.56
LIME1-203ENST00000465591 Q6Q795 121 aa11.55□□□□□ -0.56
LIME1-203ENST00000465591 MT1HP80294 61 aa11.53□□□□□ -0.56
LIME1-203ENST00000465591 C9JAW5 83 aa11.52□□□□□ -0.57
LIME1-203ENST00000465591 TEN1Q86WV5 123 aa11.52□□□□□ -0.57
LIME1-203ENST00000465591 OBSCN-AS1Q96MR7 158 aa11.52□□□□□ -0.57
LIME1-203ENST00000465591 A0A1B0GV72 72 aa11.51□□□□□ -0.57
LIME1-203ENST00000465591 RBM3P98179 157 aaKnown RBP11.5□□□□□ -0.57
LIME1-203ENST00000465591 SPCS1Q9Y6A9 102 aa11.49□□□□□ -0.57
LIME1-203ENST00000465591 A0A087WSZ3 146 aa11.48□□□□□ -0.57
LIME1-203ENST00000465591 DSCR8Q96T75 97 aa11.47□□□□□ -0.57
LIME1-203ENST00000465591 SS18L2Q9UHA2 77 aa11.47□□□□□ -0.57
LIME1-203ENST00000465591 JMJD7-PLA2G4BH0Y9G9 81 aa11.46□□□□□ -0.57
LIME1-203ENST00000465591 A0A1W2PNM2 257 aa11.45□□□□□ -0.58
LIME1-203ENST00000465591 Q96NJ1 140 aa11.45□□□□□ -0.58
LIME1-203ENST00000465591 H3BT86 120 aa11.44□□□□□ -0.58
LIME1-203ENST00000465591 Q75L30 129 aa11.44□□□□□ -0.58
LIME1-203ENST00000465591 TRBV7-4A0A0J9YYF1 115 aa11.43□□□□□ -0.58
LIME1-203ENST00000465591 CCKP06307 115 aa11.42□□□□□ -0.58
LIME1-203ENST00000465591 FLGP20930 4061 aaPredicted RBP11.38□□□□□ -0.59
LIME1-203ENST00000465591 VPS25Q9BRG1 176 aa11.38□□□□□ -0.59
LIME1-203ENST00000465591 K7EP34 96 aa11.37□□□□□ -0.59
LIME1-203ENST00000465591 PDE6GP18545 87 aa11.37□□□□□ -0.59
LIME1-203ENST00000465591 LCE2DQ5TA82 110 aaPredicted RBP11.37□□□□□ -0.59
LIME1-203ENST00000465591 MTURNQ8N3F0 131 aa11.37□□□□□ -0.59
LIME1-203ENST00000465591 ATP11AUNQ6ZP68 121 aa11.36□□□□□ -0.59
LIME1-203ENST00000465591 GTF2H5Q6ZYL4 71 aa11.36□□□□□ -0.59
LIME1-203ENST00000465591 KRTAP9-6A0A140TA67 174 aa11.35□□□□□ -0.59
LIME1-203ENST00000465591 LOC110117498A0A087WWA1 95 aa11.34□□□□□ -0.59
LIME1-203ENST00000465591 C21orf62-AS1Q17RA5 79 aa11.34□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 94.1 ms