RNA–Protein interactions for RNA: ENST00000444191.5

HCFC1-203, Transcript of host cell factor C1, humanhuman

TSL 5

Gene HCFC1, Length 3,624 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HCFC1-203ENST00000444191 PCOTHQ58A44 107 aa7.51□□□□□ -1.21
HCFC1-203ENST00000444191 PHF5AQ7RTV0 110 aaKnown RBP7.51□□□□□ -1.21
HCFC1-203ENST00000444191 OCR1Q9BZK8 76 aa7.5□□□□□ -1.21
HCFC1-203ENST00000444191 SRRM2Q9UQ35 2752 aaKnown RBP7.5□□□□□ -1.21
HCFC1-203ENST00000444191 SPINK6Q6UWN8 80 aa7.49□□□□□ -1.21
HCFC1-203ENST00000444191 ANK3Q12955 4377 aaKnown RBP7.49□□□□□ -1.21
HCFC1-203ENST00000444191 CASC2Q6XLA1 102 aa7.48□□□□□ -1.21
HCFC1-203ENST00000444191 NDUFB1O75438 58 aa7.48□□□□□ -1.21
HCFC1-203ENST00000444191 KRTAP26-1Q6PEX3 210 aa7.48□□□□□ -1.21
HCFC1-203ENST00000444191 C1orf64Q8NEQ6 169 aa7.47□□□□□ -1.21
HCFC1-203ENST00000444191 H3BNG1 76 aa7.47□□□□□ -1.21
HCFC1-203ENST00000444191 IGFL1Q6UW32 110 aa7.47□□□□□ -1.21
HCFC1-203ENST00000444191 DNAH10OSP0CZ25 163 aa7.46□□□□□ -1.21
HCFC1-203ENST00000444191 H0Y9P7 68 aa7.46□□□□□ -1.22
HCFC1-203ENST00000444191 B9D2Q9BPU9 175 aa7.45□□□□□ -1.22
HCFC1-203ENST00000444191 DSCR10P59022 87 aa7.45□□□□□ -1.22
HCFC1-203ENST00000444191 IGLV5-48A0A075B6I7 105 aa7.44□□□□□ -1.22
HCFC1-203ENST00000444191 CHKB-CPT1BH3BT56 60 aa7.44□□□□□ -1.22
HCFC1-203ENST00000444191 A8MUN3 132 aa7.41□□□□□ -1.22
HCFC1-203ENST00000444191 IGHV6-1A0A0B4J1U7 121 aa7.41□□□□□ -1.22
HCFC1-203ENST00000444191 PRR15LQ9BU68 103 aa7.41□□□□□ -1.22
HCFC1-203ENST00000444191 CSMD3Q7Z407 3707 aa7.4□□□□□ -1.22
HCFC1-203ENST00000444191 hDV103S1A0JD37 113 aa7.39□□□□□ -1.23
HCFC1-203ENST00000444191 A8MU10 97 aa7.39□□□□□ -1.23
HCFC1-203ENST00000444191 TRAV22A0A0B4J277 110 aa7.38□□□□□ -1.23
HCFC1-203ENST00000444191 A6NED7 52 aa7.38□□□□□ -1.23
HCFC1-203ENST00000444191 ANAPC11Q9NYG5 84 aa7.38□□□□□ -1.23
HCFC1-203ENST00000444191 PRR15Q8IV56 129 aa7.36□□□□□ -1.23
HCFC1-203ENST00000444191 RETNLBQ9BQ08 111 aa7.36□□□□□ -1.23
HCFC1-203ENST00000444191 COL7A1Q02388 2944 aa7.35□□□□□ -1.23
HCFC1-203ENST00000444191 C16orf90A8MZG2 172 aa7.35□□□□□ -1.23
HCFC1-203ENST00000444191 TLX1NBP0CAT3 122 aa7.34□□□□□ -1.23
HCFC1-203ENST00000444191 KRTAP7-1Q8IUC3 87 aa7.34□□□□□ -1.23
HCFC1-203ENST00000444191 K7EIL1 84 aa7.33□□□□□ -1.24
HCFC1-203ENST00000444191 C14orf177Q52M58 125 aa7.33□□□□□ -1.24
HCFC1-203ENST00000444191 KRTAP1-5Q9BYS1 174 aa7.33□□□□□ -1.24
HCFC1-203ENST00000444191 SPRR4Q96PI1 79 aa7.32□□□□□ -1.24
HCFC1-203ENST00000444191 SPAG11AQ6PDA7 123 aa7.32□□□□□ -1.24
HCFC1-203ENST00000444191 MOBPQ13875 183 aa7.31□□□□□ -1.24
HCFC1-203ENST00000444191 KRTAP4-16G5E9R7 235 aaPredicted RBP7.3□□□□□ -1.24
HCFC1-203ENST00000444191 SPRR1AP35321 89 aa7.3□□□□□ -1.24
HCFC1-203ENST00000444191 CIRBP-AS1Q8TBR5 109 aa7.3□□□□□ -1.24
HCFC1-203ENST00000444191 Q1T7F1 81 aa7.29□□□□□ -1.24
HCFC1-203ENST00000444191 PLA2G2DQ9UNK4 145 aa7.29□□□□□ -1.24
HCFC1-203ENST00000444191 A0A1B0GW54 56 aa7.29□□□□□ -1.24
HCFC1-203ENST00000444191 TNP2Q05952 138 aa7.28□□□□□ -1.24
HCFC1-203ENST00000444191 MDFIQ99750 246 aa7.27□□□□□ -1.25
HCFC1-203ENST00000444191 A8MWP4 228 aa7.27□□□□□ -1.25
HCFC1-203ENST00000444191 CD164Q04900 197 aa7.26□□□□□ -1.25
HCFC1-203ENST00000444191 KRTAP11-1Q8IUC1 163 aa7.26□□□□□ -1.25
HCFC1-203ENST00000444191 IGLV5-37A0A075B6J1 123 aa7.25□□□□□ -1.25
HCFC1-203ENST00000444191 TGP01266 2768 aa7.23□□□□□ -1.25
HCFC1-203ENST00000444191 CNBPP62633 177 aaKnown RBP7.23□□□□□ -1.25
HCFC1-203ENST00000444191 COA5Q86WW8 74 aa7.22□□□□□ -1.25
HCFC1-203ENST00000444191 PANO1I0J062 215 aa7.21□□□□□ -1.25
HCFC1-203ENST00000444191 Q5VV11 94 aa7.21□□□□□ -1.25
HCFC1-203ENST00000444191 RBM12B-AS1Q9P1G2 102 aa7.2□□□□□ -1.26
HCFC1-203ENST00000444191 NBDYA0A0U1RRE5 68 aa7.2□□□□□ -1.26
HCFC1-203ENST00000444191 C9orf163Q8N9P6 203 aa7.19□□□□□ -1.26
HCFC1-203ENST00000444191 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP7.19□□□□□ -1.26
HCFC1-203ENST00000444191 LY6G6CO95867 125 aa7.18□□□□□ -1.26
HCFC1-203ENST00000444191 KTN1-AS1Q86SY8 53 aa7.17□□□□□ -1.26
HCFC1-203ENST00000444191 LIMD2Q9BT23 127 aa7.17□□□□□ -1.26
HCFC1-203ENST00000444191 ZCCHC13Q8WW36 166 aaKnown RBP7.16□□□□□ -1.26
HCFC1-203ENST00000444191 ANK2Q01484 3957 aa7.16□□□□□ -1.26
HCFC1-203ENST00000444191 C8orf17Q9NRJ1 99 aa7.15□□□□□ -1.26
HCFC1-203ENST00000444191 CYP4F30PQ9H0H9 118 aa7.15□□□□□ -1.27
HCFC1-203ENST00000444191 IGLV5-52A0A0A0MRZ9 124 aa7.14□□□□□ -1.27
HCFC1-203ENST00000444191 Q8N9P0 234 aaPredicted RBP7.14□□□□□ -1.27
HCFC1-203ENST00000444191 LINC00472Q9H8W2 130 aa7.13□□□□□ -1.27
HCFC1-203ENST00000444191 CMYA5Q8N3K9 4069 aa7.13□□□□□ -1.27
HCFC1-203ENST00000444191 PSORS1C2Q9UIG4 136 aa7.13□□□□□ -1.27
HCFC1-203ENST00000444191 APLNQ9ULZ1 77 aa7.13□□□□□ -1.27
HCFC1-203ENST00000444191 PRR26Q8N8Z3 221 aa7.13□□□□□ -1.27
HCFC1-203ENST00000444191 ZNF706Q9Y5V0 76 aaPredicted RBP7.13□□□□□ -1.27
HCFC1-203ENST00000444191 MMP24-AS1A0A0U1RRL7 71 aa7.12□□□□□ -1.27
HCFC1-203ENST00000444191 RTL8CO15255 209 aa7.12□□□□□ -1.27
HCFC1-203ENST00000444191 SPINK1P00995 79 aa7.11□□□□□ -1.27
HCFC1-203ENST00000444191 LCA10Q71F78 164 aa7.11□□□□□ -1.27
HCFC1-203ENST00000444191 LCE6AA0A183 80 aa7.1□□□□□ -1.27
HCFC1-203ENST00000444191 MRPL34Q9BQ48 92 aaKnown RBP7.1□□□□□ -1.27
HCFC1-203ENST00000444191 NUPR2A6NF83 97 aa7.1□□□□□ -1.27
HCFC1-203ENST00000444191 H3BPC8 53 aa7.1□□□□□ -1.27
HCFC1-203ENST00000444191 KRTAP29-1A8MX34 341 aaPredicted RBP7.09□□□□□ -1.27
HCFC1-203ENST00000444191 IGKV2D-30A0A075B6S6 120 aa7.09□□□□□ -1.27
HCFC1-203ENST00000444191 A0A1B0GVX0 72 aa7.09□□□□□ -1.27
HCFC1-203ENST00000444191 IGKV2-30P06310 120 aa7.09□□□□□ -1.27
HCFC1-203ENST00000444191 TP53AIP1Q9HCN2 124 aa7.09□□□□□ -1.27
HCFC1-203ENST00000444191 IGLV8-61A0A075B6I0 122 aa7.08□□□□□ -1.28
HCFC1-203ENST00000444191 ATP11AUNQ6ZP68 121 aa7.08□□□□□ -1.28
HCFC1-203ENST00000444191 A0A087X002 238 aa7.07□□□□□ -1.28
HCFC1-203ENST00000444191 NOTCH2NLQ7Z3S9 236 aa7.07□□□□□ -1.28
HCFC1-203ENST00000444191 A0A087WTM6 91 aa7.06□□□□□ -1.28
HCFC1-203ENST00000444191 SPACA4Q8TDM5 124 aa7.06□□□□□ -1.28
HCFC1-203ENST00000444191 LOC101927531A0A1B0GV80 90 aa7.05□□□□□ -1.28
HCFC1-203ENST00000444191 SPANXA2-OT1Q8N9U9 137 aa7.05□□□□□ -1.28
HCFC1-203ENST00000444191 C4orf48Q5BLP8 95 aa7.05□□□□□ -1.28
HCFC1-203ENST00000444191 FBN3Q75N90 2809 aa7.04□□□□□ -1.28
HCFC1-203ENST00000444191 C1orf134Q5TEV5 83 aa7.03□□□□□ -1.28
HCFC1-203ENST00000444191 ZNF861PO60384 105 aa7.02□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 10.5 ms