RNA–Protein interactions for RNA: ENST00000458038.5

CPNE1-220, Transcript of copine 1, humanhuman

TSL 3

Gene CPNE1, Length 596 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-220ENST00000458038 COA6Q5JTJ3 125 aaKnown RBP11.32□□□□□ -0.6
CPNE1-220ENST00000458038 LINC00575Q6W349 94 aa11.28□□□□□ -0.6
CPNE1-220ENST00000458038 ATP11AUNQ6ZP68 121 aa11.28□□□□□ -0.6
CPNE1-220ENST00000458038 PCP2Q8IVA1 136 aa11.28□□□□□ -0.6
CPNE1-220ENST00000458038 CLEC2BQ92478 149 aa11.27□□□□□ -0.61
CPNE1-220ENST00000458038 TRBV7-7A0A0K0K1E9 115 aa11.26□□□□□ -0.61
CPNE1-220ENST00000458038 SNRPEP62304 92 aaKnown RBP11.26□□□□□ -0.61
CPNE1-220ENST00000458038 Q75L30 129 aa11.26□□□□□ -0.61
CPNE1-220ENST00000458038 hADV29S1A0JD25 119 aa11.25□□□□□ -0.61
CPNE1-220ENST00000458038 Q6ZQY7 126 aa11.24□□□□□ -0.61
CPNE1-220ENST00000458038 ATOH7Q8N100 152 aa11.24□□□□□ -0.61
CPNE1-220ENST00000458038 OCIAD2Q56VL3 154 aa11.23□□□□□ -0.61
CPNE1-220ENST00000458038 IGFL1Q6UW32 110 aa11.22□□□□□ -0.61
CPNE1-220ENST00000458038 OBSCN-AS1Q96MR7 158 aa11.21□□□□□ -0.61
CPNE1-220ENST00000458038 Q6Q795 121 aa11.2□□□□□ -0.62
CPNE1-220ENST00000458038 PPDPFLQ8WWR9 84 aa11.2□□□□□ -0.62
CPNE1-220ENST00000458038 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP11.18□□□□□ -0.62
CPNE1-220ENST00000458038 SCGB1D1O95968 90 aa11.17□□□□□ -0.62
CPNE1-220ENST00000458038 LST1O00453 97 aa11.15□□□□□ -0.62
CPNE1-220ENST00000458038 SNHG12Q9BXW3 62 aa11.14□□□□□ -0.63
CPNE1-220ENST00000458038 BVES-AS1Q5T3Y7 98 aa11.13□□□□□ -0.63
CPNE1-220ENST00000458038 CFC1P0CG37 223 aa11.12□□□□□ -0.63
CPNE1-220ENST00000458038 Q96NJ1 140 aa11.11□□□□□ -0.63
CPNE1-220ENST00000458038 SS18L2Q9UHA2 77 aa11.11□□□□□ -0.63
CPNE1-220ENST00000458038 HSBP1L1C9JCN9 74 aa11.09□□□□□ -0.63
CPNE1-220ENST00000458038 C20orf166-AS1Q96NR2 134 aa11.07□□□□□ -0.64
CPNE1-220ENST00000458038 TRBV20-1A0A075B6N2 111 aa11.05□□□□□ -0.64
CPNE1-220ENST00000458038 H3BUT2 72 aa11.04□□□□□ -0.64
CPNE1-220ENST00000458038 SNCGO76070 127 aa11.04□□□□□ -0.64
CPNE1-220ENST00000458038 A8MUU9 505 aa11.03□□□□□ -0.64
CPNE1-220ENST00000458038 C12orf57Q99622 126 aa11.03□□□□□ -0.64
CPNE1-220ENST00000458038 TEN1Q86WV5 123 aa11.02□□□□□ -0.65
CPNE1-220ENST00000458038 HIST1H4GQ99525 98 aa11□□□□□ -0.65
CPNE1-220ENST00000458038 KRTAP9-8Q9BYQ0 159 aa11□□□□□ -0.65
CPNE1-220ENST00000458038 S100A2P29034 98 aa10.98□□□□□ -0.65
CPNE1-220ENST00000458038 HIST1H2BLQ99880 126 aa10.96□□□□□ -0.65
CPNE1-220ENST00000458038 HIST3H2BBQ8N257 126 aa10.95□□□□□ -0.66
CPNE1-220ENST00000458038 KRTAP9-1A8MXZ3 250 aaPredicted RBP10.94□□□□□ -0.66
CPNE1-220ENST00000458038 H0YGX0 51 aa10.94□□□□□ -0.66
CPNE1-220ENST00000458038 GHRHP01286 108 aa10.94□□□□□ -0.66
CPNE1-220ENST00000458038 NDUFV3P56181 108 aaKnown RBP10.94□□□□□ -0.66
CPNE1-220ENST00000458038 KRTAP9-7A8MTY7 169 aa10.93□□□□□ -0.66
CPNE1-220ENST00000458038 A0A087WSZ3 146 aa10.92□□□□□ -0.66
CPNE1-220ENST00000458038 COX8AP10176 69 aa10.88□□□□□ -0.67
CPNE1-220ENST00000458038 RAB37Q96AX2 223 aa10.88□□□□□ -0.67
CPNE1-220ENST00000458038 H3BMG7 143 aa10.87□□□□□ -0.67
CPNE1-220ENST00000458038 DLEU1O43261 78 aa10.87□□□□□ -0.67
CPNE1-220ENST00000458038 A0A1B0GX51 115 aa10.85□□□□□ -0.67
CPNE1-220ENST00000458038 DSCR10P59022 87 aa10.85□□□□□ -0.67
CPNE1-220ENST00000458038 LINC00313P59037 77 aa10.84□□□□□ -0.67
CPNE1-220ENST00000458038 A0A0B4J2C4 111 aa10.83□□□□□ -0.68
CPNE1-220ENST00000458038 FAM236DA0A1B0GTK5 79 aa10.83□□□□□ -0.68
CPNE1-220ENST00000458038 FAM236CP0DP71 79 aa10.83□□□□□ -0.68
CPNE1-220ENST00000458038 FAM218AQ96MZ4 157 aa10.83□□□□□ -0.68
CPNE1-220ENST00000458038 SIGMAR1Q99720 223 aa10.82□□□□□ -0.68
CPNE1-220ENST00000458038 S100A6P06703 90 aa10.81□□□□□ -0.68
CPNE1-220ENST00000458038 RBM12B-AS1Q9P1G2 102 aa10.81□□□□□ -0.68
CPNE1-220ENST00000458038 FABP2P12104 132 aa10.8□□□□□ -0.68
CPNE1-220ENST00000458038 MT2AP02795 61 aa10.79□□□□□ -0.68
CPNE1-220ENST00000458038 HIGD1BQ9P298 99 aa10.79□□□□□ -0.68
CPNE1-220ENST00000458038 A0A1W2PNM2 257 aa10.78□□□□□ -0.68
CPNE1-220ENST00000458038 USH2AO75445 5202 aa10.78□□□□□ -0.68
CPNE1-220ENST00000458038 KRTAP16-1A8MUX0 517 aa10.76□□□□□ -0.69
CPNE1-220ENST00000458038 IGKV4-1P06312 121 aa10.76□□□□□ -0.69
CPNE1-220ENST00000458038 SSPOA2VEC9 5147 aa10.76□□□□□ -0.69
CPNE1-220ENST00000458038 TRBV7-4A0A0J9YYF1 115 aa10.75□□□□□ -0.69
CPNE1-220ENST00000458038 MPLKIPQ8TAP9 179 aa10.75□□□□□ -0.69
CPNE1-220ENST00000458038 H3BQ85 93 aa10.74□□□□□ -0.69
CPNE1-220ENST00000458038 ANKRD29Q8N6D5 301 aa10.73□□□□□ -0.69
CPNE1-220ENST00000458038 PRO1854Q9UHT4 67 aa10.73□□□□□ -0.69
CPNE1-220ENST00000458038 C14orf144Q96I85 54 aa10.72□□□□□ -0.69
CPNE1-220ENST00000458038 HRES1P13985 223 aa10.71□□□□□ -0.69
CPNE1-220ENST00000458038 TMEM238LA0A1B0GVL6 79 aa10.7□□□□□ -0.7
CPNE1-220ENST00000458038 A6NJY4 79 aa10.7□□□□□ -0.7
CPNE1-220ENST00000458038 KRTAP10-10P60014 251 aa10.7□□□□□ -0.7
CPNE1-220ENST00000458038 MT1FP04733 61 aa10.69□□□□□ -0.7
CPNE1-220ENST00000458038 CEND1Q8N111 149 aa10.68□□□□□ -0.7
CPNE1-220ENST00000458038 LCE2BO14633 110 aa10.67□□□□□ -0.7
CPNE1-220ENST00000458038 KRTAP9-3Q9BYQ3 159 aa10.67□□□□□ -0.7
CPNE1-220ENST00000458038 DNAL4O96015 105 aa10.66□□□□□ -0.7
CPNE1-220ENST00000458038 NOTCH2NLQ7Z3S9 236 aa10.66□□□□□ -0.7
CPNE1-220ENST00000458038 LINC00472Q9H8W2 130 aa10.66□□□□□ -0.7
CPNE1-220ENST00000458038 ORMDL1Q9P0S3 153 aa10.66□□□□□ -0.7
CPNE1-220ENST00000458038 KRTAP19-1Q8IUB9 90 aa10.65□□□□□ -0.7
CPNE1-220ENST00000458038 MTURNQ8N3F0 131 aa10.65□□□□□ -0.7
CPNE1-220ENST00000458038 FCGBPQ9Y6R7 5405 aaPredicted RBP10.64□□□□□ -0.71
CPNE1-220ENST00000458038 TRIAP1O43715 76 aa10.64□□□□□ -0.71
CPNE1-220ENST00000458038 SPATA45Q537H7 98 aa10.64□□□□□ -0.71
CPNE1-220ENST00000458038 C2orf91Q6ZV80 131 aa10.64□□□□□ -0.71
CPNE1-220ENST00000458038 TMEM256-PLSCR3K7ERE1 68 aa10.63□□□□□ -0.71
CPNE1-220ENST00000458038 PAM16Q9Y3D7 125 aa10.63□□□□□ -0.71
CPNE1-220ENST00000458038 IGHV6-1A0A0B4J1U7 121 aa10.62□□□□□ -0.71
CPNE1-220ENST00000458038 TRACP01848 142 aa10.61□□□□□ -0.71
CPNE1-220ENST00000458038 S100A1P23297 94 aa10.61□□□□□ -0.71
CPNE1-220ENST00000458038 CCKP06307 115 aa10.6□□□□□ -0.71
CPNE1-220ENST00000458038 DEFB116Q30KQ4 102 aa10.6□□□□□ -0.71
CPNE1-220ENST00000458038 VAMP8Q9BV40 100 aa10.6□□□□□ -0.71
CPNE1-220ENST00000458038 C8orf87E5RJ46 101 aa10.59□□□□□ -0.71
CPNE1-220ENST00000458038 LINC00846Q9NV44 126 aa10.58□□□□□ -0.72
CPNE1-220ENST00000458038 COX6CP09669 75 aa10.56□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 60.4 ms