RNA–Protein interactions for RNA: ENST00000461127.5

TOP3A-202, Transcript of DNA topoisomerase III alpha, humanhuman

TSL 3

Gene TOP3A, Length 823 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP3A-202ENST00000461127 KRTAP4-16G5E9R7 235 aaPredicted RBP9.76□□□□□ -0.85
TOP3A-202ENST00000461127 ELOF1P60002 83 aaKnown RBP9.76□□□□□ -0.85
TOP3A-202ENST00000461127 FABP2P12104 132 aa9.75□□□□□ -0.85
TOP3A-202ENST00000461127 PRLHP81277 87 aa9.75□□□□□ -0.85
TOP3A-202ENST00000461127 C4orf48Q5BLP8 95 aa9.75□□□□□ -0.85
TOP3A-202ENST00000461127 Q6ZRX8 168 aa9.75□□□□□ -0.85
TOP3A-202ENST00000461127 A0A1W2PPM0 123 aa9.74□□□□□ -0.85
TOP3A-202ENST00000461127 SLC25A20O43772 301 aa9.73□□□□□ -0.85
TOP3A-202ENST00000461127 SNCGO76070 127 aa9.73□□□□□ -0.85
TOP3A-202ENST00000461127 C3orf22Q8N5N4 141 aa9.73□□□□□ -0.85
TOP3A-202ENST00000461127 CLEC2BQ92478 149 aa9.73□□□□□ -0.85
TOP3A-202ENST00000461127 DHRS4-AS1Q9P1J3 65 aa9.72□□□□□ -0.85
TOP3A-202ENST00000461127 LINC00575Q6W349 94 aa9.71□□□□□ -0.86
TOP3A-202ENST00000461127 HIGD2AQ9BW72 106 aa9.71□□□□□ -0.86
TOP3A-202ENST00000461127 ATXN8Q156A1 80 aa9.69□□□□□ -0.86
TOP3A-202ENST00000461127 FAM218AQ96MZ4 157 aa9.69□□□□□ -0.86
TOP3A-202ENST00000461127 TRBV20-1A0A075B6N2 111 aa9.68□□□□□ -0.86
TOP3A-202ENST00000461127 hADV29S1A0JD25 119 aa9.68□□□□□ -0.86
TOP3A-202ENST00000461127 Q9BRP9 147 aa9.68□□□□□ -0.86
TOP3A-202ENST00000461127 SPCS1Q9Y6A9 102 aa9.68□□□□□ -0.86
TOP3A-202ENST00000461127 A0A1B0GX51 115 aa9.67□□□□□ -0.86
TOP3A-202ENST00000461127 LST1O00453 97 aa9.67□□□□□ -0.86
TOP3A-202ENST00000461127 TCL1BO95988 128 aa9.67□□□□□ -0.86
TOP3A-202ENST00000461127 DNAL4O96015 105 aa9.66□□□□□ -0.86
TOP3A-202ENST00000461127 LCE2CQ5TA81 110 aa9.66□□□□□ -0.86
TOP3A-202ENST00000461127 SMCR5Q8TEV8 140 aa9.66□□□□□ -0.86
TOP3A-202ENST00000461127 TRACP01848 142 aa9.64□□□□□ -0.87
TOP3A-202ENST00000461127 K7EP34 96 aa9.63□□□□□ -0.87
TOP3A-202ENST00000461127 ERC2-IT1O76042 136 aa9.63□□□□□ -0.87
TOP3A-202ENST00000461127 SPINK1P00995 79 aa9.62□□□□□ -0.87
TOP3A-202ENST00000461127 MT1HP80294 61 aa9.62□□□□□ -0.87
TOP3A-202ENST00000461127 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP9.62□□□□□ -0.87
TOP3A-202ENST00000461127 GTF2H5Q6ZYL4 71 aa9.62□□□□□ -0.87
TOP3A-202ENST00000461127 Q6ZQY7 126 aa9.61□□□□□ -0.87
TOP3A-202ENST00000461127 Q8NBF4 154 aa9.61□□□□□ -0.87
TOP3A-202ENST00000461127 A0A1B0GV90 55 aa9.6□□□□□ -0.87
TOP3A-202ENST00000461127 ZNF706Q9Y5V0 76 aaPredicted RBP9.6□□□□□ -0.87
TOP3A-202ENST00000461127 H3BMG7 143 aa9.59□□□□□ -0.87
TOP3A-202ENST00000461127 ST20-AS1Q8NBB2 130 aa9.59□□□□□ -0.87
TOP3A-202ENST00000461127 SPRR4Q96PI1 79 aa9.59□□□□□ -0.87
TOP3A-202ENST00000461127 GHRHP01286 108 aa9.58□□□□□ -0.88
TOP3A-202ENST00000461127 OCIAD2Q56VL3 154 aa9.58□□□□□ -0.88
TOP3A-202ENST00000461127 XP32Q5T750 250 aa9.58□□□□□ -0.88
TOP3A-202ENST00000461127 DEFB105AQ8NG35 78 aa9.58□□□□□ -0.88
TOP3A-202ENST00000461127 ORMDL1Q9P0S3 153 aa9.58□□□□□ -0.88
TOP3A-202ENST00000461127 C9JAW5 83 aa9.57□□□□□ -0.88
TOP3A-202ENST00000461127 GAGE2AQ6NT46 116 aa9.56□□□□□ -0.88
TOP3A-202ENST00000461127 KRTAP9-7A8MTY7 169 aa9.55□□□□□ -0.88
TOP3A-202ENST00000461127 H3BQ85 93 aa9.55□□□□□ -0.88
TOP3A-202ENST00000461127 LORP23490 312 aaPredicted RBP9.55□□□□□ -0.88
TOP3A-202ENST00000461127 KRTAP19-2Q3LHN2 52 aa9.55□□□□□ -0.88
TOP3A-202ENST00000461127 TEX49A0A1B0GTD5 131 aa9.54□□□□□ -0.88
TOP3A-202ENST00000461127 KRTAP10-6P60371 365 aaPredicted RBP9.54□□□□□ -0.88
TOP3A-202ENST00000461127 IGLV5-48A0A075B6I7 105 aa9.53□□□□□ -0.88
TOP3A-202ENST00000461127 BAALC-AS2P0C853 105 aa9.53□□□□□ -0.88
TOP3A-202ENST00000461127 PPDPFLQ8WWR9 84 aa9.53□□□□□ -0.88
TOP3A-202ENST00000461127 TMEM256-PLSCR3K7ERE1 68 aa9.51□□□□□ -0.89
TOP3A-202ENST00000461127 RPS29P62273 56 aaKnown RBP9.51□□□□□ -0.89
TOP3A-202ENST00000461127 MTURNQ8N3F0 131 aa9.51□□□□□ -0.89
TOP3A-202ENST00000461127 UBE2V1Q13404 147 aa9.5□□□□□ -0.89
TOP3A-202ENST00000461127 Q8N377 158 aa9.5□□□□□ -0.89
TOP3A-202ENST00000461127 H3BT86 120 aa9.49□□□□□ -0.89
TOP3A-202ENST00000461127 SPRR1BP22528 89 aa9.49□□□□□ -0.89
TOP3A-202ENST00000461127 M0R2T5 61 aa9.48□□□□□ -0.89
TOP3A-202ENST00000461127 LINC00483Q53H64 154 aa9.48□□□□□ -0.89
TOP3A-202ENST00000461127 LAMTOR3Q9UHA4 124 aa9.48□□□□□ -0.89
TOP3A-202ENST00000461127 ANKRD29Q8N6D5 301 aa9.47□□□□□ -0.89
TOP3A-202ENST00000461127 IGLV8-61A0A075B6I0 122 aa9.46□□□□□ -0.9
TOP3A-202ENST00000461127 KRTAP9-1A8MXZ3 250 aaPredicted RBP9.46□□□□□ -0.9
TOP3A-202ENST00000461127 F8W1H4 67 aa9.46□□□□□ -0.9
TOP3A-202ENST00000461127 F8WEM9 126 aa9.46□□□□□ -0.9
TOP3A-202ENST00000461127 NDUFV3P56181 108 aaKnown RBP9.45□□□□□ -0.9
TOP3A-202ENST00000461127 PRO0461Q9UI25 63 aa9.45□□□□□ -0.9
TOP3A-202ENST00000461127 PCOTHQ58A44 107 aa9.44□□□□□ -0.9
TOP3A-202ENST00000461127 SMCPP49901 116 aaPredicted RBP9.43□□□□□ -0.9
TOP3A-202ENST00000461127 IGLV9-49A0A0B4J1Y8 123 aa9.42□□□□□ -0.9
TOP3A-202ENST00000461127 MOBPQ13875 183 aa9.42□□□□□ -0.9
TOP3A-202ENST00000461127 SSBP3-AS1Q7Z2R9 100 aa9.42□□□□□ -0.9
TOP3A-202ENST00000461127 SMIM29Q86T20 159 aa9.42□□□□□ -0.9
TOP3A-202ENST00000461127 A0A1B0GV72 72 aa9.41□□□□□ -0.9
TOP3A-202ENST00000461127 C9orf153Q5TBE3 101 aa9.41□□□□□ -0.9
TOP3A-202ENST00000461127 JMJD7-PLA2G4BH0Y9G9 81 aa9.38□□□□□ -0.91
TOP3A-202ENST00000461127 RBM3P98179 157 aaKnown RBP9.37□□□□□ -0.91
TOP3A-202ENST00000461127 Q6JHZ5 121 aa9.35□□□□□ -0.91
TOP3A-202ENST00000461127 COX6B2Q6YFQ2 88 aa9.35□□□□□ -0.91
TOP3A-202ENST00000461127 ETDBQ3ZM63 59 aa9.34□□□□□ -0.91
TOP3A-202ENST00000461127 TEN1Q86WV5 123 aa9.34□□□□□ -0.91
TOP3A-202ENST00000461127 DSCR8Q96T75 97 aa9.34□□□□□ -0.91
TOP3A-202ENST00000461127 OBSCN-AS1Q96MR7 158 aa9.32□□□□□ -0.92
TOP3A-202ENST00000461127 C14orf132Q9NPU4 83 aa9.31□□□□□ -0.92
TOP3A-202ENST00000461127 IGFL1Q6UW32 110 aa9.3□□□□□ -0.92
TOP3A-202ENST00000461127 C9orf92A6NGG3 77 aa9.29□□□□□ -0.92
TOP3A-202ENST00000461127 PDE6GP18545 87 aa9.29□□□□□ -0.92
TOP3A-202ENST00000461127 TRBV7-4A0A0J9YYF1 115 aa9.28□□□□□ -0.92
TOP3A-202ENST00000461127 LOC110117498A0A087WWA1 95 aa9.27□□□□□ -0.93
TOP3A-202ENST00000461127 A0A0G2JQZ4 141 aa9.27□□□□□ -0.93
TOP3A-202ENST00000461127 VPS25Q9BRG1 176 aa9.27□□□□□ -0.93
TOP3A-202ENST00000461127 CCKP06307 115 aa9.25□□□□□ -0.93
TOP3A-202ENST00000461127 C21orf62-AS1Q17RA5 79 aa9.25□□□□□ -0.93
TOP3A-202ENST00000461127 LIMD2Q9BT23 127 aa9.25□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 187.2 ms