RNA–Protein interactions for RNA: ENST00000456847.7

CPSF6-203, Transcript of cleavage and polyadenylation specific factor 6, humanhuman

TSL 5 BASIC

Gene CPSF6, Length 1,915 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF6-203ENST00000456847 HIGD1BQ9P298 99 aa8.97□□□□□ -0.97
CPSF6-203ENST00000456847 XP32Q5T750 250 aa8.96□□□□□ -0.97
CPSF6-203ENST00000456847 A6NJY4 79 aa8.95□□□□□ -0.98
CPSF6-203ENST00000456847 C9orf92A6NGG3 77 aa8.93□□□□□ -0.98
CPSF6-203ENST00000456847 CFC1BP0CG36 223 aa8.93□□□□□ -0.98
CPSF6-203ENST00000456847 CFC1P0CG37 223 aa8.93□□□□□ -0.98
CPSF6-203ENST00000456847 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP8.93□□□□□ -0.98
CPSF6-203ENST00000456847 Q5XG85 94 aa8.93□□□□□ -0.98
CPSF6-203ENST00000456847 C2orf91Q6ZV80 131 aa8.93□□□□□ -0.98
CPSF6-203ENST00000456847 A0A0B4J2C4 111 aa8.92□□□□□ -0.98
CPSF6-203ENST00000456847 TCL1BO95988 128 aa8.9□□□□□ -0.98
CPSF6-203ENST00000456847 Q6JHZ5 121 aa8.9□□□□□ -0.98
CPSF6-203ENST00000456847 C1orf195Q5TG92 126 aa8.9□□□□□ -0.99
CPSF6-203ENST00000456847 CEND1Q8N111 149 aa8.9□□□□□ -0.99
CPSF6-203ENST00000456847 SNCGO76070 127 aa8.89□□□□□ -0.99
CPSF6-203ENST00000456847 PPDPFLQ8WWR9 84 aa8.89□□□□□ -0.99
CPSF6-203ENST00000456847 CLEC2BQ92478 149 aa8.89□□□□□ -0.99
CPSF6-203ENST00000456847 SNHG12Q9BXW3 62 aa8.89□□□□□ -0.99
CPSF6-203ENST00000456847 OCIAD2Q56VL3 154 aa8.88□□□□□ -0.99
CPSF6-203ENST00000456847 IGFL1Q6UW32 110 aa8.87□□□□□ -0.99
CPSF6-203ENST00000456847 IGLV8-61A0A075B6I0 122 aa8.86□□□□□ -0.99
CPSF6-203ENST00000456847 H0YGX0 51 aa8.86□□□□□ -0.99
CPSF6-203ENST00000456847 KRTAP4-1Q9BYQ7 146 aa8.86□□□□□ -0.99
CPSF6-203ENST00000456847 FAT4Q6V0I7 4981 aa8.85□□□□□ -0.99
CPSF6-203ENST00000456847 PYY3Q5JQD4 70 aa8.84□□□□□ -0.99
CPSF6-203ENST00000456847 LCE2AQ5TA79 106 aaPredicted RBP8.84□□□□□ -0.99
CPSF6-203ENST00000456847 PRO1854Q9UHT4 67 aa8.84□□□□□ -0.99
CPSF6-203ENST00000456847 TRBV7-7A0A0K0K1E9 115 aa8.84□□□□□ -1
CPSF6-203ENST00000456847 FXYD2P54710 66 aa8.84□□□□□ -1
CPSF6-203ENST00000456847 H3BUT2 72 aa8.83□□□□□ -1
CPSF6-203ENST00000456847 FAM218AQ96MZ4 157 aa8.83□□□□□ -1
CPSF6-203ENST00000456847 PCOTHQ58A44 107 aa8.82□□□□□ -1
CPSF6-203ENST00000456847 LOC105371267A0A1B0GV96 52 aa8.8□□□□□ -1
CPSF6-203ENST00000456847 HSD52Q0P140 79 aa8.8□□□□□ -1
CPSF6-203ENST00000456847 A0A1B0GX51 115 aa8.78□□□□□ -1
CPSF6-203ENST00000456847 TRIAP1O43715 76 aa8.77□□□□□ -1.01
CPSF6-203ENST00000456847 GHRHP01286 108 aa8.77□□□□□ -1.01
CPSF6-203ENST00000456847 NDUFV3P56181 108 aaKnown RBP8.77□□□□□ -1.01
CPSF6-203ENST00000456847 SMIM6P0DI80 62 aa8.76□□□□□ -1.01
CPSF6-203ENST00000456847 FABP2P12104 132 aa8.76□□□□□ -1.01
CPSF6-203ENST00000456847 PSMB2P49721 201 aa8.75□□□□□ -1.01
CPSF6-203ENST00000456847 K7ERJ3 54 aa8.74□□□□□ -1.01
CPSF6-203ENST00000456847 UQCR10Q9UDW1 63 aa8.74□□□□□ -1.01
CPSF6-203ENST00000456847 LST1O00453 97 aa8.74□□□□□ -1.01
CPSF6-203ENST00000456847 DNAL4O96015 105 aa8.73□□□□□ -1.01
CPSF6-203ENST00000456847 RPL37P61927 97 aaKnown RBP8.73□□□□□ -1.01
CPSF6-203ENST00000456847 SS18L2Q9UHA2 77 aa8.73□□□□□ -1.01
CPSF6-203ENST00000456847 H3BMG7 143 aa8.72□□□□□ -1.01
CPSF6-203ENST00000456847 TEN1Q86WV5 123 aa8.71□□□□□ -1.02
CPSF6-203ENST00000456847 COX6CP09669 75 aa8.7□□□□□ -1.02
CPSF6-203ENST00000456847 Q6Q795 121 aa8.7□□□□□ -1.02
CPSF6-203ENST00000456847 ORMDL1Q9P0S3 153 aa8.68□□□□□ -1.02
CPSF6-203ENST00000456847 A0A087WSZ3 146 aa8.67□□□□□ -1.02
CPSF6-203ENST00000456847 OBSCN-AS1Q96MR7 158 aa8.67□□□□□ -1.02
CPSF6-203ENST00000456847 A0A1B0GV72 72 aa8.66□□□□□ -1.02
CPSF6-203ENST00000456847 H3BQ85 93 aa8.65□□□□□ -1.02
CPSF6-203ENST00000456847 ANKRD29Q8N6D5 301 aa8.62□□□□□ -1.03
CPSF6-203ENST00000456847 KRTAP9-2Q9BYQ4 174 aa8.62□□□□□ -1.03
CPSF6-203ENST00000456847 TMEM256-PLSCR3K7ERE1 68 aa8.62□□□□□ -1.03
CPSF6-203ENST00000456847 A0A1W2PNM2 257 aa8.61□□□□□ -1.03
CPSF6-203ENST00000456847 SCGB1C2P0DMR2 95 aa8.61□□□□□ -1.03
CPSF6-203ENST00000456847 Q96NJ1 140 aa8.6□□□□□ -1.03
CPSF6-203ENST00000456847 LCE2CQ5TA81 110 aa8.6□□□□□ -1.03
CPSF6-203ENST00000456847 TSTD3H0UI37 97 aa8.59□□□□□ -1.03
CPSF6-203ENST00000456847 ATP11AUNQ6ZP68 121 aa8.59□□□□□ -1.03
CPSF6-203ENST00000456847 Q75L30 129 aa8.59□□□□□ -1.03
CPSF6-203ENST00000456847 SIGMAR1Q99720 223 aa8.59□□□□□ -1.03
CPSF6-203ENST00000456847 KRTAP19-2Q3LHN2 52 aa8.58□□□□□ -1.04
CPSF6-203ENST00000456847 TRACP01848 142 aa8.57□□□□□ -1.04
CPSF6-203ENST00000456847 TRBV7-4A0A0J9YYF1 115 aa8.56□□□□□ -1.04
CPSF6-203ENST00000456847 UBE2V1Q13404 147 aa8.56□□□□□ -1.04
CPSF6-203ENST00000456847 COX6B2Q6YFQ2 88 aa8.55□□□□□ -1.04
CPSF6-203ENST00000456847 CCKP06307 115 aa8.54□□□□□ -1.04
CPSF6-203ENST00000456847 M0R143 59 aa8.54□□□□□ -1.04
CPSF6-203ENST00000456847 MT1HP80294 61 aa8.53□□□□□ -1.04
CPSF6-203ENST00000456847 IGKV4-1P06312 121 aa8.52□□□□□ -1.04
CPSF6-203ENST00000456847 DSCR10P59022 87 aa8.52□□□□□ -1.04
CPSF6-203ENST00000456847 VPS25Q9BRG1 176 aa8.52□□□□□ -1.05
CPSF6-203ENST00000456847 C20orf166-AS1Q96NR2 134 aa8.5□□□□□ -1.05
CPSF6-203ENST00000456847 RBM3P98179 157 aaKnown RBP8.49□□□□□ -1.05
CPSF6-203ENST00000456847 DSCR8Q96T75 97 aa8.48□□□□□ -1.05
CPSF6-203ENST00000456847 A8MUU9 505 aa8.48□□□□□ -1.05
CPSF6-203ENST00000456847 BAALC-AS2P0C853 105 aa8.48□□□□□ -1.05
CPSF6-203ENST00000456847 NAA38Q9BRA0 125 aaKnown RBP8.48□□□□□ -1.05
CPSF6-203ENST00000456847 DEFB116Q30KQ4 102 aa8.47□□□□□ -1.05
CPSF6-203ENST00000456847 LINC00313P59037 77 aa8.46□□□□□ -1.05
CPSF6-203ENST00000456847 M0R2T5 61 aa8.45□□□□□ -1.06
CPSF6-203ENST00000456847 ATXN8Q156A1 80 aa8.45□□□□□ -1.06
CPSF6-203ENST00000456847 LINC00472Q9H8W2 130 aa8.44□□□□□ -1.06
CPSF6-203ENST00000456847 C9JAW5 83 aa8.42□□□□□ -1.06
CPSF6-203ENST00000456847 IGHV6-1A0A0B4J1U7 121 aa8.42□□□□□ -1.06
CPSF6-203ENST00000456847 PCP4L1A6NKN8 68 aa8.4□□□□□ -1.06
CPSF6-203ENST00000456847 BATFQ16520 125 aa8.39□□□□□ -1.07
CPSF6-203ENST00000456847 C21orf62-AS1Q17RA5 79 aa8.39□□□□□ -1.07
CPSF6-203ENST00000456847 LYRM7Q5U5X0 104 aa8.39□□□□□ -1.07
CPSF6-203ENST00000456847 KRTAP16-1A8MUX0 517 aa8.39□□□□□ -1.07
CPSF6-203ENST00000456847 NOTCH2NLQ7Z3S9 236 aa8.38□□□□□ -1.07
CPSF6-203ENST00000456847 JMJD7-PLA2G4BH0Y9G9 81 aa8.37□□□□□ -1.07
CPSF6-203ENST00000456847 LCE2DQ5TA82 110 aaPredicted RBP8.37□□□□□ -1.07
CPSF6-203ENST00000456847 TRBV20-1A0A075B6N2 111 aa8.37□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 36.6 ms