RNA–Protein interactions for RNA: ENST00000438661.2

KCNC4-204, Transcript of potassium voltage-gated channel subfamily C member 4, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene KCNC4, Length 2,953 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KCNC4-204ENST00000438661 LINC00588Q9Y4M8 146 aa11.51□□□□□ -0.57
KCNC4-204ENST00000438661 LIMD2Q9BT23 127 aa11.5□□□□□ -0.57
KCNC4-204ENST00000438661 TENM3Q9P273 2699 aa11.49□□□□□ -0.57
KCNC4-204ENST00000438661 LCA10Q71F78 164 aa11.49□□□□□ -0.57
KCNC4-204ENST00000438661 RBM12B-AS1Q9P1G2 102 aa11.49□□□□□ -0.57
KCNC4-204ENST00000438661 KTN1-AS1Q86SY8 53 aa11.48□□□□□ -0.57
KCNC4-204ENST00000438661 CASC2Q6XLA1 102 aa11.48□□□□□ -0.57
KCNC4-204ENST00000438661 KRTAP7-1Q8IUC3 87 aa11.46□□□□□ -0.57
KCNC4-204ENST00000438661 PRLHP81277 87 aa11.46□□□□□ -0.58
KCNC4-204ENST00000438661 FBN1P35555 2871 aaKnown RBP11.46□□□□□ -0.58
KCNC4-204ENST00000438661 CASC10Q5T4H9 136 aa11.45□□□□□ -0.58
KCNC4-204ENST00000438661 SPRR1AP35321 89 aa11.45□□□□□ -0.58
KCNC4-204ENST00000438661 OXLD1Q5BKU9 147 aa11.44□□□□□ -0.58
KCNC4-204ENST00000438661 PCOTHQ58A44 107 aa11.43□□□□□ -0.58
KCNC4-204ENST00000438661 A0A096LNI7 61 aa11.42□□□□□ -0.58
KCNC4-204ENST00000438661 COA5Q86WW8 74 aa11.42□□□□□ -0.58
KCNC4-204ENST00000438661 REG3GQ6UW15 175 aa11.41□□□□□ -0.58
KCNC4-204ENST00000438661 ANK2Q01484 3957 aa11.41□□□□□ -0.58
KCNC4-204ENST00000438661 FLNBO75369 2602 aaKnown RBP11.4□□□□□ -0.58
KCNC4-204ENST00000438661 SPAG11AQ6PDA7 123 aa11.4□□□□□ -0.58
KCNC4-204ENST00000438661 CSMD3Q7Z407 3707 aa11.4□□□□□ -0.59
KCNC4-204ENST00000438661 SPANXA2-OT1Q8N9U9 137 aa11.4□□□□□ -0.59
KCNC4-204ENST00000438661 KRTAP29-1A8MX34 341 aaPredicted RBP11.39□□□□□ -0.59
KCNC4-204ENST00000438661 ATP11AUNQ6ZP68 121 aa11.39□□□□□ -0.59
KCNC4-204ENST00000438661 H0Y9J4 135 aa11.38□□□□□ -0.59
KCNC4-204ENST00000438661 H3BNG1 76 aa11.38□□□□□ -0.59
KCNC4-204ENST00000438661 KRTAP10-11P60412 298 aa11.38□□□□□ -0.59
KCNC4-204ENST00000438661 CNBPP62633 177 aaKnown RBP11.37□□□□□ -0.59
KCNC4-204ENST00000438661 LINC01556Q5JQF7 62 aa11.37□□□□□ -0.59
KCNC4-204ENST00000438661 IGKV2-24A0A0C4DH68 120 aa11.36□□□□□ -0.59
KCNC4-204ENST00000438661 Q75L30 129 aa11.35□□□□□ -0.59
KCNC4-204ENST00000438661 PLA2G2DQ9UNK4 145 aa11.35□□□□□ -0.59
KCNC4-204ENST00000438661 TLX1NBP0CAT3 122 aa11.34□□□□□ -0.59
KCNC4-204ENST00000438661 KMT2BQ9UMN6 2715 aaPredicted RBP11.33□□□□□ -0.6
KCNC4-204ENST00000438661 DEFB131BA0A096LNP1 70 aa11.33□□□□□ -0.6
KCNC4-204ENST00000438661 C9orf163Q8N9P6 203 aa11.33□□□□□ -0.6
KCNC4-204ENST00000438661 IGLV5-37A0A075B6J1 123 aa11.31□□□□□ -0.6
KCNC4-204ENST00000438661 A6NN06 94 aa11.31□□□□□ -0.6
KCNC4-204ENST00000438661 LOC101927531A0A1B0GV80 90 aa11.3□□□□□ -0.6
KCNC4-204ENST00000438661 MAST4O15021 2626 aa11.3□□□□□ -0.6
KCNC4-204ENST00000438661 H3BPC8 53 aa11.29□□□□□ -0.6
KCNC4-204ENST00000438661 COL7A1Q02388 2944 aa11.29□□□□□ -0.6
KCNC4-204ENST00000438661 NDUFS5O43920 106 aa11.28□□□□□ -0.6
KCNC4-204ENST00000438661 A8MWP4 228 aa11.28□□□□□ -0.6
KCNC4-204ENST00000438661 C11orf45Q8TAV5 145 aa11.28□□□□□ -0.6
KCNC4-204ENST00000438661 CDC42SE1Q9NRR8 79 aa11.27□□□□□ -0.61
KCNC4-204ENST00000438661 NOTCH1P46531 2555 aa11.27□□□□□ -0.61
KCNC4-204ENST00000438661 COL6A5A8TX70 2615 aa11.26□□□□□ -0.61
KCNC4-204ENST00000438661 MOBPQ13875 183 aa11.25□□□□□ -0.61
KCNC4-204ENST00000438661 IGLV7-46A0A075B6I9 117 aa11.25□□□□□ -0.61
KCNC4-204ENST00000438661 SPINK7P58062 85 aa11.24□□□□□ -0.61
KCNC4-204ENST00000438661 STAB1Q9NY15 2570 aa11.24□□□□□ -0.61
KCNC4-204ENST00000438661 PHF5AQ7RTV0 110 aaKnown RBP11.23□□□□□ -0.61
KCNC4-204ENST00000438661 DNAH10OSP0CZ25 163 aa11.22□□□□□ -0.61
KCNC4-204ENST00000438661 LINC00472Q9H8W2 130 aa11.22□□□□□ -0.61
KCNC4-204ENST00000438661 C7orf65Q6ZTY9 151 aa11.2□□□□□ -0.62
KCNC4-204ENST00000438661 TENM2Q9NT68 2774 aa11.2□□□□□ -0.62
KCNC4-204ENST00000438661 MMP24-AS1A0A0U1RRL7 71 aa11.19□□□□□ -0.62
KCNC4-204ENST00000438661 IGLV8-61A0A075B6I0 122 aa11.18□□□□□ -0.62
KCNC4-204ENST00000438661 CMYA5Q8N3K9 4069 aa11.16□□□□□ -0.62
KCNC4-204ENST00000438661 LINC01558Q9Y6Z2 57 aa11.16□□□□□ -0.62
KCNC4-204ENST00000438661 KRTAP11-1Q8IUC1 163 aa11.14□□□□□ -0.63
KCNC4-204ENST00000438661 CHTF8P0CG12 524 aa11.13□□□□□ -0.63
KCNC4-204ENST00000438661 NBEAL1Q6ZS30 2694 aa11.12□□□□□ -0.63
KCNC4-204ENST00000438661 HRES1P13985 223 aa11.12□□□□□ -0.63
KCNC4-204ENST00000438661 PRAC1Q96KF2 57 aa11.11□□□□□ -0.63
KCNC4-204ENST00000438661 DNAH1Q9P2D7 4330 aa11.1□□□□□ -0.63
KCNC4-204ENST00000438661 IGHV6-1A0A0B4J1U7 121 aa11.09□□□□□ -0.63
KCNC4-204ENST00000438661 PRR26Q8N8Z3 221 aa11.09□□□□□ -0.63
KCNC4-204ENST00000438661 IGLV9-49A0A0B4J1Y8 123 aa11.08□□□□□ -0.64
KCNC4-204ENST00000438661 KRTAP24-1Q3LI83 254 aa11.07□□□□□ -0.64
KCNC4-204ENST00000438661 DNAH10Q8IVF4 4471 aa11.06□□□□□ -0.64
KCNC4-204ENST00000438661 LINC00313P59037 77 aa11.04□□□□□ -0.64
KCNC4-204ENST00000438661 PLAC8Q9NZF1 115 aa11.04□□□□□ -0.64
KCNC4-204ENST00000438661 ADM2Q7Z4H4 148 aa11.03□□□□□ -0.64
KCNC4-204ENST00000438661 DNAH3Q8TD57 4116 aa11.03□□□□□ -0.64
KCNC4-204ENST00000438661 LYSTQ99698 3801 aa11.02□□□□□ -0.64
KCNC4-204ENST00000438661 TP53AIP1Q9HCN2 124 aa11.01□□□□□ -0.65
KCNC4-204ENST00000438661 K7EIL1 84 aa11.01□□□□□ -0.65
KCNC4-204ENST00000438661 C8orf17Q9NRJ1 99 aa11.01□□□□□ -0.65
KCNC4-204ENST00000438661 C8orf87E5RJ46 101 aa10.99□□□□□ -0.65
KCNC4-204ENST00000438661 HUWE1Q7Z6Z7 4374 aaKnown RBP10.95□□□□□ -0.66
KCNC4-204ENST00000438661 A0A087X002 238 aa10.95□□□□□ -0.66
KCNC4-204ENST00000438661 SPRR1BP22528 89 aa10.95□□□□□ -0.66
KCNC4-204ENST00000438661 Q6ZR54 194 aa10.95□□□□□ -0.66
KCNC4-204ENST00000438661 NOTCH2NLQ7Z3S9 236 aa10.95□□□□□ -0.66
KCNC4-204ENST00000438661 Q96NJ1 140 aa10.95□□□□□ -0.66
KCNC4-204ENST00000438661 CDK2AP2O75956 126 aa10.95□□□□□ -0.66
KCNC4-204ENST00000438661 KRTAP1-5Q9BYS1 174 aa10.95□□□□□ -0.66
KCNC4-204ENST00000438661 C4orf48Q5BLP8 95 aa10.91□□□□□ -0.66
KCNC4-204ENST00000438661 DNAH9Q9NYC9 4486 aa10.9□□□□□ -0.66
KCNC4-204ENST00000438661 MRPL34Q9BQ48 92 aaKnown RBP10.9□□□□□ -0.66
KCNC4-204ENST00000438661 A0A1B0GVX0 72 aa10.89□□□□□ -0.67
KCNC4-204ENST00000438661 SPINK6Q6UWN8 80 aa10.89□□□□□ -0.67
KCNC4-204ENST00000438661 ASB16-AS1Q495Z4 193 aa10.88□□□□□ -0.67
KCNC4-204ENST00000438661 STAB2Q8WWQ8 2551 aa10.87□□□□□ -0.67
KCNC4-204ENST00000438661 ANAPC11Q9NYG5 84 aa10.87□□□□□ -0.67
KCNC4-204ENST00000438661 MDFIQ99750 246 aa10.86□□□□□ -0.67
KCNC4-204ENST00000438661 Q5W150 140 aa10.85□□□□□ -0.67
KCNC4-204ENST00000438661 PANO1I0J062 215 aa10.83□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 59.5 ms