RNA–Protein interactions for RNA: ENST00000439120.1

AC004540.1-201, humanhuman

TSL 2 BASIC

Gene AC004540.1, Length 891 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC004540.1-201ENST00000439120 RPL37P61927 97 aaKnown RBP9.91□□□□□ -0.82
AC004540.1-201ENST00000439120 CLEC2BQ92478 149 aa9.9□□□□□ -0.82
AC004540.1-201ENST00000439120 HIST1H4GQ99525 98 aa9.9□□□□□ -0.82
AC004540.1-201ENST00000439120 C12orf57Q99622 126 aa9.89□□□□□ -0.83
AC004540.1-201ENST00000439120 KRTAP19-2Q3LHN2 52 aa9.88□□□□□ -0.83
AC004540.1-201ENST00000439120 BVES-AS1Q5T3Y7 98 aa9.88□□□□□ -0.83
AC004540.1-201ENST00000439120 SCGB1D1O95968 90 aa9.87□□□□□ -0.83
AC004540.1-201ENST00000439120 LCE2DQ5TA82 110 aaPredicted RBP9.87□□□□□ -0.83
AC004540.1-201ENST00000439120 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP9.87□□□□□ -0.83
AC004540.1-201ENST00000439120 MT1HP80294 61 aa9.86□□□□□ -0.83
AC004540.1-201ENST00000439120 OCIAD2Q56VL3 154 aa9.86□□□□□ -0.83
AC004540.1-201ENST00000439120 IGFL1Q6UW32 110 aa9.86□□□□□ -0.83
AC004540.1-201ENST00000439120 TRBV7-7A0A0K0K1E9 115 aa9.85□□□□□ -0.83
AC004540.1-201ENST00000439120 CFC1BP0CG36 223 aa9.85□□□□□ -0.83
AC004540.1-201ENST00000439120 SNHG12Q9BXW3 62 aa9.85□□□□□ -0.83
AC004540.1-201ENST00000439120 PPDPFLQ8WWR9 84 aa9.84□□□□□ -0.83
AC004540.1-201ENST00000439120 COX6B2Q6YFQ2 88 aa9.82□□□□□ -0.84
AC004540.1-201ENST00000439120 SNCGO76070 127 aa9.81□□□□□ -0.84
AC004540.1-201ENST00000439120 COX8AP10176 69 aa9.81□□□□□ -0.84
AC004540.1-201ENST00000439120 RAB37Q96AX2 223 aa9.79□□□□□ -0.84
AC004540.1-201ENST00000439120 M0R2T5 61 aa9.78□□□□□ -0.84
AC004540.1-201ENST00000439120 H3BUT2 72 aa9.77□□□□□ -0.85
AC004540.1-201ENST00000439120 DLEU1O43261 78 aa9.77□□□□□ -0.85
AC004540.1-201ENST00000439120 OBSCN-AS1Q96MR7 158 aa9.77□□□□□ -0.85
AC004540.1-201ENST00000439120 LST1O00453 97 aa9.76□□□□□ -0.85
AC004540.1-201ENST00000439120 ATP11AUNQ6ZP68 121 aa9.75□□□□□ -0.85
AC004540.1-201ENST00000439120 CFC1P0CG37 223 aa9.74□□□□□ -0.85
AC004540.1-201ENST00000439120 SS18L2Q9UHA2 77 aa9.74□□□□□ -0.85
AC004540.1-201ENST00000439120 LOC105371267A0A1B0GV96 52 aa9.73□□□□□ -0.85
AC004540.1-201ENST00000439120 C14orf144Q96I85 54 aa9.73□□□□□ -0.85
AC004540.1-201ENST00000439120 H0YGX0 51 aa9.72□□□□□ -0.85
AC004540.1-201ENST00000439120 Q75L30 129 aa9.71□□□□□ -0.86
AC004540.1-201ENST00000439120 PAM16Q9Y3D7 125 aa9.71□□□□□ -0.86
AC004540.1-201ENST00000439120 FSIP2Q5CZC0 6907 aa9.7□□□□□ -0.86
AC004540.1-201ENST00000439120 A0A0B4J2C4 111 aa9.7□□□□□ -0.86
AC004540.1-201ENST00000439120 KRTAP10-6P60371 365 aaPredicted RBP9.7□□□□□ -0.86
AC004540.1-201ENST00000439120 SPATA45Q537H7 98 aa9.7□□□□□ -0.86
AC004540.1-201ENST00000439120 HIGD1BQ9P298 99 aa9.7□□□□□ -0.86
AC004540.1-201ENST00000439120 CRCT1Q9UGL9 99 aa9.7□□□□□ -0.86
AC004540.1-201ENST00000439120 NDUFV3P56181 108 aaKnown RBP9.69□□□□□ -0.86
AC004540.1-201ENST00000439120 GHRHP01286 108 aa9.68□□□□□ -0.86
AC004540.1-201ENST00000439120 LORP23490 312 aaPredicted RBP9.68□□□□□ -0.86
AC004540.1-201ENST00000439120 TEN1Q86WV5 123 aa9.68□□□□□ -0.86
AC004540.1-201ENST00000439120 Q96NJ1 140 aa9.68□□□□□ -0.86
AC004540.1-201ENST00000439120 VAMP8Q9BV40 100 aa9.68□□□□□ -0.86
AC004540.1-201ENST00000439120 Q6Q795 121 aa9.67□□□□□ -0.86
AC004540.1-201ENST00000439120 FAM218AQ96MZ4 157 aa9.66□□□□□ -0.86
AC004540.1-201ENST00000439120 TMEM238LA0A1B0GVL6 79 aa9.65□□□□□ -0.86
AC004540.1-201ENST00000439120 A6NJY4 79 aa9.65□□□□□ -0.86
AC004540.1-201ENST00000439120 FABP2P12104 132 aa9.64□□□□□ -0.87
AC004540.1-201ENST00000439120 TMA7Q9Y2S6 64 aaKnown RBP9.64□□□□□ -0.87
AC004540.1-201ENST00000439120 A0A087WSZ3 146 aa9.63□□□□□ -0.87
AC004540.1-201ENST00000439120 H3BMG7 143 aa9.63□□□□□ -0.87
AC004540.1-201ENST00000439120 C2orf91Q6ZV80 131 aa9.63□□□□□ -0.87
AC004540.1-201ENST00000439120 CEND1Q8N111 149 aa9.63□□□□□ -0.87
AC004540.1-201ENST00000439120 PRO1854Q9UHT4 67 aa9.63□□□□□ -0.87
AC004540.1-201ENST00000439120 A0A1B0GX51 115 aa9.62□□□□□ -0.87
AC004540.1-201ENST00000439120 FLGP20930 4061 aaPredicted RBP9.57□□□□□ -0.88
AC004540.1-201ENST00000439120 C20orf166-AS1Q96NR2 134 aa9.57□□□□□ -0.88
AC004540.1-201ENST00000439120 SIGMAR1Q99720 223 aa9.56□□□□□ -0.88
AC004540.1-201ENST00000439120 TRIAP1O43715 76 aa9.55□□□□□ -0.88
AC004540.1-201ENST00000439120 DNAL4O96015 105 aa9.55□□□□□ -0.88
AC004540.1-201ENST00000439120 FXYD2P54710 66 aa9.55□□□□□ -0.88
AC004540.1-201ENST00000439120 A8MUU9 505 aa9.54□□□□□ -0.88
AC004540.1-201ENST00000439120 TRBV20-1A0A075B6N2 111 aa9.52□□□□□ -0.89
AC004540.1-201ENST00000439120 PSMB2P49721 201 aa9.52□□□□□ -0.89
AC004540.1-201ENST00000439120 DSCR10P59022 87 aa9.52□□□□□ -0.89
AC004540.1-201ENST00000439120 ANKRD29Q8N6D5 301 aa9.52□□□□□ -0.89
AC004540.1-201ENST00000439120 ORMDL1Q9P0S3 153 aa9.52□□□□□ -0.89
AC004540.1-201ENST00000439120 A0A1W2PNM2 257 aa9.51□□□□□ -0.89
AC004540.1-201ENST00000439120 A0A1B0GV72 72 aa9.5□□□□□ -0.89
AC004540.1-201ENST00000439120 H3BQ85 93 aa9.5□□□□□ -0.89
AC004540.1-201ENST00000439120 IGKV4-1P06312 121 aa9.48□□□□□ -0.89
AC004540.1-201ENST00000439120 COX6CP09669 75 aa9.48□□□□□ -0.89
AC004540.1-201ENST00000439120 HSD52Q0P140 79 aa9.48□□□□□ -0.89
AC004540.1-201ENST00000439120 TRBV7-4A0A0J9YYF1 115 aa9.47□□□□□ -0.89
AC004540.1-201ENST00000439120 LINC00313P59037 77 aa9.47□□□□□ -0.89
AC004540.1-201ENST00000439120 TMEM256-PLSCR3K7ERE1 68 aa9.46□□□□□ -0.9
AC004540.1-201ENST00000439120 K7ERJ3 54 aa9.45□□□□□ -0.9
AC004540.1-201ENST00000439120 TRACP01848 142 aa9.43□□□□□ -0.9
AC004540.1-201ENST00000439120 CCKP06307 115 aa9.42□□□□□ -0.9
AC004540.1-201ENST00000439120 FAM236DA0A1B0GTK5 79 aa9.39□□□□□ -0.91
AC004540.1-201ENST00000439120 FAM236CP0DP71 79 aa9.39□□□□□ -0.91
AC004540.1-201ENST00000439120 DEFB116Q30KQ4 102 aa9.39□□□□□ -0.91
AC004540.1-201ENST00000439120 PYY3Q5JQD4 70 aa9.39□□□□□ -0.91
AC004540.1-201ENST00000439120 IGHV6-1A0A0B4J1U7 121 aa9.37□□□□□ -0.91
AC004540.1-201ENST00000439120 UBE2V1Q13404 147 aa9.37□□□□□ -0.91
AC004540.1-201ENST00000439120 VPS25Q9BRG1 176 aa9.37□□□□□ -0.91
AC004540.1-201ENST00000439120 KRTAP16-1A8MUX0 517 aa9.36□□□□□ -0.91
AC004540.1-201ENST00000439120 LINC00472Q9H8W2 130 aa9.36□□□□□ -0.91
AC004540.1-201ENST00000439120 SCGB1C2P0DMR2 95 aa9.35□□□□□ -0.91
AC004540.1-201ENST00000439120 UQCR10Q9UDW1 63 aa9.35□□□□□ -0.91
AC004540.1-201ENST00000439120 NOTCH2NLQ7Z3S9 236 aa9.33□□□□□ -0.92
AC004540.1-201ENST00000439120 RBM12B-AS1Q9P1G2 102 aa9.33□□□□□ -0.92
AC004540.1-201ENST00000439120 DSCR8Q96T75 97 aa9.32□□□□□ -0.92
AC004540.1-201ENST00000439120 RBM3P98179 157 aaKnown RBP9.31□□□□□ -0.92
AC004540.1-201ENST00000439120 SMIM6P0DI80 62 aa9.29□□□□□ -0.92
AC004540.1-201ENST00000439120 A0A1B0GVX0 72 aa9.28□□□□□ -0.92
AC004540.1-201ENST00000439120 C8orf87E5RJ46 101 aa9.28□□□□□ -0.92
AC004540.1-201ENST00000439120 KRTAP9-8Q9BYQ0 159 aa9.28□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 60.4 ms