RNA–Protein interactions for RNA: ENST00000455383.5

MSH6-206, Transcript of mutS homolog 6, humanhuman

TSL 5

Gene MSH6, Length 578 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH6-206ENST00000455383 C3orf79P0CE67 100 aa9.54□□□□□ -0.88
MSH6-206ENST00000455383 HIST1H2BKO60814 126 aa9.53□□□□□ -0.88
MSH6-206ENST00000455383 HIST1H2BJP06899 126 aa9.53□□□□□ -0.88
MSH6-206ENST00000455383 HIST1H2BOP23527 126 aa9.53□□□□□ -0.88
MSH6-206ENST00000455383 HIST1H2BBP33778 126 aa9.53□□□□□ -0.88
MSH6-206ENST00000455383 HIST1H2BDP58876 126 aa9.53□□□□□ -0.88
MSH6-206ENST00000455383 HIST1H2BCP62807 126 aa9.53□□□□□ -0.88
MSH6-206ENST00000455383 HIST2H2BEQ16778 126 aa9.53□□□□□ -0.88
MSH6-206ENST00000455383 HIST2H2BFQ5QNW6 126 aaPredicted RBP9.53□□□□□ -0.88
MSH6-206ENST00000455383 LINC00575Q6W349 94 aa9.53□□□□□ -0.88
MSH6-206ENST00000455383 HIST1H2BHQ93079 126 aa9.53□□□□□ -0.88
MSH6-206ENST00000455383 HIST1H2BNQ99877 126 aa9.53□□□□□ -0.88
MSH6-206ENST00000455383 HIST1H2BMQ99879 126 aa9.53□□□□□ -0.88
MSH6-206ENST00000455383 FCGBPQ9Y6R7 5405 aaPredicted RBP9.53□□□□□ -0.88
MSH6-206ENST00000455383 ANKRD39Q53RE8 183 aa9.52□□□□□ -0.89
MSH6-206ENST00000455383 OCIAD2Q56VL3 154 aa9.5□□□□□ -0.89
MSH6-206ENST00000455383 Q6ZQY7 126 aa9.5□□□□□ -0.89
MSH6-206ENST00000455383 Q96NJ1 140 aa9.49□□□□□ -0.89
MSH6-206ENST00000455383 C20orf166-AS1Q96NR2 134 aa9.49□□□□□ -0.89
MSH6-206ENST00000455383 VAMP3Q15836 100 aa9.48□□□□□ -0.89
MSH6-206ENST00000455383 hADV29S1A0JD25 119 aa9.47□□□□□ -0.89
MSH6-206ENST00000455383 MT2AP02795 61 aa9.47□□□□□ -0.89
MSH6-206ENST00000455383 SLC7A5P1Q8MH63 180 aa9.47□□□□□ -0.89
MSH6-206ENST00000455383 A8MUU9 505 aa9.46□□□□□ -0.9
MSH6-206ENST00000455383 LST1O00453 97 aa9.45□□□□□ -0.9
MSH6-206ENST00000455383 KRTDAPP60985 99 aa9.44□□□□□ -0.9
MSH6-206ENST00000455383 KRTAP19-1Q8IUB9 90 aa9.44□□□□□ -0.9
MSH6-206ENST00000455383 TRBV20-1A0A075B6N2 111 aa9.43□□□□□ -0.9
MSH6-206ENST00000455383 LCE2BO14633 110 aa9.43□□□□□ -0.9
MSH6-206ENST00000455383 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP9.42□□□□□ -0.9
MSH6-206ENST00000455383 PPDPFLQ8WWR9 84 aa9.41□□□□□ -0.9
MSH6-206ENST00000455383 MT1FP04733 61 aa9.4□□□□□ -0.9
MSH6-206ENST00000455383 COA6Q5JTJ3 125 aaKnown RBP9.4□□□□□ -0.9
MSH6-206ENST00000455383 ATOH7Q8N100 152 aa9.39□□□□□ -0.91
MSH6-206ENST00000455383 KRTAP9-3Q9BYQ3 159 aa9.38□□□□□ -0.91
MSH6-206ENST00000455383 H3BUT2 72 aa9.37□□□□□ -0.91
MSH6-206ENST00000455383 MACF1Q9UPN3 7388 aaKnown RBP9.36□□□□□ -0.91
MSH6-206ENST00000455383 SCGB1D1O95968 90 aa9.36□□□□□ -0.91
MSH6-206ENST00000455383 SS18L2Q9UHA2 77 aa9.36□□□□□ -0.91
MSH6-206ENST00000455383 SNHG12Q9BXW3 62 aa9.35□□□□□ -0.91
MSH6-206ENST00000455383 SYNE2Q8WXH0 6885 aaKnown RBP9.34□□□□□ -0.91
MSH6-206ENST00000455383 KRTAP16-1A8MUX0 517 aa9.33□□□□□ -0.92
MSH6-206ENST00000455383 SNRPEP62304 92 aaKnown RBP9.32□□□□□ -0.92
MSH6-206ENST00000455383 MPLKIPQ8TAP9 179 aa9.31□□□□□ -0.92
MSH6-206ENST00000455383 BVES-AS1Q5T3Y7 98 aa9.3□□□□□ -0.92
MSH6-206ENST00000455383 TEN1Q86WV5 123 aa9.3□□□□□ -0.92
MSH6-206ENST00000455383 DSCR10P59022 87 aa9.28□□□□□ -0.92
MSH6-206ENST00000455383 KRTAP10-10P60014 251 aa9.28□□□□□ -0.92
MSH6-206ENST00000455383 FAM236DA0A1B0GTK5 79 aa9.27□□□□□ -0.93
MSH6-206ENST00000455383 FAM236CP0DP71 79 aa9.27□□□□□ -0.93
MSH6-206ENST00000455383 A0A087WSZ3 146 aa9.26□□□□□ -0.93
MSH6-206ENST00000455383 HRES1P13985 223 aa9.26□□□□□ -0.93
MSH6-206ENST00000455383 RBM12B-AS1Q9P1G2 102 aa9.22□□□□□ -0.93
MSH6-206ENST00000455383 NDUFV3P56181 108 aaKnown RBP9.21□□□□□ -0.94
MSH6-206ENST00000455383 C12orf57Q99622 126 aa9.21□□□□□ -0.94
MSH6-206ENST00000455383 LINC00313P59037 77 aa9.19□□□□□ -0.94
MSH6-206ENST00000455383 KRTAP19-6Q3LI70 58 aa9.18□□□□□ -0.94
MSH6-206ENST00000455383 NOTCH2NLQ7Z3S9 236 aa9.18□□□□□ -0.94
MSH6-206ENST00000455383 FAM218AQ96MZ4 157 aa9.16□□□□□ -0.94
MSH6-206ENST00000455383 SIGMAR1Q99720 223 aa9.16□□□□□ -0.94
MSH6-206ENST00000455383 A0A1W2PNM2 257 aa9.15□□□□□ -0.94
MSH6-206ENST00000455383 LINC00846Q9NV44 126 aa9.15□□□□□ -0.94
MSH6-206ENST00000455383 HSBP1L1C9JCN9 74 aa9.14□□□□□ -0.95
MSH6-206ENST00000455383 H3BMG7 143 aa9.14□□□□□ -0.95
MSH6-206ENST00000455383 H0YGX0 51 aa9.13□□□□□ -0.95
MSH6-206ENST00000455383 HIST1H4GQ99525 98 aa9.13□□□□□ -0.95
MSH6-206ENST00000455383 SNCGO76070 127 aa9.12□□□□□ -0.95
MSH6-206ENST00000455383 IGKV4-1P06312 121 aa9.1□□□□□ -0.95
MSH6-206ENST00000455383 HIST1H2BLQ99880 126 aa9.09□□□□□ -0.95
MSH6-206ENST00000455383 HIST3H2BBQ8N257 126 aa9.08□□□□□ -0.96
MSH6-206ENST00000455383 GHRHP01286 108 aa9.07□□□□□ -0.96
MSH6-206ENST00000455383 A0A1B0GX51 115 aa9.06□□□□□ -0.96
MSH6-206ENST00000455383 A0A0B4J2C4 111 aa9.05□□□□□ -0.96
MSH6-206ENST00000455383 TRBV7-4A0A0J9YYF1 115 aa9.05□□□□□ -0.96
MSH6-206ENST00000455383 FABP2P12104 132 aa9.05□□□□□ -0.96
MSH6-206ENST00000455383 LINC00472Q9H8W2 130 aa9.05□□□□□ -0.96
MSH6-206ENST00000455383 COX8AP10176 69 aa9.04□□□□□ -0.96
MSH6-206ENST00000455383 RAB37Q96AX2 223 aa9.04□□□□□ -0.96
MSH6-206ENST00000455383 DLEU1O43261 78 aa9.03□□□□□ -0.96
MSH6-206ENST00000455383 MTURNQ8N3F0 131 aa9.03□□□□□ -0.96
MSH6-206ENST00000455383 KRTAP6-3Q3LI67 103 aa9.02□□□□□ -0.97
MSH6-206ENST00000455383 DEFB116Q30KQ4 102 aa9.01□□□□□ -0.97
MSH6-206ENST00000455383 S100A2P29034 98 aa9□□□□□ -0.97
MSH6-206ENST00000455383 ANKRD29Q8N6D5 301 aa9□□□□□ -0.97
MSH6-206ENST00000455383 IGHV6-1A0A0B4J1U7 121 aa8.99□□□□□ -0.97
MSH6-206ENST00000455383 A8MWP4 228 aa8.97□□□□□ -0.97
MSH6-206ENST00000455383 HIGD1BQ9P298 99 aa8.96□□□□□ -0.98
MSH6-206ENST00000455383 C8orf87E5RJ46 101 aa8.95□□□□□ -0.98
MSH6-206ENST00000455383 SPINK7P58062 85 aa8.95□□□□□ -0.98
MSH6-206ENST00000455383 ZCCHC13Q8WW36 166 aaKnown RBP8.95□□□□□ -0.98
MSH6-206ENST00000455383 A0A1B0GVX0 72 aa8.92□□□□□ -0.98
MSH6-206ENST00000455383 PRO1854Q9UHT4 67 aa8.92□□□□□ -0.98
MSH6-206ENST00000455383 CCKP06307 115 aa8.91□□□□□ -0.98
MSH6-206ENST00000455383 A0A1B0GV72 72 aa8.9□□□□□ -0.98
MSH6-206ENST00000455383 H3BQ85 93 aa8.9□□□□□ -0.98
MSH6-206ENST00000455383 TRIAP1O43715 76 aa8.9□□□□□ -0.98
MSH6-206ENST00000455383 TRACP01848 142 aa8.9□□□□□ -0.98
MSH6-206ENST00000455383 C14orf144Q96I85 54 aa8.9□□□□□ -0.98
MSH6-206ENST00000455383 ORMDL1Q9P0S3 153 aa8.9□□□□□ -0.98
MSH6-206ENST00000455383 C2orf91Q6ZV80 131 aa8.89□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 47.9 ms