RNA–Protein interactions for RNA: ENST00000465036.1

UBR4-209, Transcript of ubiquitin protein ligase E3 component n-recognin 4, humanhuman

TSL 2

Gene UBR4, Length 392 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR4-209ENST00000465036 KRTAP10-4P60372 401 aaPredicted RBP2.37□□□□□ -2.03
UBR4-209ENST00000465036 SOSTDC1Q6X4U4 206 aa2.37□□□□□ -2.03
UBR4-209ENST00000465036 Q6ZUT4 128 aa2.37□□□□□ -2.03
UBR4-209ENST00000465036 PHF5AQ7RTV0 110 aaKnown RBP2.37□□□□□ -2.03
UBR4-209ENST00000465036 SMIM2Q9BVW6 85 aa2.37□□□□□ -2.03
UBR4-209ENST00000465036 CDC42SE2Q9NRR3 84 aa2.37□□□□□ -2.03
UBR4-209ENST00000465036 UBE2D4Q9Y2X8 147 aa2.37□□□□□ -2.03
UBR4-209ENST00000465036 A0A1B0GU33 70 aa2.36□□□□□ -2.03
UBR4-209ENST00000465036 H3BMG7 143 aa2.36□□□□□ -2.03
UBR4-209ENST00000465036 TCL1BO95988 128 aa2.36□□□□□ -2.03
UBR4-209ENST00000465036 FCER1GP30273 86 aa2.36□□□□□ -2.03
UBR4-209ENST00000465036 CNBPP62633 177 aaKnown RBP2.36□□□□□ -2.03
UBR4-209ENST00000465036 TMEM136Q6ZRR5 245 aa2.36□□□□□ -2.03
UBR4-209ENST00000465036 C9orf163Q8N9P6 203 aa2.36□□□□□ -2.03
UBR4-209ENST00000465036 PRELID3AQ96N28 172 aa2.36□□□□□ -2.03
UBR4-209ENST00000465036 C20orf78Q9BR46 151 aa2.36□□□□□ -2.03
UBR4-209ENST00000465036 TRAV7A0A075B6U4 112 aa2.35□□□□□ -2.03
UBR4-209ENST00000465036 GVQW2A0A096LPI5 108 aaPredicted RBP2.35□□□□□ -2.03
UBR4-209ENST00000465036 COX6A2Q02221 97 aa2.35□□□□□ -2.03
UBR4-209ENST00000465036 KRTAP25-1Q3LHN0 102 aa2.35□□□□□ -2.03
UBR4-209ENST00000465036 C5orf38Q86SI9 138 aa2.35□□□□□ -2.03
UBR4-209ENST00000465036 SEC11CQ9BY50 192 aa2.35□□□□□ -2.03
UBR4-209ENST00000465036 A0A096LNI7 61 aa2.34□□□□□ -2.03
UBR4-209ENST00000465036 IGKV2-24A0A0C4DH68 120 aa2.34□□□□□ -2.03
UBR4-209ENST00000465036 C11orf86A6NJI1 115 aa2.34□□□□□ -2.03
UBR4-209ENST00000465036 PPP1R17O96001 155 aa2.34□□□□□ -2.03
UBR4-209ENST00000465036 MT-ND6P03923 174 aa2.34□□□□□ -2.03
UBR4-209ENST00000465036 S100A8P05109 93 aa2.34□□□□□ -2.03
UBR4-209ENST00000465036 IFI27P40305 119 aaPredicted RBP2.34□□□□□ -2.03
UBR4-209ENST00000465036 SS18Q15532 418 aa2.34□□□□□ -2.03
UBR4-209ENST00000465036 SPINT4Q6UDR6 99 aa2.34□□□□□ -2.03
UBR4-209ENST00000465036 Q8NDZ9 215 aa2.34□□□□□ -2.03
UBR4-209ENST00000465036 TIMM21Q9BVV7 248 aa2.34□□□□□ -2.03
UBR4-209ENST00000465036 DMBT1Q9UGM3 2413 aaPredicted RBP2.34□□□□□ -2.03
UBR4-209ENST00000465036 IGHV3-64A0A075B6Q5 118 aa2.33□□□□□ -2.04
UBR4-209ENST00000465036 TRAV16A0A0A6YYK6 109 aaPredicted RBP2.33□□□□□ -2.04
UBR4-209ENST00000465036 H7C2G1 150 aa2.33□□□□□ -2.04
UBR4-209ENST00000465036 APOC3P02656 99 aa2.33□□□□□ -2.04
UBR4-209ENST00000465036 SMIM6P0DI80 62 aa2.33□□□□□ -2.04
UBR4-209ENST00000465036 CRYGAP11844 174 aa2.33□□□□□ -2.04
UBR4-209ENST00000465036 MRPS36P82909 103 aaKnown RBP2.33□□□□□ -2.04
UBR4-209ENST00000465036 CIRBPQ14011 172 aaKnown RBP2.33□□□□□ -2.04
UBR4-209ENST00000465036 C7orf65Q6ZTY9 151 aa2.33□□□□□ -2.04
UBR4-209ENST00000465036 Q8N8P6 123 aa2.33□□□□□ -2.04
UBR4-209ENST00000465036 SPACA4Q8TDM5 124 aa2.33□□□□□ -2.04
UBR4-209ENST00000465036 RNF213Q63HN8 5207 aa2.32□□□□□ -2.04
UBR4-209ENST00000465036 TRBV10-2A0A0K0K1G8 114 aa2.32□□□□□ -2.04
UBR4-209ENST00000465036 IGIPA6NJ69 53 aa2.32□□□□□ -2.04
UBR4-209ENST00000465036 UBE2D1P51668 147 aa2.32□□□□□ -2.04
UBR4-209ENST00000465036 RPL37AP61513 92 aaKnown RBP2.32□□□□□ -2.04
UBR4-209ENST00000465036 SPAG11BQ08648 103 aa2.32□□□□□ -2.04
UBR4-209ENST00000465036 OCIAD2Q56VL3 154 aa2.32□□□□□ -2.04
UBR4-209ENST00000465036 DPH3Q96FX2 82 aa2.32□□□□□ -2.04
UBR4-209ENST00000465036 AMELXQ99217 191 aa2.32□□□□□ -2.04
UBR4-209ENST00000465036 FAM236AA0A1B0GUQ0 79 aa2.31□□□□□ -2.04
UBR4-209ENST00000465036 FAM236BA0A1B0GV22 79 aa2.31□□□□□ -2.04
UBR4-209ENST00000465036 A0A1W2PNN7 141 aa2.31□□□□□ -2.04
UBR4-209ENST00000465036 LINC01546A6NGU7 62 aa2.31□□□□□ -2.04
UBR4-209ENST00000465036 TIMM17BO60830 172 aa2.31□□□□□ -2.04
UBR4-209ENST00000465036 FXYD2P54710 66 aa2.31□□□□□ -2.04
UBR4-209ENST00000465036 C2orf82Q6UX34 121 aa2.31□□□□□ -2.04
UBR4-209ENST00000465036 UNQ6190/PRO20217Q6UXQ8 127 aa2.31□□□□□ -2.04
UBR4-209ENST00000465036 TMEM141Q96I45 108 aa2.31□□□□□ -2.04
UBR4-209ENST00000465036 C14orf144Q96I85 54 aa2.31□□□□□ -2.04
UBR4-209ENST00000465036 NXT2Q9NPJ8 142 aaKnown RBP2.31□□□□□ -2.04
UBR4-209ENST00000465036 PLAC8Q9NZF1 115 aa2.31□□□□□ -2.04
UBR4-209ENST00000465036 C6orf48Q9UBA6 75 aa2.31□□□□□ -2.04
UBR4-209ENST00000465036 COLCA2A8K830 154 aa2.3□□□□□ -2.04
UBR4-209ENST00000465036 UQCRQO14949 82 aa2.3□□□□□ -2.04
UBR4-209ENST00000465036 AKR1D1P51857 326 aa2.3□□□□□ -2.04
UBR4-209ENST00000465036 PMCHL1Q16048 86 aa2.3□□□□□ -2.04
UBR4-209ENST00000465036 C9orf116Q5BN46 136 aaPredicted RBP2.3□□□□□ -2.04
UBR4-209ENST00000465036 C18orf32Q8TCD1 76 aa2.3□□□□□ -2.04
UBR4-209ENST00000465036 DIRC1Q969H9 104 aa2.3□□□□□ -2.04
UBR4-209ENST00000465036 NAA38Q9BRA0 125 aaKnown RBP2.3□□□□□ -2.04
UBR4-209ENST00000465036 HIGD2AQ9BW72 106 aa2.3□□□□□ -2.04
UBR4-209ENST00000465036 NHP2Q9NX24 153 aaKnown RBP2.3□□□□□ -2.04
UBR4-209ENST00000465036 CDKN2A-AS1Q9UH64 79 aa2.3□□□□□ -2.04
UBR4-209ENST00000465036 LPAP08519 4548 aa2.3□□□□□ -2.04
UBR4-209ENST00000465036 K7EMI3 77 aa2.29□□□□□ -2.04
UBR4-209ENST00000465036 NDUFA1O15239 70 aa2.29□□□□□ -2.04
UBR4-209ENST00000465036 SVBPQ8N300 66 aa2.29□□□□□ -2.04
UBR4-209ENST00000465036 CHCHD1Q96BP2 118 aaKnown RBP2.29□□□□□ -2.04
UBR4-209ENST00000465036 CST9LQ9H4G1 147 aa2.29□□□□□ -2.04
UBR4-209ENST00000465036 MRPL35Q9NZE8 188 aaKnown RBP2.29□□□□□ -2.04
UBR4-209ENST00000465036 TOMM7Q9P0U1 55 aa2.29□□□□□ -2.04
UBR4-209ENST00000465036 C20orf202A1L168 122 aa2.28□□□□□ -2.04
UBR4-209ENST00000465036 HBDP02042 147 aa2.28□□□□□ -2.04
UBR4-209ENST00000465036 SPINK8P0C7L1 97 aa2.28□□□□□ -2.04
UBR4-209ENST00000465036 MT1HL1P0DM35 61 aa2.28□□□□□ -2.04
UBR4-209ENST00000465036 Q6ZQT0 140 aa2.28□□□□□ -2.04
UBR4-209ENST00000465036 RETNLBQ9BQ08 111 aa2.28□□□□□ -2.04
UBR4-209ENST00000465036 SMCO4Q9NRQ5 59 aa2.28□□□□□ -2.04
UBR4-209ENST00000465036 R4GN34 69 aa2.28□□□□□ -2.04
UBR4-209ENST00000465036 LRP2P98164 4655 aa2.28□□□□□ -2.04
UBR4-209ENST00000465036 TRBV30A0A0K0K1B3 111 aa2.27□□□□□ -2.05
UBR4-209ENST00000465036 NUPR1O60356 82 aa2.27□□□□□ -2.05
UBR4-209ENST00000465036 IGLC3P0DOY3 106 aa2.27□□□□□ -2.05
UBR4-209ENST00000465036 FABP4P15090 132 aa2.27□□□□□ -2.05
UBR4-209ENST00000465036 TEN1Q86WV5 123 aa2.27□□□□□ -2.05
Retrieved 100 of 20,778 RNA–protein pairs in 173.4 ms