RNA–Protein interactions for RNA: ENST00000450931.5

PMS1-217, Transcript of PMS1 homolog 1, mismatch repair system component, humanhuman

TSL 2

Gene PMS1, Length 2,817 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PMS1-217ENST00000450931 LINC00310P59036 64 aa3.31□□□□□ -1.88
PMS1-217ENST00000450931 KRTAP6-3Q3LI67 103 aa3.31□□□□□ -1.88
PMS1-217ENST00000450931 PMCHL2Q9BQD1 86 aa3.31□□□□□ -1.88
PMS1-217ENST00000450931 SYNE2Q8WXH0 6885 aaKnown RBP3.31□□□□□ -1.88
PMS1-217ENST00000450931 IFITM1P13164 125 aa3.3□□□□□ -1.88
PMS1-217ENST00000450931 IGFL1Q6UW32 110 aa3.3□□□□□ -1.88
PMS1-217ENST00000450931 Q96NJ1 140 aa3.3□□□□□ -1.88
PMS1-217ENST00000450931 KRTAP10-10P60014 251 aa3.3□□□□□ -1.88
PMS1-217ENST00000450931 Q6ZVH6 145 aa3.3□□□□□ -1.88
PMS1-217ENST00000450931 LST1O00453 97 aa3.29□□□□□ -1.88
PMS1-217ENST00000450931 APOC3P02656 99 aa3.29□□□□□ -1.88
PMS1-217ENST00000450931 PPDPFLQ8WWR9 84 aa3.29□□□□□ -1.88
PMS1-217ENST00000450931 SS18L2Q9UHA2 77 aa3.29□□□□□ -1.88
PMS1-217ENST00000450931 FABP4P15090 132 aa3.29□□□□□ -1.88
PMS1-217ENST00000450931 FAM236DA0A1B0GTK5 79 aa3.28□□□□□ -1.88
PMS1-217ENST00000450931 A6NDN8 102 aa3.28□□□□□ -1.88
PMS1-217ENST00000450931 SCGB1D1O95968 90 aa3.28□□□□□ -1.88
PMS1-217ENST00000450931 FAM236CP0DP71 79 aa3.28□□□□□ -1.88
PMS1-217ENST00000450931 MPLKIPQ8TAP9 179 aa3.28□□□□□ -1.88
PMS1-217ENST00000450931 RBM12B-AS1Q9P1G2 102 aa3.28□□□□□ -1.88
PMS1-217ENST00000450931 OCIAD2Q56VL3 154 aa3.27□□□□□ -1.89
PMS1-217ENST00000450931 VAMP3Q15836 100 aa3.27□□□□□ -1.89
PMS1-217ENST00000450931 SYS1-DBNDD2H3BUS1 97 aa3.26□□□□□ -1.89
PMS1-217ENST00000450931 TRGC2P03986 189 aa3.26□□□□□ -1.89
PMS1-217ENST00000450931 LINC01545Q5VT33 79 aa3.26□□□□□ -1.89
PMS1-217ENST00000450931 LINC00575Q6W349 94 aa3.26□□□□□ -1.89
PMS1-217ENST00000450931 SMIM11BQ8TCY0 68 aa3.26□□□□□ -1.89
PMS1-217ENST00000450931 PET117Q6UWS5 81 aa3.25□□□□□ -1.89
PMS1-217ENST00000450931 HRES1P13985 223 aa3.25□□□□□ -1.89
PMS1-217ENST00000450931 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP3.25□□□□□ -1.89
PMS1-217ENST00000450931 SCGB1D4Q6XE38 83 aa3.25□□□□□ -1.89
PMS1-217ENST00000450931 Q6ZQY7 126 aa3.25□□□□□ -1.89
PMS1-217ENST00000450931 SLC7A5P1Q8MH63 180 aa3.25□□□□□ -1.89
PMS1-217ENST00000450931 hADV29S1A0JD25 119 aa3.25□□□□□ -1.89
PMS1-217ENST00000450931 MUSTN1Q8IVN3 82 aa3.23□□□□□ -1.89
PMS1-217ENST00000450931 MTURNQ8N3F0 131 aa3.23□□□□□ -1.89
PMS1-217ENST00000450931 TTTY13Q9BZ97 58 aa3.23□□□□□ -1.89
PMS1-217ENST00000450931 ANKRD39Q53RE8 183 aa3.22□□□□□ -1.89
PMS1-217ENST00000450931 TEN1Q86WV5 123 aa3.22□□□□□ -1.89
PMS1-217ENST00000450931 A8MWP4 228 aa3.21□□□□□ -1.9
PMS1-217ENST00000450931 NEBP20929 6669 aa3.21□□□□□ -1.9
PMS1-217ENST00000450931 SNHG12Q9BXW3 62 aa3.21□□□□□ -1.9
PMS1-217ENST00000450931 KRTAP16-1A8MUX0 517 aa3.2□□□□□ -1.9
PMS1-217ENST00000450931 DSCR10P59022 87 aa3.2□□□□□ -1.9
PMS1-217ENST00000450931 BVES-AS1Q5T3Y7 98 aa3.2□□□□□ -1.9
PMS1-217ENST00000450931 NOTCH2NLQ7Z3S9 236 aa3.2□□□□□ -1.9
PMS1-217ENST00000450931 LINC00313P59037 77 aa3.19□□□□□ -1.9
PMS1-217ENST00000450931 H3BUT2 72 aa3.19□□□□□ -1.9
PMS1-217ENST00000450931 A0A087WSZ3 146 aa3.18□□□□□ -1.9
PMS1-217ENST00000450931 C3orf79P0CE67 100 aa3.18□□□□□ -1.9
PMS1-217ENST00000450931 SNRPEP62304 92 aaKnown RBP3.18□□□□□ -1.9
PMS1-217ENST00000450931 C12orf57Q99622 126 aa3.18□□□□□ -1.9
PMS1-217ENST00000450931 SIGMAR1Q99720 223 aa3.18□□□□□ -1.9
PMS1-217ENST00000450931 COLCA2A8K830 154 aa3.17□□□□□ -1.9
PMS1-217ENST00000450931 KRTAP20-1Q3LI63 56 aa3.17□□□□□ -1.9
PMS1-217ENST00000450931 GHRHP01286 108 aa3.17□□□□□ -1.9
PMS1-217ENST00000450931 SNCGO76070 127 aa3.16□□□□□ -1.9
PMS1-217ENST00000450931 NDUFV3P56181 108 aaKnown RBP3.16□□□□□ -1.9
PMS1-217ENST00000450931 KRTAP4-8Q9BYQ9 185 aa3.16□□□□□ -1.9
PMS1-217ENST00000450931 HIST1H2BKO60814 126 aa3.15□□□□□ -1.9
PMS1-217ENST00000450931 HIST1H2BJP06899 126 aa3.15□□□□□ -1.9
PMS1-217ENST00000450931 HIST1H2BOP23527 126 aa3.15□□□□□ -1.9
PMS1-217ENST00000450931 HIST1H2BBP33778 126 aa3.15□□□□□ -1.9
PMS1-217ENST00000450931 HIST1H2BDP58876 126 aa3.15□□□□□ -1.9
PMS1-217ENST00000450931 HIST1H2BCP62807 126 aa3.15□□□□□ -1.9
PMS1-217ENST00000450931 HIST2H2BEQ16778 126 aa3.15□□□□□ -1.9
PMS1-217ENST00000450931 HIST2H2BFQ5QNW6 126 aaPredicted RBP3.15□□□□□ -1.9
PMS1-217ENST00000450931 HIST1H2BHQ93079 126 aa3.15□□□□□ -1.9
PMS1-217ENST00000450931 HIST1H2BNQ99877 126 aa3.15□□□□□ -1.9
PMS1-217ENST00000450931 HIST1H2BMQ99879 126 aa3.15□□□□□ -1.9
PMS1-217ENST00000450931 KRTDAPP60985 99 aa3.15□□□□□ -1.91
PMS1-217ENST00000450931 C8orf87E5RJ46 101 aa3.14□□□□□ -1.91
PMS1-217ENST00000450931 IGKV4-1P06312 121 aa3.14□□□□□ -1.91
PMS1-217ENST00000450931 COA6Q5JTJ3 125 aaKnown RBP3.14□□□□□ -1.91
PMS1-217ENST00000450931 TRBV7-4A0A0J9YYF1 115 aa3.13□□□□□ -1.91
PMS1-217ENST00000450931 A0A1B0GX51 115 aa3.13□□□□□ -1.91
PMS1-217ENST00000450931 H0YGX0 51 aa3.13□□□□□ -1.91
PMS1-217ENST00000450931 RAB37Q96AX2 223 aa3.13□□□□□ -1.91
PMS1-217ENST00000450931 ZCCHC13Q8WW36 166 aaKnown RBP3.12□□□□□ -1.91
PMS1-217ENST00000450931 A0A1W2PNM2 257 aa3.12□□□□□ -1.91
PMS1-217ENST00000450931 H3BMG7 143 aa3.12□□□□□ -1.91
PMS1-217ENST00000450931 Q8N9P0 234 aaPredicted RBP3.12□□□□□ -1.91
PMS1-217ENST00000450931 SPINK7P58062 85 aa3.11□□□□□ -1.91
PMS1-217ENST00000450931 ATOH7Q8N100 152 aa3.11□□□□□ -1.91
PMS1-217ENST00000450931 LINC00472Q9H8W2 130 aa3.11□□□□□ -1.91
PMS1-217ENST00000450931 FAM218AQ96MZ4 157 aa3.1□□□□□ -1.91
PMS1-217ENST00000450931 IGHV6-1A0A0B4J1U7 121 aa3.1□□□□□ -1.91
PMS1-217ENST00000450931 H3BQ85 93 aa3.1□□□□□ -1.91
PMS1-217ENST00000450931 A0A1B0GVX0 72 aa3.09□□□□□ -1.92
PMS1-217ENST00000450931 HSBP1L1C9JCN9 74 aa3.08□□□□□ -1.92
PMS1-217ENST00000450931 WFDC13Q8IUB5 93 aa3.08□□□□□ -1.92
PMS1-217ENST00000450931 ANKRD29Q8N6D5 301 aa3.08□□□□□ -1.92
PMS1-217ENST00000450931 FABP2P12104 132 aa3.07□□□□□ -1.92
PMS1-217ENST00000450931 HIST1H4GQ99525 98 aa3.07□□□□□ -1.92
PMS1-217ENST00000450931 A0A0B4J2C4 111 aa3.07□□□□□ -1.92
PMS1-217ENST00000450931 KRTAP5-9P26371 169 aa3.07□□□□□ -1.92
PMS1-217ENST00000450931 C21orf62-AS1Q17RA5 79 aa3.07□□□□□ -1.92
PMS1-217ENST00000450931 J3KT08 172 aa3.06□□□□□ -1.92
PMS1-217ENST00000450931 A6NN06 94 aa3.06□□□□□ -1.92
PMS1-217ENST00000450931 TRACP01848 142 aa3.06□□□□□ -1.92
Retrieved 100 of 20,778 RNA–protein pairs in 7.7 ms