RNA–Protein interactions for RNA: ENST00000443727.1

LRCH3-208, Transcript of leucine rich repeats and calponin homology domain containing 3, humanhuman

TSL 4

Gene LRCH3, Length 611 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRCH3-208ENST00000443727 C1orf195Q5TG92 126 aa10.98□□□□□ -0.65
LRCH3-208ENST00000443727 C14orf144Q96I85 54 aa10.98□□□□□ -0.65
LRCH3-208ENST00000443727 PAM16Q9Y3D7 125 aa10.96□□□□□ -0.65
LRCH3-208ENST00000443727 SPATA45Q537H7 98 aa10.95□□□□□ -0.66
LRCH3-208ENST00000443727 Q6JHZ5 121 aa10.95□□□□□ -0.66
LRCH3-208ENST00000443727 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP10.95□□□□□ -0.66
LRCH3-208ENST00000443727 RAB37Q96AX2 223 aa10.95□□□□□ -0.66
LRCH3-208ENST00000443727 PCOTHQ58A44 107 aa10.93□□□□□ -0.66
LRCH3-208ENST00000443727 VAMP8Q9BV40 100 aa10.93□□□□□ -0.66
LRCH3-208ENST00000443727 SNHG12Q9BXW3 62 aa10.93□□□□□ -0.66
LRCH3-208ENST00000443727 OCIAD2Q56VL3 154 aa10.92□□□□□ -0.66
LRCH3-208ENST00000443727 SNCGO76070 127 aa10.91□□□□□ -0.66
LRCH3-208ENST00000443727 CFC1BP0CG36 223 aa10.91□□□□□ -0.66
LRCH3-208ENST00000443727 CFC1P0CG37 223 aa10.91□□□□□ -0.66
LRCH3-208ENST00000443727 CLEC2BQ92478 149 aa10.91□□□□□ -0.66
LRCH3-208ENST00000443727 HIGD1BQ9P298 99 aa10.91□□□□□ -0.66
LRCH3-208ENST00000443727 PPDPFLQ8WWR9 84 aa10.9□□□□□ -0.66
LRCH3-208ENST00000443727 IGLV8-61A0A075B6I0 122 aa10.89□□□□□ -0.67
LRCH3-208ENST00000443727 IGFL1Q6UW32 110 aa10.89□□□□□ -0.67
LRCH3-208ENST00000443727 A0A0B4J2C4 111 aa10.86□□□□□ -0.67
LRCH3-208ENST00000443727 TRBV7-7A0A0K0K1E9 115 aa10.86□□□□□ -0.67
LRCH3-208ENST00000443727 H0YGX0 51 aa10.85□□□□□ -0.67
LRCH3-208ENST00000443727 C2orf91Q6ZV80 131 aa10.85□□□□□ -0.67
LRCH3-208ENST00000443727 KRTAP9-2Q9BYQ4 174 aa10.85□□□□□ -0.67
LRCH3-208ENST00000443727 H3BUT2 72 aa10.83□□□□□ -0.68
LRCH3-208ENST00000443727 TMEM238LA0A1B0GVL6 79 aa10.82□□□□□ -0.68
LRCH3-208ENST00000443727 A6NJY4 79 aa10.82□□□□□ -0.68
LRCH3-208ENST00000443727 CEND1Q8N111 149 aa10.82□□□□□ -0.68
LRCH3-208ENST00000443727 PRO1854Q9UHT4 67 aa10.8□□□□□ -0.68
LRCH3-208ENST00000443727 RPL37P61927 97 aaKnown RBP10.79□□□□□ -0.68
LRCH3-208ENST00000443727 FAM218AQ96MZ4 157 aa10.78□□□□□ -0.68
LRCH3-208ENST00000443727 LST1O00453 97 aa10.75□□□□□ -0.69
LRCH3-208ENST00000443727 GHRHP01286 108 aa10.75□□□□□ -0.69
LRCH3-208ENST00000443727 NDUFV3P56181 108 aaKnown RBP10.75□□□□□ -0.69
LRCH3-208ENST00000443727 FXYD2P54710 66 aa10.74□□□□□ -0.69
LRCH3-208ENST00000443727 FABP2P12104 132 aa10.73□□□□□ -0.69
LRCH3-208ENST00000443727 A0A1B0GX51 115 aa10.72□□□□□ -0.69
LRCH3-208ENST00000443727 SS18L2Q9UHA2 77 aa10.72□□□□□ -0.69
LRCH3-208ENST00000443727 LCE2CQ5TA81 110 aa10.71□□□□□ -0.69
LRCH3-208ENST00000443727 OBSCN-AS1Q96MR7 158 aa10.71□□□□□ -0.69
LRCH3-208ENST00000443727 H3BMG7 143 aa10.7□□□□□ -0.7
LRCH3-208ENST00000443727 TRIAP1O43715 76 aa10.7□□□□□ -0.7
LRCH3-208ENST00000443727 Q6Q795 121 aa10.7□□□□□ -0.7
LRCH3-208ENST00000443727 TEN1Q86WV5 123 aa10.7□□□□□ -0.7
LRCH3-208ENST00000443727 HSD52Q0P140 79 aa10.69□□□□□ -0.7
LRCH3-208ENST00000443727 PYY3Q5JQD4 70 aa10.69□□□□□ -0.7
LRCH3-208ENST00000443727 PSMB2P49721 201 aa10.67□□□□□ -0.7
LRCH3-208ENST00000443727 KRTAP19-2Q3LHN2 52 aa10.67□□□□□ -0.7
LRCH3-208ENST00000443727 DNAL4O96015 105 aa10.66□□□□□ -0.7
LRCH3-208ENST00000443727 TMA7Q9Y2S6 64 aaKnown RBP10.65□□□□□ -0.7
LRCH3-208ENST00000443727 A0A087WSZ3 146 aa10.64□□□□□ -0.71
LRCH3-208ENST00000443727 K7ERJ3 54 aa10.64□□□□□ -0.71
LRCH3-208ENST00000443727 ATP11AUNQ6ZP68 121 aa10.63□□□□□ -0.71
LRCH3-208ENST00000443727 COX6CP09669 75 aa10.62□□□□□ -0.71
LRCH3-208ENST00000443727 COX6B2Q6YFQ2 88 aa10.62□□□□□ -0.71
LRCH3-208ENST00000443727 Q96NJ1 140 aa10.62□□□□□ -0.71
LRCH3-208ENST00000443727 MT1HP80294 61 aa10.61□□□□□ -0.71
LRCH3-208ENST00000443727 Q75L30 129 aa10.61□□□□□ -0.71
LRCH3-208ENST00000443727 ORMDL1Q9P0S3 153 aa10.61□□□□□ -0.71
LRCH3-208ENST00000443727 UQCR10Q9UDW1 63 aa10.6□□□□□ -0.71
LRCH3-208ENST00000443727 H3BQ85 93 aa10.59□□□□□ -0.71
LRCH3-208ENST00000443727 A0A1B0GV72 72 aa10.58□□□□□ -0.72
LRCH3-208ENST00000443727 ANKRD29Q8N6D5 301 aa10.57□□□□□ -0.72
LRCH3-208ENST00000443727 A0A1W2PNM2 257 aa10.55□□□□□ -0.72
LRCH3-208ENST00000443727 TMEM256-PLSCR3K7ERE1 68 aa10.55□□□□□ -0.72
LRCH3-208ENST00000443727 SIGMAR1Q99720 223 aa10.54□□□□□ -0.72
LRCH3-208ENST00000443727 M0R2T5 61 aa10.53□□□□□ -0.72
LRCH3-208ENST00000443727 SCGB1C2P0DMR2 95 aa10.51□□□□□ -0.73
LRCH3-208ENST00000443727 TRBV7-4A0A0J9YYF1 115 aa10.5□□□□□ -0.73
LRCH3-208ENST00000443727 KRTAP9-6A0A140TA67 174 aa10.5□□□□□ -0.73
LRCH3-208ENST00000443727 LCE2DQ5TA82 110 aaPredicted RBP10.49□□□□□ -0.73
LRCH3-208ENST00000443727 DSCR10P59022 87 aa10.48□□□□□ -0.73
LRCH3-208ENST00000443727 C20orf166-AS1Q96NR2 134 aa10.48□□□□□ -0.73
LRCH3-208ENST00000443727 CCKP06307 115 aa10.47□□□□□ -0.73
LRCH3-208ENST00000443727 A8MUU9 505 aa10.46□□□□□ -0.73
LRCH3-208ENST00000443727 TRACP01848 142 aa10.46□□□□□ -0.73
LRCH3-208ENST00000443727 IGKV4-1P06312 121 aa10.46□□□□□ -0.73
LRCH3-208ENST00000443727 UBE2V1Q13404 147 aa10.46□□□□□ -0.73
LRCH3-208ENST00000443727 LINC00313P59037 77 aa10.43□□□□□ -0.74
LRCH3-208ENST00000443727 VPS25Q9BRG1 176 aa10.42□□□□□ -0.74
LRCH3-208ENST00000443727 KRTAP10-6P60371 365 aaPredicted RBP10.41□□□□□ -0.74
LRCH3-208ENST00000443727 DEFB116Q30KQ4 102 aa10.41□□□□□ -0.74
LRCH3-208ENST00000443727 LORP23490 312 aaPredicted RBP10.39□□□□□ -0.75
LRCH3-208ENST00000443727 RBM3P98179 157 aaKnown RBP10.39□□□□□ -0.75
LRCH3-208ENST00000443727 DSCR8Q96T75 97 aa10.38□□□□□ -0.75
LRCH3-208ENST00000443727 LINC00472Q9H8W2 130 aa10.37□□□□□ -0.75
LRCH3-208ENST00000443727 TRBV20-1A0A075B6N2 111 aa10.36□□□□□ -0.75
LRCH3-208ENST00000443727 BAALC-AS2P0C853 105 aa10.36□□□□□ -0.75
LRCH3-208ENST00000443727 IGHV6-1A0A0B4J1U7 121 aa10.35□□□□□ -0.75
LRCH3-208ENST00000443727 M0R143 59 aa10.35□□□□□ -0.75
LRCH3-208ENST00000443727 FLGP20930 4061 aaPredicted RBP10.33□□□□□ -0.76
LRCH3-208ENST00000443727 C9JAW5 83 aa10.32□□□□□ -0.76
LRCH3-208ENST00000443727 NOTCH2NLQ7Z3S9 236 aa10.31□□□□□ -0.76
LRCH3-208ENST00000443727 KRTAP16-1A8MUX0 517 aa10.3□□□□□ -0.76
LRCH3-208ENST00000443727 ATXN8Q156A1 80 aa10.29□□□□□ -0.76
LRCH3-208ENST00000443727 C21orf62-AS1Q17RA5 79 aa10.28□□□□□ -0.76
LRCH3-208ENST00000443727 NAA38Q9BRA0 125 aaKnown RBP10.28□□□□□ -0.76
LRCH3-208ENST00000443727 CRCT1Q9UGL9 99 aa10.26□□□□□ -0.77
LRCH3-208ENST00000443727 A0A1B0GVX0 72 aa10.25□□□□□ -0.77
LRCH3-208ENST00000443727 FSIP2Q5CZC0 6907 aa10.24□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 48 ms