RNA–Protein interactions for RNA: ENST00000453744.6

UBE2D3-210, Transcript of ubiquitin conjugating enzyme E2 D3, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene UBE2D3, Length 3,990 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D3-210ENST00000453744 KRTAP26-1Q6PEX3 210 aa8.9□□□□□ -0.98
UBE2D3-210ENST00000453744 ZNF469Q96JG9 3925 aaPredicted RBP8.89□□□□□ -0.99
UBE2D3-210ENST00000453744 IGLV9-49A0A0B4J1Y8 123 aa8.88□□□□□ -0.99
UBE2D3-210ENST00000453744 LINC00588Q9Y4M8 146 aa8.88□□□□□ -0.99
UBE2D3-210ENST00000453744 H3BNG1 76 aa8.87□□□□□ -0.99
UBE2D3-210ENST00000453744 TENM4Q6N022 2769 aa8.87□□□□□ -0.99
UBE2D3-210ENST00000453744 TENM3Q9P273 2699 aa8.87□□□□□ -0.99
UBE2D3-210ENST00000453744 A0A1B0GW54 56 aa8.87□□□□□ -0.99
UBE2D3-210ENST00000453744 CHTF8P0CG12 524 aa8.86□□□□□ -0.99
UBE2D3-210ENST00000453744 F8WDY8 70 aa8.86□□□□□ -0.99
UBE2D3-210ENST00000453744 KRTAP10-11P60412 298 aa8.85□□□□□ -0.99
UBE2D3-210ENST00000453744 AKAP9Q99996 3911 aa8.84□□□□□ -0.99
UBE2D3-210ENST00000453744 PHF5AQ7RTV0 110 aaKnown RBP8.84□□□□□ -0.99
UBE2D3-210ENST00000453744 STAB2Q8WWQ8 2551 aa8.84□□□□□ -0.99
UBE2D3-210ENST00000453744 DNAH10OSP0CZ25 163 aa8.83□□□□□ -1
UBE2D3-210ENST00000453744 SPRR4Q96PI1 79 aa8.83□□□□□ -1
UBE2D3-210ENST00000453744 SPINK6Q6UWN8 80 aa8.8□□□□□ -1
UBE2D3-210ENST00000453744 Q1T7F1 81 aa8.8□□□□□ -1
UBE2D3-210ENST00000453744 SPAG11AQ6PDA7 123 aa8.8□□□□□ -1
UBE2D3-210ENST00000453744 IGHV6-1A0A0B4J1U7 121 aa8.79□□□□□ -1
UBE2D3-210ENST00000453744 TLX1NBP0CAT3 122 aa8.78□□□□□ -1
UBE2D3-210ENST00000453744 TNP2Q05952 138 aa8.78□□□□□ -1
UBE2D3-210ENST00000453744 LIMD2Q9BT23 127 aa8.77□□□□□ -1.01
UBE2D3-210ENST00000453744 A8MU10 97 aa8.77□□□□□ -1.01
UBE2D3-210ENST00000453744 KRTAP24-1Q3LI83 254 aa8.76□□□□□ -1.01
UBE2D3-210ENST00000453744 PRR15Q8IV56 129 aa8.76□□□□□ -1.01
UBE2D3-210ENST00000453744 SPRR1AP35321 89 aa8.76□□□□□ -1.01
UBE2D3-210ENST00000453744 PLA2G2DQ9UNK4 145 aa8.76□□□□□ -1.01
UBE2D3-210ENST00000453744 COA5Q86WW8 74 aa8.75□□□□□ -1.01
UBE2D3-210ENST00000453744 KRTAP4-16G5E9R7 235 aaPredicted RBP8.74□□□□□ -1.01
UBE2D3-210ENST00000453744 OTOGQ6ZRI0 2925 aa8.74□□□□□ -1.01
UBE2D3-210ENST00000453744 CYP4F30PQ9H0H9 118 aa8.73□□□□□ -1.01
UBE2D3-210ENST00000453744 TRRAPQ9Y4A5 3859 aa8.73□□□□□ -1.01
UBE2D3-210ENST00000453744 A8MWP4 228 aa8.73□□□□□ -1.01
UBE2D3-210ENST00000453744 ZCCHC13Q8WW36 166 aaKnown RBP8.73□□□□□ -1.01
UBE2D3-210ENST00000453744 FBN1P35555 2871 aaKnown RBP8.72□□□□□ -1.01
UBE2D3-210ENST00000453744 KRTAP7-1Q8IUC3 87 aa8.72□□□□□ -1.01
UBE2D3-210ENST00000453744 C16orf90A8MZG2 172 aa8.71□□□□□ -1.01
UBE2D3-210ENST00000453744 IGLV5-37A0A075B6J1 123 aa8.7□□□□□ -1.02
UBE2D3-210ENST00000453744 CNBPP62633 177 aaKnown RBP8.69□□□□□ -1.02
UBE2D3-210ENST00000453744 Q5VV11 94 aa8.69□□□□□ -1.02
UBE2D3-210ENST00000453744 Q8N9P0 234 aaPredicted RBP8.68□□□□□ -1.02
UBE2D3-210ENST00000453744 C14orf177Q52M58 125 aa8.67□□□□□ -1.02
UBE2D3-210ENST00000453744 RETNLBQ9BQ08 111 aa8.66□□□□□ -1.02
UBE2D3-210ENST00000453744 H3BPC8 53 aa8.66□□□□□ -1.02
UBE2D3-210ENST00000453744 LCE6AA0A183 80 aa8.64□□□□□ -1.03
UBE2D3-210ENST00000453744 SRRM2Q9UQ35 2752 aaKnown RBP8.64□□□□□ -1.03
UBE2D3-210ENST00000453744 LY6G6CO95867 125 aa8.63□□□□□ -1.03
UBE2D3-210ENST00000453744 ANAPC11Q9NYG5 84 aa8.63□□□□□ -1.03
UBE2D3-210ENST00000453744 MOBPQ13875 183 aa8.62□□□□□ -1.03
UBE2D3-210ENST00000453744 SPANXA2-OT1Q8N9U9 137 aa8.62□□□□□ -1.03
UBE2D3-210ENST00000453744 LOC101927531A0A1B0GV80 90 aa8.6□□□□□ -1.03
UBE2D3-210ENST00000453744 KRTAP29-1A8MX34 341 aaPredicted RBP8.58□□□□□ -1.04
UBE2D3-210ENST00000453744 CIRBP-AS1Q8TBR5 109 aa8.57□□□□□ -1.04
UBE2D3-210ENST00000453744 KRTAP1-5Q9BYS1 174 aa8.57□□□□□ -1.04
UBE2D3-210ENST00000453744 LINC00472Q9H8W2 130 aa8.57□□□□□ -1.04
UBE2D3-210ENST00000453744 C8orf17Q9NRJ1 99 aa8.57□□□□□ -1.04
UBE2D3-210ENST00000453744 KRTAP11-1Q8IUC1 163 aa8.57□□□□□ -1.04
UBE2D3-210ENST00000453744 MMP24-AS1A0A0U1RRL7 71 aa8.56□□□□□ -1.04
UBE2D3-210ENST00000453744 CD164Q04900 197 aa8.56□□□□□ -1.04
UBE2D3-210ENST00000453744 ANK3Q12955 4377 aaKnown RBP8.56□□□□□ -1.04
UBE2D3-210ENST00000453744 TP53AIP1Q9HCN2 124 aa8.56□□□□□ -1.04
UBE2D3-210ENST00000453744 KTN1-AS1Q86SY8 53 aa8.56□□□□□ -1.04
UBE2D3-210ENST00000453744 PRR26Q8N8Z3 221 aa8.55□□□□□ -1.04
UBE2D3-210ENST00000453744 ATP11AUNQ6ZP68 121 aa8.55□□□□□ -1.04
UBE2D3-210ENST00000453744 IGLV7-46A0A075B6I9 117 aa8.53□□□□□ -1.04
UBE2D3-210ENST00000453744 LCA10Q71F78 164 aa8.52□□□□□ -1.05
UBE2D3-210ENST00000453744 IGLV8-61A0A075B6I0 122 aa8.52□□□□□ -1.05
UBE2D3-210ENST00000453744 MRPL34Q9BQ48 92 aaKnown RBP8.51□□□□□ -1.05
UBE2D3-210ENST00000453744 TENM2Q9NT68 2774 aa8.5□□□□□ -1.05
UBE2D3-210ENST00000453744 K7EIL1 84 aa8.5□□□□□ -1.05
UBE2D3-210ENST00000453744 RBM12B-AS1Q9P1G2 102 aa8.5□□□□□ -1.05
UBE2D3-210ENST00000453744 DMBT1Q9UGM3 2413 aaPredicted RBP8.49□□□□□ -1.05
UBE2D3-210ENST00000453744 C9orf163Q8N9P6 203 aa8.49□□□□□ -1.05
UBE2D3-210ENST00000453744 A0A1B0GVX0 72 aa8.49□□□□□ -1.05
UBE2D3-210ENST00000453744 Q75L30 129 aa8.49□□□□□ -1.05
UBE2D3-210ENST00000453744 ZNF706Q9Y5V0 76 aaPredicted RBP8.48□□□□□ -1.05
UBE2D3-210ENST00000453744 SPINK7P58062 85 aa8.48□□□□□ -1.05
UBE2D3-210ENST00000453744 MDFIQ99750 246 aa8.48□□□□□ -1.05
UBE2D3-210ENST00000453744 CDC42SE1Q9NRR8 79 aa8.48□□□□□ -1.05
UBE2D3-210ENST00000453744 PANO1I0J062 215 aa8.46□□□□□ -1.06
UBE2D3-210ENST00000453744 HRES1P13985 223 aa8.45□□□□□ -1.06
UBE2D3-210ENST00000453744 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP8.43□□□□□ -1.06
UBE2D3-210ENST00000453744 CSMD3Q7Z407 3707 aa8.42□□□□□ -1.06
UBE2D3-210ENST00000453744 NBDYA0A0U1RRE5 68 aa8.42□□□□□ -1.06
UBE2D3-210ENST00000453744 SPRR1BP22528 89 aa8.42□□□□□ -1.06
UBE2D3-210ENST00000453744 SPINK1P00995 79 aa8.41□□□□□ -1.06
UBE2D3-210ENST00000453744 ACYP2P14621 99 aa8.41□□□□□ -1.06
UBE2D3-210ENST00000453744 C7orf65Q6ZTY9 151 aa8.41□□□□□ -1.06
UBE2D3-210ENST00000453744 A0A087X002 238 aa8.41□□□□□ -1.06
UBE2D3-210ENST00000453744 A0A1B0GU69 56 aa8.41□□□□□ -1.06
UBE2D3-210ENST00000453744 NOTCH2NLQ7Z3S9 236 aa8.41□□□□□ -1.06
UBE2D3-210ENST00000453744 LINC01558Q9Y6Z2 57 aa8.4□□□□□ -1.06
UBE2D3-210ENST00000453744 COL7A1Q02388 2944 aa8.4□□□□□ -1.07
UBE2D3-210ENST00000453744 IGKV2D-30A0A075B6S6 120 aa8.39□□□□□ -1.07
UBE2D3-210ENST00000453744 IGKV2-30P06310 120 aa8.39□□□□□ -1.07
UBE2D3-210ENST00000453744 PSORS1C2Q9UIG4 136 aa8.39□□□□□ -1.07
UBE2D3-210ENST00000453744 PRAC1Q96KF2 57 aa8.38□□□□□ -1.07
UBE2D3-210ENST00000453744 APLNQ9ULZ1 77 aa8.34□□□□□ -1.07
UBE2D3-210ENST00000453744 RTL8CO15255 209 aa8.34□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 84.9 ms