RNA–Protein interactions for RNA: ENST00000438862.6

CSTF3-203, Transcript of cleavage stimulation factor subunit 3, humanhuman

TSL 1 (best) BASIC

Gene CSTF3, Length 1,132 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSTF3-203ENST00000438862 RPL37AP8A6NKH3 93 aa6.35□□□□□ -1.39
CSTF3-203ENST00000438862 HINT1P49773 126 aaPredicted RBP6.35□□□□□ -1.39
CSTF3-203ENST00000438862 NHP2Q9NX24 153 aaKnown RBP6.35□□□□□ -1.39
CSTF3-203ENST00000438862 ANAPC11Q9NYG5 84 aa6.34□□□□□ -1.39
CSTF3-203ENST00000438862 KRTAP4-16G5E9R7 235 aaPredicted RBP6.33□□□□□ -1.4
CSTF3-203ENST00000438862 ZNF73O43830 326 aaPredicted RBP6.33□□□□□ -1.4
CSTF3-203ENST00000438862 BCE1O60756 84 aa6.33□□□□□ -1.4
CSTF3-203ENST00000438862 MT1HP80294 61 aa6.33□□□□□ -1.4
CSTF3-203ENST00000438862 KRTAP13-3Q3SY46 172 aa6.33□□□□□ -1.4
CSTF3-203ENST00000438862 VAMP3Q15836 100 aa6.31□□□□□ -1.4
CSTF3-203ENST00000438862 SMIM11BQ8TCY0 68 aa6.31□□□□□ -1.4
CSTF3-203ENST00000438862 ETDCA0A1B0GVM5 59 aa6.3□□□□□ -1.4
CSTF3-203ENST00000438862 C6orf99Q4VX62 202 aa6.3□□□□□ -1.4
CSTF3-203ENST00000438862 SPAG11AQ6PDA7 123 aa6.3□□□□□ -1.4
CSTF3-203ENST00000438862 PCP4L1A6NKN8 68 aa6.29□□□□□ -1.4
CSTF3-203ENST00000438862 B5MCH6 92 aa6.29□□□□□ -1.4
CSTF3-203ENST00000438862 H0YGX0 51 aa6.29□□□□□ -1.4
CSTF3-203ENST00000438862 COX6CP09669 75 aa6.29□□□□□ -1.4
CSTF3-203ENST00000438862 ELOF1P60002 83 aaKnown RBP6.29□□□□□ -1.4
CSTF3-203ENST00000438862 KRTAP10-6P60371 365 aaPredicted RBP6.29□□□□□ -1.4
CSTF3-203ENST00000438862 KRTAP13-1Q8IUC0 172 aa6.29□□□□□ -1.4
CSTF3-203ENST00000438862 SNHG12Q9BXW3 62 aa6.29□□□□□ -1.4
CSTF3-203ENST00000438862 KRTAP23-1A1A580 65 aa6.28□□□□□ -1.4
CSTF3-203ENST00000438862 Q1RN00 199 aa6.28□□□□□ -1.4
CSTF3-203ENST00000438862 Q6ZRX8 168 aa6.28□□□□□ -1.4
CSTF3-203ENST00000438862 FAM19A1Q7Z5A9 133 aa6.28□□□□□ -1.4
CSTF3-203ENST00000438862 K7ERJ3 54 aa6.27□□□□□ -1.41
CSTF3-203ENST00000438862 COX7BP24311 80 aa6.27□□□□□ -1.41
CSTF3-203ENST00000438862 UBE2AP49459 152 aa6.27□□□□□ -1.41
CSTF3-203ENST00000438862 BATFQ16520 125 aa6.27□□□□□ -1.41
CSTF3-203ENST00000438862 KRTAP19-2Q3LHN2 52 aa6.27□□□□□ -1.41
CSTF3-203ENST00000438862 COL5A1-AS1Q5SY13 56 aa6.27□□□□□ -1.41
CSTF3-203ENST00000438862 DHRS4-AS1Q9P1J3 65 aa6.27□□□□□ -1.41
CSTF3-203ENST00000438862 A0A1B0GX51 115 aa6.26□□□□□ -1.41
CSTF3-203ENST00000438862 H7C2G1 150 aa6.26□□□□□ -1.41
CSTF3-203ENST00000438862 SNCGO76070 127 aa6.26□□□□□ -1.41
CSTF3-203ENST00000438862 PSMB2P49721 201 aa6.25□□□□□ -1.41
CSTF3-203ENST00000438862 TRIAP1O43715 76 aa6.24□□□□□ -1.41
CSTF3-203ENST00000438862 SLC25A20O43772 301 aa6.24□□□□□ -1.41
CSTF3-203ENST00000438862 LYRM7Q5U5X0 104 aa6.24□□□□□ -1.41
CSTF3-203ENST00000438862 TAX1BP3O14907 124 aa6.23□□□□□ -1.41
CSTF3-203ENST00000438862 PRLHP81277 87 aa6.23□□□□□ -1.41
CSTF3-203ENST00000438862 LINC00575Q6W349 94 aa6.23□□□□□ -1.41
CSTF3-203ENST00000438862 Q9BRP9 147 aa6.23□□□□□ -1.41
CSTF3-203ENST00000438862 SMCR5Q8TEV8 140 aa6.22□□□□□ -1.41
CSTF3-203ENST00000438862 HIGD2AQ9BW72 106 aa6.22□□□□□ -1.41
CSTF3-203ENST00000438862 hADV29S1A0JD25 119 aa6.21□□□□□ -1.42
CSTF3-203ENST00000438862 SCGB1C2P0DMR2 95 aa6.21□□□□□ -1.42
CSTF3-203ENST00000438862 ZNF706Q9Y5V0 76 aaPredicted RBP6.21□□□□□ -1.42
CSTF3-203ENST00000438862 TRBV20-1A0A075B6N2 111 aa6.2□□□□□ -1.42
CSTF3-203ENST00000438862 M0R2T5 61 aa6.2□□□□□ -1.42
CSTF3-203ENST00000438862 OCIAD2Q56VL3 154 aa6.2□□□□□ -1.42
CSTF3-203ENST00000438862 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP6.2□□□□□ -1.42
CSTF3-203ENST00000438862 H3BQ85 93 aa6.19□□□□□ -1.42
CSTF3-203ENST00000438862 H3BUT2 72 aa6.19□□□□□ -1.42
CSTF3-203ENST00000438862 C3orf22Q8N5N4 141 aa6.19□□□□□ -1.42
CSTF3-203ENST00000438862 A0A1W2PPM0 123 aa6.18□□□□□ -1.42
CSTF3-203ENST00000438862 TRACP01848 142 aa6.18□□□□□ -1.42
CSTF3-203ENST00000438862 PPDPFLQ8WWR9 84 aa6.18□□□□□ -1.42
CSTF3-203ENST00000438862 IGLV5-48A0A075B6I7 105 aa6.17□□□□□ -1.42
CSTF3-203ENST00000438862 LST1O00453 97 aa6.17□□□□□ -1.42
CSTF3-203ENST00000438862 ERC2-IT1O76042 136 aa6.17□□□□□ -1.42
CSTF3-203ENST00000438862 FABP2P12104 132 aa6.17□□□□□ -1.42
CSTF3-203ENST00000438862 SPRR1BP22528 89 aa6.17□□□□□ -1.42
CSTF3-203ENST00000438862 FAM218AQ96MZ4 157 aa6.17□□□□□ -1.42
CSTF3-203ENST00000438862 DNAL4O96015 105 aa6.16□□□□□ -1.42
CSTF3-203ENST00000438862 SPINK1P00995 79 aa6.16□□□□□ -1.42
CSTF3-203ENST00000438862 ATXN8Q156A1 80 aa6.16□□□□□ -1.42
CSTF3-203ENST00000438862 LINC00483Q53H64 154 aa6.16□□□□□ -1.42
CSTF3-203ENST00000438862 SPRR4Q96PI1 79 aa6.16□□□□□ -1.42
CSTF3-203ENST00000438862 TEX49A0A1B0GTD5 131 aa6.15□□□□□ -1.42
CSTF3-203ENST00000438862 Q6ZQY7 126 aa6.15□□□□□ -1.42
CSTF3-203ENST00000438862 CLEC2BQ92478 149 aa6.15□□□□□ -1.42
CSTF3-203ENST00000438862 TCL1BO95988 128 aa6.14□□□□□ -1.43
CSTF3-203ENST00000438862 NAA38Q9BRA0 125 aaKnown RBP6.14□□□□□ -1.43
CSTF3-203ENST00000438862 IGLV8-61A0A075B6I0 122 aa6.12□□□□□ -1.43
CSTF3-203ENST00000438862 TMEM256-PLSCR3K7ERE1 68 aa6.12□□□□□ -1.43
CSTF3-203ENST00000438862 GAGE2AQ6NT46 116 aa6.12□□□□□ -1.43
CSTF3-203ENST00000438862 Q8N377 158 aa6.12□□□□□ -1.43
CSTF3-203ENST00000438862 ST20-AS1Q8NBB2 130 aa6.12□□□□□ -1.43
CSTF3-203ENST00000438862 ORMDL1Q9P0S3 153 aa6.12□□□□□ -1.43
CSTF3-203ENST00000438862 Q8NBF4 154 aa6.11□□□□□ -1.43
CSTF3-203ENST00000438862 LAMTOR3Q9UHA4 124 aa6.11□□□□□ -1.43
CSTF3-203ENST00000438862 SPCS1Q9Y6A9 102 aa6.11□□□□□ -1.43
CSTF3-203ENST00000438862 C21orf62-AS1Q17RA5 79 aa6.1□□□□□ -1.43
CSTF3-203ENST00000438862 GTF2H5Q6ZYL4 71 aa6.1□□□□□ -1.43
CSTF3-203ENST00000438862 RPS29P62273 56 aaKnown RBP6.09□□□□□ -1.43
CSTF3-203ENST00000438862 UBE2V1Q13404 147 aa6.09□□□□□ -1.43
CSTF3-203ENST00000438862 PCOTHQ58A44 107 aa6.09□□□□□ -1.43
CSTF3-203ENST00000438862 DEFB105AQ8NG35 78 aa6.09□□□□□ -1.43
CSTF3-203ENST00000438862 K7EP34 96 aa6.08□□□□□ -1.44
CSTF3-203ENST00000438862 BAALC-AS2P0C853 105 aa6.08□□□□□ -1.44
CSTF3-203ENST00000438862 SSBP3-AS1Q7Z2R9 100 aa6.08□□□□□ -1.44
CSTF3-203ENST00000438862 SMIM29Q86T20 159 aa6.08□□□□□ -1.44
CSTF3-203ENST00000438862 SSPOA2VEC9 5147 aa6.07□□□□□ -1.44
CSTF3-203ENST00000438862 H3BMG7 143 aa6.07□□□□□ -1.44
CSTF3-203ENST00000438862 H3BT86 120 aa6.07□□□□□ -1.44
CSTF3-203ENST00000438862 C9JAW5 83 aa6.06□□□□□ -1.44
CSTF3-203ENST00000438862 NDUFV3P56181 108 aaKnown RBP6.06□□□□□ -1.44
CSTF3-203ENST00000438862 COX6B2Q6YFQ2 88 aa6.06□□□□□ -1.44
Retrieved 100 of 20,778 RNA–protein pairs in 143.5 ms