RNA–Protein interactions for RNA: ENST00000440653.1

HDAC6-209, Transcript of histone deacetylase 6, humanhuman

TSL 4

Gene HDAC6, Length 658 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-209ENST00000440653 M0R2N4 97 aa5.8□□□□□ -1.48
HDAC6-209ENST00000440653 KRTAP7-1Q8IUC3 87 aa5.8□□□□□ -1.48
HDAC6-209ENST00000440653 IGKV2-24A0A0C4DH68 120 aa5.79□□□□□ -1.48
HDAC6-209ENST00000440653 EPM2AB3EWF7 344 aa5.79□□□□□ -1.48
HDAC6-209ENST00000440653 H0Y9J4 135 aa5.79□□□□□ -1.48
HDAC6-209ENST00000440653 UBE2BP63146 152 aa5.79□□□□□ -1.48
HDAC6-209ENST00000440653 Q9BRP9 147 aa5.79□□□□□ -1.48
HDAC6-209ENST00000440653 IGLV2-33A0A075B6J2 118 aaPredicted RBP5.78□□□□□ -1.48
HDAC6-209ENST00000440653 IGKV3D-7A0A0C4DH55 119 aa5.78□□□□□ -1.48
HDAC6-209ENST00000440653 KRTAP9-6A0A140TA67 174 aa5.78□□□□□ -1.48
HDAC6-209ENST00000440653 F8WEM9 126 aa5.78□□□□□ -1.48
HDAC6-209ENST00000440653 FUSP35637 526 aaKnown RBP eCLIP5.78□□□□□ -1.48
HDAC6-209ENST00000440653 Q6ZVQ6 151 aa5.78□□□□□ -1.48
HDAC6-209ENST00000440653 LINC01547P58512 204 aaPredicted RBP5.77□□□□□ -1.49
HDAC6-209ENST00000440653 TNP2Q05952 138 aa5.77□□□□□ -1.49
HDAC6-209ENST00000440653 Q8N377 158 aa5.77□□□□□ -1.49
HDAC6-209ENST00000440653 KRTAP9-2Q9BYQ4 174 aa5.77□□□□□ -1.49
HDAC6-209ENST00000440653 UQCRQO14949 82 aa5.76□□□□□ -1.49
HDAC6-209ENST00000440653 BCE1O60756 84 aa5.76□□□□□ -1.49
HDAC6-209ENST00000440653 J3QL48 77 aa5.75□□□□□ -1.49
HDAC6-209ENST00000440653 FAM19A1Q7Z5A9 133 aa5.75□□□□□ -1.49
HDAC6-209ENST00000440653 A0A087WTM6 91 aa5.74□□□□□ -1.49
HDAC6-209ENST00000440653 C1orf137Q5JT78 98 aa5.74□□□□□ -1.49
HDAC6-209ENST00000440653 Q6ZR54 194 aa5.74□□□□□ -1.49
HDAC6-209ENST00000440653 SMIM20Q8N5G0 67 aa5.74□□□□□ -1.49
HDAC6-209ENST00000440653 Q8NBF4 154 aa5.74□□□□□ -1.49
HDAC6-209ENST00000440653 IGLV8-61A0A075B6I0 122 aa5.73□□□□□ -1.49
HDAC6-209ENST00000440653 A0A1W2PNN7 141 aa5.73□□□□□ -1.49
HDAC6-209ENST00000440653 COX7CP15954 63 aa5.73□□□□□ -1.49
HDAC6-209ENST00000440653 HAMPP81172 84 aa5.73□□□□□ -1.49
HDAC6-209ENST00000440653 DEFB105AQ8NG35 78 aa5.73□□□□□ -1.49
HDAC6-209ENST00000440653 SPACA4Q8TDM5 124 aa5.73□□□□□ -1.49
HDAC6-209ENST00000440653 SPRR1BP22528 89 aa5.72□□□□□ -1.49
HDAC6-209ENST00000440653 C3orf22Q8N5N4 141 aa5.72□□□□□ -1.49
HDAC6-209ENST00000440653 SERP2Q8N6R1 65 aa5.72□□□□□ -1.49
HDAC6-209ENST00000440653 SPRR4Q96PI1 79 aa5.72□□□□□ -1.49
HDAC6-209ENST00000440653 A0A087WVE0 104 aa5.71□□□□□ -1.5
HDAC6-209ENST00000440653 CCDC179H3BU77 68 aa5.71□□□□□ -1.5
HDAC6-209ENST00000440653 CHTF8P0CG12 524 aa5.71□□□□□ -1.5
HDAC6-209ENST00000440653 UBE2AP49459 152 aa5.71□□□□□ -1.5
HDAC6-209ENST00000440653 NREPQ16612 68 aa5.71□□□□□ -1.5
HDAC6-209ENST00000440653 ERC2-IT1O76042 136 aa5.7□□□□□ -1.5
HDAC6-209ENST00000440653 PRLHP81277 87 aa5.7□□□□□ -1.5
HDAC6-209ENST00000440653 C9orf153Q5TBE3 101 aa5.7□□□□□ -1.5
HDAC6-209ENST00000440653 PHF5AQ7RTV0 110 aaKnown RBP5.7□□□□□ -1.5
HDAC6-209ENST00000440653 ST20-AS1Q8NBB2 130 aa5.7□□□□□ -1.5
HDAC6-209ENST00000440653 HIGD2AQ9BW72 106 aa5.7□□□□□ -1.5
HDAC6-209ENST00000440653 C1orf134Q5TEV5 83 aa5.69□□□□□ -1.5
HDAC6-209ENST00000440653 Q5VSD8 79 aa5.69□□□□□ -1.5
HDAC6-209ENST00000440653 BPY2O14599 106 aa5.68□□□□□ -1.5
HDAC6-209ENST00000440653 CRYGAP11844 174 aa5.68□□□□□ -1.5
HDAC6-209ENST00000440653 SMIM29Q86T20 159 aa5.68□□□□□ -1.5
HDAC6-209ENST00000440653 ZNF706Q9Y5V0 76 aaPredicted RBP5.68□□□□□ -1.5
HDAC6-209ENST00000440653 A0A1W2PNM2 257 aa5.67□□□□□ -1.5
HDAC6-209ENST00000440653 KRTAP13-1Q8IUC0 172 aa5.67□□□□□ -1.5
HDAC6-209ENST00000440653 RPL37AP61513 92 aaKnown RBP5.66□□□□□ -1.5
HDAC6-209ENST00000440653 TRAV7A0A075B6U4 112 aa5.65□□□□□ -1.5
HDAC6-209ENST00000440653 IGLV5-52A0A0A0MRZ9 124 aa5.65□□□□□ -1.5
HDAC6-209ENST00000440653 PLAC8Q9NZF1 115 aa5.65□□□□□ -1.5
HDAC6-209ENST00000440653 LRP2P98164 4655 aa5.64□□□□□ -1.51
HDAC6-209ENST00000440653 IGKV4-1P06312 121 aa5.64□□□□□ -1.51
HDAC6-209ENST00000440653 IGFL1Q6UW32 110 aa5.64□□□□□ -1.51
HDAC6-209ENST00000440653 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP5.64□□□□□ -1.51
HDAC6-209ENST00000440653 LRP1Q07954 4544 aaKnown RBP5.64□□□□□ -1.51
HDAC6-209ENST00000440653 DPH3Q96FX2 82 aa5.63□□□□□ -1.51
HDAC6-209ENST00000440653 PANO1I0J062 215 aa5.62□□□□□ -1.51
HDAC6-209ENST00000440653 TMEM258P61165 79 aa5.62□□□□□ -1.51
HDAC6-209ENST00000440653 LINC00483Q53H64 154 aa5.62□□□□□ -1.51
HDAC6-209ENST00000440653 SCXQ7RTU7 201 aa5.62□□□□□ -1.51
HDAC6-209ENST00000440653 KRTAP11-1Q8IUC1 163 aa5.62□□□□□ -1.51
HDAC6-209ENST00000440653 KRTAP10-2P60368 255 aa5.6□□□□□ -1.51
HDAC6-209ENST00000440653 PKHD1L1Q86WI1 4243 aa5.59□□□□□ -1.51
HDAC6-209ENST00000440653 KRTAP29-1A8MX34 341 aaPredicted RBP5.59□□□□□ -1.51
HDAC6-209ENST00000440653 SMR3BP02814 79 aaPredicted RBP5.59□□□□□ -1.51
HDAC6-209ENST00000440653 SS18L2Q9UHA2 77 aa5.59□□□□□ -1.51
HDAC6-209ENST00000440653 FAT3Q8TDW7 4589 aa5.58□□□□□ -1.52
HDAC6-209ENST00000440653 A0A087WSZ3 146 aa5.58□□□□□ -1.52
HDAC6-209ENST00000440653 KLKP1Q107X0 134 aa5.58□□□□□ -1.52
HDAC6-209ENST00000440653 PSORS1C2Q9UIG4 136 aa5.58□□□□□ -1.52
HDAC6-209ENST00000440653 FAT4Q6V0I7 4981 aa5.57□□□□□ -1.52
HDAC6-209ENST00000440653 J3KT08 172 aa5.57□□□□□ -1.52
HDAC6-209ENST00000440653 NDUFC1O43677 76 aa5.57□□□□□ -1.52
HDAC6-209ENST00000440653 ZNF861PO60384 105 aa5.57□□□□□ -1.52
HDAC6-209ENST00000440653 DSCR10P59022 87 aa5.55□□□□□ -1.52
HDAC6-209ENST00000440653 Q8N9L7 120 aa5.55□□□□□ -1.52
HDAC6-209ENST00000440653 HCG22E2RYF7 251 aa5.54□□□□□ -1.52
HDAC6-209ENST00000440653 ATP5EP56381 51 aaPredicted RBP5.54□□□□□ -1.52
HDAC6-209ENST00000440653 C20orf197Q8N268 126 aa5.54□□□□□ -1.52
HDAC6-209ENST00000440653 OCR1Q9BZK8 76 aa5.54□□□□□ -1.52
HDAC6-209ENST00000440653 MUC2Q02817 5179 aa5.53□□□□□ -1.52
HDAC6-209ENST00000440653 K7EQZ3 153 aa5.53□□□□□ -1.52
HDAC6-209ENST00000440653 IGLV7-43P04211 117 aa5.53□□□□□ -1.52
HDAC6-209ENST00000440653 Q6ZSA8 131 aa5.53□□□□□ -1.52
HDAC6-209ENST00000440653 A8MWP4 228 aa5.52□□□□□ -1.53
HDAC6-209ENST00000440653 TMEM254Q8TBM7 123 aa5.51□□□□□ -1.53
HDAC6-209ENST00000440653 IGLV9-49A0A0B4J1Y8 123 aa5.5□□□□□ -1.53
HDAC6-209ENST00000440653 FAM229AH3BQW9 127 aa5.5□□□□□ -1.53
HDAC6-209ENST00000440653 LINC00472Q9H8W2 130 aa5.5□□□□□ -1.53
HDAC6-209ENST00000440653 FAM236DA0A1B0GTK5 79 aa5.49□□□□□ -1.53
HDAC6-209ENST00000440653 NDUFB1O75438 58 aa5.49□□□□□ -1.53
Retrieved 100 of 20,778 RNA–protein pairs in 57 ms