RNA–Protein interactions for RNA: ENST00000448087.5

GTF3C3-205, Transcript of general transcription factor IIIC subunit 3, humanhuman

TSL 2

Gene GTF3C3, Length 1,702 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C3-205ENST00000448087 C10orf99Q6UWK7 81 aa1.36□□□□□ -2.19
GTF3C3-205ENST00000448087 TOMM7Q9P0U1 55 aa1.36□□□□□ -2.19
GTF3C3-205ENST00000448087 CHD7Q9P2D1 2997 aa1.35□□□□□ -2.19
GTF3C3-205ENST00000448087 RP1L1Q8IWN7 2480 aaPredicted RBP1.35□□□□□ -2.19
GTF3C3-205ENST00000448087 WNK2Q9Y3S1 2297 aa1.35□□□□□ -2.19
GTF3C3-205ENST00000448087 COL6A3P12111 3177 aa1.35□□□□□ -2.19
GTF3C3-205ENST00000448087 COX6B2Q6YFQ2 88 aa1.35□□□□□ -2.19
GTF3C3-205ENST00000448087 DEFB130BP0DP73 79 aa1.34□□□□□ -2.2
GTF3C3-205ENST00000448087 DEFB130AP0DP74 79 aa1.34□□□□□ -2.2
GTF3C3-205ENST00000448087 PCNX1Q96RV3 2341 aa1.34□□□□□ -2.2
GTF3C3-205ENST00000448087 FCGBPQ9Y6R7 5405 aaPredicted RBP1.34□□□□□ -2.2
GTF3C3-205ENST00000448087 LYNX1P0DP58 116 aa1.33□□□□□ -2.2
GTF3C3-205ENST00000448087 CLPSL2Q6UWE3 100 aa1.33□□□□□ -2.2
GTF3C3-205ENST00000448087 PTPRZ1P23471 2315 aaPredicted RBP1.33□□□□□ -2.2
GTF3C3-205ENST00000448087 FAM208BQ5VWN6 2430 aa1.33□□□□□ -2.2
GTF3C3-205ENST00000448087 JMJD1CQ15652 2540 aa1.33□□□□□ -2.2
GTF3C3-205ENST00000448087 DSPP15924 2871 aaKnown RBP1.32□□□□□ -2.2
GTF3C3-205ENST00000448087 DEFB131AP59861 70 aa1.32□□□□□ -2.2
GTF3C3-205ENST00000448087 RPL37P61927 97 aaKnown RBP1.32□□□□□ -2.2
GTF3C3-205ENST00000448087 H1FX-AS1Q4G0G2 97 aa1.32□□□□□ -2.2
GTF3C3-205ENST00000448087 DEFB123Q8N688 67 aa1.32□□□□□ -2.2
GTF3C3-205ENST00000448087 WNK1Q9H4A3 2382 aa1.32□□□□□ -2.2
GTF3C3-205ENST00000448087 H0YGG7 62 aa1.32□□□□□ -2.2
GTF3C3-205ENST00000448087 UBE2DNLQ8IWF7 75 aa1.32□□□□□ -2.2
GTF3C3-205ENST00000448087 APELAP0DMC3 54 aa1.31□□□□□ -2.2
GTF3C3-205ENST00000448087 COX14Q96I36 57 aa1.31□□□□□ -2.2
GTF3C3-205ENST00000448087 OTOGQ6ZRI0 2925 aa1.3□□□□□ -2.2
GTF3C3-205ENST00000448087 SPTBN1Q01082 2364 aaKnown RBP1.3□□□□□ -2.2
GTF3C3-205ENST00000448087 HELZ2Q9BYK8 2649 aaKnown RBP1.3□□□□□ -2.2
GTF3C3-205ENST00000448087 CELSR2Q9HCU4 2923 aa1.3□□□□□ -2.2
GTF3C3-205ENST00000448087 SRCAPQ6ZRS2 3230 aa1.29□□□□□ -2.2
GTF3C3-205ENST00000448087 KLK9Q2XQG4 91 aa1.29□□□□□ -2.2
GTF3C3-205ENST00000448087 TENM1Q9UKZ4 2725 aa1.29□□□□□ -2.2
GTF3C3-205ENST00000448087 PKDREJQ9NTG1 2253 aa1.29□□□□□ -2.2
GTF3C3-205ENST00000448087 UNQ6190/PRO20217Q6UXQ8 127 aa1.29□□□□□ -2.2
GTF3C3-205ENST00000448087 DEFB105AQ8NG35 78 aa1.29□□□□□ -2.2
GTF3C3-205ENST00000448087 USMG5Q96IX5 58 aa1.28□□□□□ -2.2
GTF3C3-205ENST00000448087 ZNF462Q96JM2 2506 aa1.28□□□□□ -2.21
GTF3C3-205ENST00000448087 DEFB1P60022 68 aa1.27□□□□□ -2.21
GTF3C3-205ENST00000448087 SPINK13Q1W4C9 94 aa1.27□□□□□ -2.21
GTF3C3-205ENST00000448087 GVINP1Q7Z2Y8 2422 aa1.27□□□□□ -2.21
GTF3C3-205ENST00000448087 SPTA1P02549 2419 aa1.27□□□□□ -2.21
GTF3C3-205ENST00000448087 K7EIL1 84 aa1.26□□□□□ -2.21
GTF3C3-205ENST00000448087 CEP350Q5VT06 3117 aa1.26□□□□□ -2.21
GTF3C3-205ENST00000448087 RANBP2P49792 3224 aaKnown RBP1.26□□□□□ -2.21
GTF3C3-205ENST00000448087 KRTAP10-4P60372 401 aaPredicted RBP1.26□□□□□ -2.21
GTF3C3-205ENST00000448087 ACACAQ13085 2346 aa1.26□□□□□ -2.21
GTF3C3-205ENST00000448087 DEFB109BQ30KR1 87 aa1.26□□□□□ -2.21
GTF3C3-205ENST00000448087 GOLGB1Q14789 3259 aaKnown RBP1.25□□□□□ -2.21
GTF3C3-205ENST00000448087 ASH1LQ9NR48 2969 aaKnown RBP1.25□□□□□ -2.21
GTF3C3-205ENST00000448087 CSPG4Q6UVK1 2322 aa1.25□□□□□ -2.21
GTF3C3-205ENST00000448087 SPRR1AP35321 89 aa1.25□□□□□ -2.21
GTF3C3-205ENST00000448087 ROS1P08922 2347 aa1.24□□□□□ -2.21
GTF3C3-205ENST00000448087 TRANK1O15050 2925 aa1.24□□□□□ -2.21
GTF3C3-205ENST00000448087 DEFB119Q8N690 84 aa1.24□□□□□ -2.21
GTF3C3-205ENST00000448087 CEP250Q9BV73 2442 aa1.24□□□□□ -2.21
GTF3C3-205ENST00000448087 PRLHP81277 87 aa1.23□□□□□ -2.21
GTF3C3-205ENST00000448087 AKAP6Q13023 2319 aa1.23□□□□□ -2.21
GTF3C3-205ENST00000448087 SZT2Q5T011 3432 aa1.23□□□□□ -2.21
GTF3C3-205ENST00000448087 APLNQ9ULZ1 77 aa1.23□□□□□ -2.21
GTF3C3-205ENST00000448087 TNRC18O15417 2968 aaPredicted RBP1.23□□□□□ -2.21
GTF3C3-205ENST00000448087 CRYBG3Q68DQ2 2970 aa1.22□□□□□ -2.21
GTF3C3-205ENST00000448087 C2CD3Q4AC94 2353 aa1.22□□□□□ -2.21
GTF3C3-205ENST00000448087 DEFB110Q30KQ9 67 aa1.22□□□□□ -2.21
GTF3C3-205ENST00000448087 S4R3F8 94 aa1.22□□□□□ -2.21
GTF3C3-205ENST00000448087 WDR87Q6ZQQ6 2873 aa1.22□□□□□ -2.21
GTF3C3-205ENST00000448087 UBR5O95071 2799 aaPredicted RBP1.22□□□□□ -2.21
GTF3C3-205ENST00000448087 SPTBN2O15020 2390 aa1.21□□□□□ -2.22
GTF3C3-205ENST00000448087 H3BUA1 57 aa1.21□□□□□ -2.22
GTF3C3-205ENST00000448087 SPRR1BP22528 89 aa1.21□□□□□ -2.22
GTF3C3-205ENST00000448087 SPTBN4Q9H254 2564 aa1.21□□□□□ -2.22
GTF3C3-205ENST00000448087 MACF1Q9UPN3 7388 aaKnown RBP1.21□□□□□ -2.22
GTF3C3-205ENST00000448087 CFAP54Q96N23 3096 aa1.21□□□□□ -2.22
GTF3C3-205ENST00000448087 AHNAK2Q8IVF2 5795 aa1.21□□□□□ -2.22
GTF3C3-205ENST00000448087 CHD6Q8TD26 2715 aa1.21□□□□□ -2.22
GTF3C3-205ENST00000448087 TENM2Q9NT68 2774 aa1.21□□□□□ -2.22
GTF3C3-205ENST00000448087 SPINK1P00995 79 aa1.2□□□□□ -2.22
GTF3C3-205ENST00000448087 HTTP42858 3142 aa1.2□□□□□ -2.22
GTF3C3-205ENST00000448087 NBEAQ8NFP9 2946 aa1.2□□□□□ -2.22
GTF3C3-205ENST00000448087 VPS13AQ96RL7 3174 aa1.2□□□□□ -2.22
GTF3C3-205ENST00000448087 PRUNE2Q8WUY3 3088 aa1.2□□□□□ -2.22
GTF3C3-205ENST00000448087 RHPN1-AS1Q9BWJ2 59 aa1.19□□□□□ -2.22
GTF3C3-205ENST00000448087 ABCA2Q9BZC7 2435 aa1.19□□□□□ -2.22
GTF3C3-205ENST00000448087 TRIOO75962 3097 aa1.19□□□□□ -2.22
GTF3C3-205ENST00000448087 MKI67P46013 3256 aaKnown RBP1.19□□□□□ -2.22
GTF3C3-205ENST00000448087 NCOR1O75376 2440 aa1.19□□□□□ -2.22
GTF3C3-205ENST00000448087 CREBBPQ92793 2442 aa1.19□□□□□ -2.22
GTF3C3-205ENST00000448087 SRRM2Q9UQ35 2752 aaKnown RBP1.19□□□□□ -2.22
GTF3C3-205ENST00000448087 C5orf42Q9H799 3197 aa1.18□□□□□ -2.22
GTF3C3-205ENST00000448087 ABCA12Q86UK0 2595 aa1.18□□□□□ -2.22
GTF3C3-205ENST00000448087 VWFP04275 2813 aa1.18□□□□□ -2.22
GTF3C3-205ENST00000448087 CACNA1HO95180 2353 aa1.18□□□□□ -2.22
GTF3C3-205ENST00000448087 PRRC2CQ9Y520 2896 aaKnown RBP1.18□□□□□ -2.22
GTF3C3-205ENST00000448087 NAV2Q8IVL1 2488 aa1.18□□□□□ -2.22
GTF3C3-205ENST00000448087 HTN1P15515 57 aa1.18□□□□□ -2.22
GTF3C3-205ENST00000448087 DEFB108BQ8NET1 73 aa1.18□□□□□ -2.22
GTF3C3-205ENST00000448087 PRO0255Q9UI72 69 aa1.18□□□□□ -2.22
GTF3C3-205ENST00000448087 FRYLO94915 3013 aa1.17□□□□□ -2.22
GTF3C3-205ENST00000448087 F8P00451 2351 aa1.17□□□□□ -2.22
GTF3C3-205ENST00000448087 CEP290O15078 2479 aa1.17□□□□□ -2.22
Retrieved 100 of 20,778 RNA–protein pairs in 66.6 ms