RNA–Protein interactions for RNA: ENST00000455727.6

LDLR-202, Transcript of low density lipoprotein receptor, humanhuman

TSL 2 BASIC

Gene LDLR, Length 2,333 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDLR-202ENST00000455727 EPM2AB3EWF7 344 aa9.39□□□□□ -0.91
LDLR-202ENST00000455727 SPRR1BP22528 89 aa9.39□□□□□ -0.91
LDLR-202ENST00000455727 IGFL1Q6UW32 110 aa9.39□□□□□ -0.91
LDLR-202ENST00000455727 H7BZZ5 65 aa9.37□□□□□ -0.91
LDLR-202ENST00000455727 FAM236DA0A1B0GTK5 79 aa9.36□□□□□ -0.91
LDLR-202ENST00000455727 FAM236CP0DP71 79 aa9.36□□□□□ -0.91
LDLR-202ENST00000455727 UBE2AP49459 152 aa9.36□□□□□ -0.91
LDLR-202ENST00000455727 STARD9Q9P2P6 4700 aa9.34□□□□□ -0.91
LDLR-202ENST00000455727 PRKDCP78527 4128 aaKnown RBP9.34□□□□□ -0.91
LDLR-202ENST00000455727 PANO1I0J062 215 aa9.34□□□□□ -0.91
LDLR-202ENST00000455727 DSCR10P59022 87 aa9.34□□□□□ -0.91
LDLR-202ENST00000455727 OCR1Q9BZK8 76 aa9.34□□□□□ -0.91
LDLR-202ENST00000455727 SPACA4Q8TDM5 124 aa9.33□□□□□ -0.92
LDLR-202ENST00000455727 SNURFQ9Y675 71 aa9.33□□□□□ -0.92
LDLR-202ENST00000455727 A0A087WTM6 91 aa9.33□□□□□ -0.92
LDLR-202ENST00000455727 KRTAP13-1Q8IUC0 172 aa9.32□□□□□ -0.92
LDLR-202ENST00000455727 A0A0G2JQZ4 141 aa9.31□□□□□ -0.92
LDLR-202ENST00000455727 NDUFC1O43677 76 aa9.3□□□□□ -0.92
LDLR-202ENST00000455727 Q6ZR54 194 aa9.3□□□□□ -0.92
LDLR-202ENST00000455727 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP9.3□□□□□ -0.92
LDLR-202ENST00000455727 TMEM254Q8TBM7 123 aa9.28□□□□□ -0.92
LDLR-202ENST00000455727 SERP1Q9Y6X1 66 aa9.28□□□□□ -0.92
LDLR-202ENST00000455727 A0A087WSZ3 146 aa9.27□□□□□ -0.92
LDLR-202ENST00000455727 K7EQZ3 153 aa9.27□□□□□ -0.92
LDLR-202ENST00000455727 C5orf47Q569G3 176 aa9.27□□□□□ -0.93
LDLR-202ENST00000455727 Q5XG85 94 aa9.27□□□□□ -0.93
LDLR-202ENST00000455727 SRRM2Q9UQ35 2752 aaKnown RBP9.25□□□□□ -0.93
LDLR-202ENST00000455727 RTL8CO15255 209 aa9.25□□□□□ -0.93
LDLR-202ENST00000455727 MEGF8Q7Z7M0 2845 aa9.24□□□□□ -0.93
LDLR-202ENST00000455727 C4orf26Q17RF5 130 aa9.23□□□□□ -0.93
LDLR-202ENST00000455727 HECTD4Q9Y4D8 3996 aa9.23□□□□□ -0.93
LDLR-202ENST00000455727 A0A0U1RQV1 116 aa9.22□□□□□ -0.93
LDLR-202ENST00000455727 LCE6AA0A183 80 aa9.22□□□□□ -0.93
LDLR-202ENST00000455727 HCG22E2RYF7 251 aa9.22□□□□□ -0.93
LDLR-202ENST00000455727 PLAC8Q9NZF1 115 aa9.21□□□□□ -0.94
LDLR-202ENST00000455727 DNAH17Q9UFH2 4485 aa9.21□□□□□ -0.94
LDLR-202ENST00000455727 FAM30AQ9NZY2 134 aa9.2□□□□□ -0.94
LDLR-202ENST00000455727 ATP5EP56381 51 aaPredicted RBP9.19□□□□□ -0.94
LDLR-202ENST00000455727 DEFB116Q30KQ4 102 aa9.19□□□□□ -0.94
LDLR-202ENST00000455727 LINC00483Q53H64 154 aa9.19□□□□□ -0.94
LDLR-202ENST00000455727 DNAH2Q9P225 4427 aa9.19□□□□□ -0.94
LDLR-202ENST00000455727 KMT2AQ03164 3969 aa9.19□□□□□ -0.94
LDLR-202ENST00000455727 C1orf134Q5TEV5 83 aa9.19□□□□□ -0.94
LDLR-202ENST00000455727 LINC00472Q9H8W2 130 aa9.18□□□□□ -0.94
LDLR-202ENST00000455727 IGLV5-52A0A0A0MRZ9 124 aa9.17□□□□□ -0.94
LDLR-202ENST00000455727 RPL37AP61513 92 aaKnown RBP9.17□□□□□ -0.94
LDLR-202ENST00000455727 HRCT1Q6UXD1 115 aa9.17□□□□□ -0.94
LDLR-202ENST00000455727 ZNF706Q9Y5V0 76 aaPredicted RBP9.17□□□□□ -0.94
LDLR-202ENST00000455727 PSORS1C2Q9UIG4 136 aa9.16□□□□□ -0.94
LDLR-202ENST00000455727 SMIM26A0A096LP01 95 aa9.14□□□□□ -0.95
LDLR-202ENST00000455727 A8MWP4 228 aa9.14□□□□□ -0.95
LDLR-202ENST00000455727 PRR15Q8IV56 129 aa9.14□□□□□ -0.95
LDLR-202ENST00000455727 DNHD1Q96M86 4753 aa9.13□□□□□ -0.95
LDLR-202ENST00000455727 ZNF861PO60384 105 aa9.13□□□□□ -0.95
LDLR-202ENST00000455727 KRTAP29-1A8MX34 341 aaPredicted RBP9.12□□□□□ -0.95
LDLR-202ENST00000455727 DNAH6Q9C0G6 4158 aa9.11□□□□□ -0.95
LDLR-202ENST00000455727 IGLV9-49A0A0B4J1Y8 123 aa9.11□□□□□ -0.95
LDLR-202ENST00000455727 ZCCHC13Q8WW36 166 aaKnown RBP9.1□□□□□ -0.95
LDLR-202ENST00000455727 FBN3Q75N90 2809 aa9.1□□□□□ -0.95
LDLR-202ENST00000455727 LY6G6CO95867 125 aa9.1□□□□□ -0.95
LDLR-202ENST00000455727 WFDC13Q8IUB5 93 aa9.1□□□□□ -0.95
LDLR-202ENST00000455727 WWC2-AS2Q96NR7 200 aa9.1□□□□□ -0.95
LDLR-202ENST00000455727 FP248Q71RG6 208 aaPredicted RBP9.09□□□□□ -0.95
LDLR-202ENST00000455727 DNAH8Q96JB1 4490 aa9.09□□□□□ -0.95
LDLR-202ENST00000455727 TGP01266 2768 aa9.08□□□□□ -0.96
LDLR-202ENST00000455727 CASC2Q6XLA1 102 aa9.07□□□□□ -0.96
LDLR-202ENST00000455727 Q96NJ1 140 aa9.05□□□□□ -0.96
LDLR-202ENST00000455727 NDUFB1O75438 58 aa9.04□□□□□ -0.96
LDLR-202ENST00000455727 IGLV7-43P04211 117 aa9.03□□□□□ -0.96
LDLR-202ENST00000455727 MOBPQ13875 183 aa9.03□□□□□ -0.96
LDLR-202ENST00000455727 MP68P56378 58 aa9.02□□□□□ -0.97
LDLR-202ENST00000455727 FRAS1Q86XX4 4008 aa9.01□□□□□ -0.97
LDLR-202ENST00000455727 MMP24-AS1A0A0U1RRL7 71 aa9□□□□□ -0.97
LDLR-202ENST00000455727 H3BPC8 53 aa8.99□□□□□ -0.97
LDLR-202ENST00000455727 FAM229BQ4G0N7 80 aa8.99□□□□□ -0.97
LDLR-202ENST00000455727 ANAPC11Q9NYG5 84 aa8.99□□□□□ -0.97
LDLR-202ENST00000455727 ASB16-AS1Q495Z4 193 aa8.98□□□□□ -0.97
LDLR-202ENST00000455727 KRTAP10-2P60368 255 aa8.97□□□□□ -0.97
LDLR-202ENST00000455727 hDV103S1A0JD37 113 aa8.97□□□□□ -0.97
LDLR-202ENST00000455727 KRTAP21-3Q3LHN1 58 aa8.97□□□□□ -0.97
LDLR-202ENST00000455727 LINC00336Q6ZUF6 198 aa8.97□□□□□ -0.97
LDLR-202ENST00000455727 CIRBP-AS1Q8TBR5 109 aa8.97□□□□□ -0.97
LDLR-202ENST00000455727 ALMS1Q8TCU4 4167 aa8.96□□□□□ -0.98
LDLR-202ENST00000455727 DNAH11Q96DT5 4516 aa8.96□□□□□ -0.98
LDLR-202ENST00000455727 DNAH5Q8TE73 4624 aa8.95□□□□□ -0.98
LDLR-202ENST00000455727 H0Y9P7 68 aa8.94□□□□□ -0.98
LDLR-202ENST00000455727 TRAV22A0A0B4J277 110 aa8.94□□□□□ -0.98
LDLR-202ENST00000455727 LINC00208Q96KT6 92 aa8.94□□□□□ -0.98
LDLR-202ENST00000455727 Q6ZSA8 131 aa8.93□□□□□ -0.98
LDLR-202ENST00000455727 A0A1B0GVX0 72 aa8.93□□□□□ -0.98
LDLR-202ENST00000455727 C8orf17Q9NRJ1 99 aa8.93□□□□□ -0.98
LDLR-202ENST00000455727 CD164Q04900 197 aa8.92□□□□□ -0.98
LDLR-202ENST00000455727 MPLKIPQ8TAP9 179 aa8.92□□□□□ -0.98
LDLR-202ENST00000455727 CYP4F30PQ9H0H9 118 aa8.92□□□□□ -0.98
LDLR-202ENST00000455727 SSBP3-AS1Q7Z2R9 100 aa8.91□□□□□ -0.98
LDLR-202ENST00000455727 TP53AIP1Q9HCN2 124 aa8.91□□□□□ -0.98
LDLR-202ENST00000455727 PRO0628Q9UI54 55 aa8.91□□□□□ -0.98
LDLR-202ENST00000455727 CDK2AP2O75956 126 aa8.91□□□□□ -0.98
LDLR-202ENST00000455727 C1orf64Q8NEQ6 169 aa8.88□□□□□ -0.99
LDLR-202ENST00000455727 PKD1P98161 4303 aa8.88□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 85.7 ms