RNA–Protein interactions for RNA: ENST00000438362.6

CSDE1-205, Transcript of cold shock domain containing E1, humanhuman

TSL 1 (best) BASIC

Gene CSDE1, Length 4,167 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSDE1-205ENST00000438362 DSCR10P59022 87 aa4.27□□□□□ -1.73
CSDE1-205ENST00000438362 Q5XG85 94 aa4.27□□□□□ -1.73
CSDE1-205ENST00000438362 C1orf134Q5TEV5 83 aa4.27□□□□□ -1.73
CSDE1-205ENST00000438362 C9orf163Q8N9P6 203 aa4.26□□□□□ -1.73
CSDE1-205ENST00000438362 SPAG11AQ6PDA7 123 aa4.26□□□□□ -1.73
CSDE1-205ENST00000438362 OXTP01178 125 aa4.26□□□□□ -1.73
CSDE1-205ENST00000438362 CNBPP62633 177 aaKnown RBP4.26□□□□□ -1.73
CSDE1-205ENST00000438362 TNP2Q05952 138 aa4.26□□□□□ -1.73
CSDE1-205ENST00000438362 KRTAP26-1Q6PEX3 210 aa4.26□□□□□ -1.73
CSDE1-205ENST00000438362 KMT2BQ9UMN6 2715 aaPredicted RBP4.26□□□□□ -1.73
CSDE1-205ENST00000438362 SPRR1AP35321 89 aa4.25□□□□□ -1.73
CSDE1-205ENST00000438362 RETNLBQ9BQ08 111 aa4.25□□□□□ -1.73
CSDE1-205ENST00000438362 COL6A5A8TX70 2615 aa4.25□□□□□ -1.73
CSDE1-205ENST00000438362 COA5Q86WW8 74 aa4.24□□□□□ -1.73
CSDE1-205ENST00000438362 ASPMQ8IZT6 3477 aa4.24□□□□□ -1.73
CSDE1-205ENST00000438362 ITPR2Q14571 2701 aa4.24□□□□□ -1.73
CSDE1-205ENST00000438362 RTL8CO15255 209 aa4.24□□□□□ -1.73
CSDE1-205ENST00000438362 MRPL34Q9BQ48 92 aaKnown RBP4.24□□□□□ -1.73
CSDE1-205ENST00000438362 FP248Q71RG6 208 aaPredicted RBP4.24□□□□□ -1.73
CSDE1-205ENST00000438362 C8orf17Q9NRJ1 99 aa4.24□□□□□ -1.73
CSDE1-205ENST00000438362 BSNQ9UPA5 3926 aa4.23□□□□□ -1.73
CSDE1-205ENST00000438362 NF1P21359 2839 aa4.23□□□□□ -1.73
CSDE1-205ENST00000438362 STAB1Q9NY15 2570 aa4.23□□□□□ -1.73
CSDE1-205ENST00000438362 ACYP2P14621 99 aa4.23□□□□□ -1.73
CSDE1-205ENST00000438362 FBN2P35556 2912 aa4.23□□□□□ -1.73
CSDE1-205ENST00000438362 DCHS2Q6V1P9 2916 aa4.22□□□□□ -1.73
CSDE1-205ENST00000438362 SPANXA2-OT1Q8N9U9 137 aa4.22□□□□□ -1.73
CSDE1-205ENST00000438362 CYP4F30PQ9H0H9 118 aa4.22□□□□□ -1.73
CSDE1-205ENST00000438362 APCP25054 2843 aa4.22□□□□□ -1.73
CSDE1-205ENST00000438362 RELNP78509 3460 aa4.22□□□□□ -1.73
CSDE1-205ENST00000438362 LOC101927531A0A1B0GV80 90 aa4.22□□□□□ -1.73
CSDE1-205ENST00000438362 A0A1B0GVX0 72 aa4.21□□□□□ -1.74
CSDE1-205ENST00000438362 IGKV2D-30A0A075B6S6 120 aa4.21□□□□□ -1.74
CSDE1-205ENST00000438362 IGKV2-30P06310 120 aa4.21□□□□□ -1.74
CSDE1-205ENST00000438362 LAMA5O15230 3695 aa4.2□□□□□ -1.74
CSDE1-205ENST00000438362 CELSR2Q9HCU4 2923 aa4.2□□□□□ -1.74
CSDE1-205ENST00000438362 SPENQ96T58 3664 aaKnown RBP4.2□□□□□ -1.74
CSDE1-205ENST00000438362 CRYBG3Q68DQ2 2970 aa4.2□□□□□ -1.74
CSDE1-205ENST00000438362 FAM229BQ4G0N7 80 aa4.2□□□□□ -1.74
CSDE1-205ENST00000438362 APLNQ9ULZ1 77 aa4.2□□□□□ -1.74
CSDE1-205ENST00000438362 Q1T7F1 81 aa4.2□□□□□ -1.74
CSDE1-205ENST00000438362 ZNF861PO60384 105 aa4.19□□□□□ -1.74
CSDE1-205ENST00000438362 LINC00313P59037 77 aa4.19□□□□□ -1.74
CSDE1-205ENST00000438362 MXRA5Q9NR99 2828 aa4.19□□□□□ -1.74
CSDE1-205ENST00000438362 A0A1B0GU69 56 aa4.19□□□□□ -1.74
CSDE1-205ENST00000438362 LCE2CQ5TA81 110 aa4.19□□□□□ -1.74
CSDE1-205ENST00000438362 NBEAL1Q6ZS30 2694 aa4.19□□□□□ -1.74
CSDE1-205ENST00000438362 C8orf87E5RJ46 101 aa4.18□□□□□ -1.74
CSDE1-205ENST00000438362 SPINK1P00995 79 aa4.18□□□□□ -1.74
CSDE1-205ENST00000438362 A0A087WTM6 91 aa4.18□□□□□ -1.74
CSDE1-205ENST00000438362 SPACA4Q8TDM5 124 aa4.18□□□□□ -1.74
CSDE1-205ENST00000438362 NIPBLQ6KC79 2804 aaeCLIP4.18□□□□□ -1.749e-7■■□□□ 11.9
CSDE1-205ENST00000438362 FAM229AH3BQW9 127 aa4.17□□□□□ -1.74
CSDE1-205ENST00000438362 LORP23490 312 aaPredicted RBP4.17□□□□□ -1.74
CSDE1-205ENST00000438362 ANAPC11Q9NYG5 84 aa4.17□□□□□ -1.74
CSDE1-205ENST00000438362 KRTAP4-16G5E9R7 235 aaPredicted RBP4.17□□□□□ -1.74
CSDE1-205ENST00000438362 K7ERS5 55 aa4.17□□□□□ -1.74
CSDE1-205ENST00000438362 IGLV8-61A0A075B6I0 122 aa4.17□□□□□ -1.74
CSDE1-205ENST00000438362 PSORS1C2Q9UIG4 136 aa4.17□□□□□ -1.74
CSDE1-205ENST00000438362 BAHCC1Q9P281 2608 aa4.16□□□□□ -1.74
CSDE1-205ENST00000438362 SSBP3-AS1Q7Z2R9 100 aa4.16□□□□□ -1.74
CSDE1-205ENST00000438362 SPRR1BP22528 89 aa4.15□□□□□ -1.74
CSDE1-205ENST00000438362 C7orf65Q6ZTY9 151 aa4.15□□□□□ -1.74
CSDE1-205ENST00000438362 SMG1Q96Q15 3661 aaKnown RBP4.15□□□□□ -1.74
CSDE1-205ENST00000438362 NSD1Q96L73 2696 aaPredicted RBP4.15□□□□□ -1.75
CSDE1-205ENST00000438362 ATP11AUNQ6ZP68 121 aa4.15□□□□□ -1.75
CSDE1-205ENST00000438362 LINC00472Q9H8W2 130 aa4.14□□□□□ -1.75
CSDE1-205ENST00000438362 IGLV7-46A0A075B6I9 117 aa4.14□□□□□ -1.75
CSDE1-205ENST00000438362 MMP24-AS1A0A0U1RRL7 71 aa4.14□□□□□ -1.75
CSDE1-205ENST00000438362 KRTAP1-5Q9BYS1 174 aa4.13□□□□□ -1.75
CSDE1-205ENST00000438362 HIVEP1P15822 2718 aa4.13□□□□□ -1.75
CSDE1-205ENST00000438362 CSMD1Q96PZ7 3565 aa4.13□□□□□ -1.75
CSDE1-205ENST00000438362 IGLV7-43P04211 117 aa4.13□□□□□ -1.75
CSDE1-205ENST00000438362 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP4.13□□□□□ -1.75
CSDE1-205ENST00000438362 Q8N9P0 234 aaPredicted RBP4.12□□□□□ -1.75
CSDE1-205ENST00000438362 TYMSOSQ8TAI1 123 aa4.11□□□□□ -1.75
CSDE1-205ENST00000438362 ZCCHC13Q8WW36 166 aaKnown RBP4.1□□□□□ -1.75
CSDE1-205ENST00000438362 PRR26Q8N8Z3 221 aa4.1□□□□□ -1.75
CSDE1-205ENST00000438362 Q96NJ1 140 aa4.1□□□□□ -1.75
CSDE1-205ENST00000438362 CDC42SE1Q9NRR8 79 aa4.1□□□□□ -1.75
CSDE1-205ENST00000438362 KTN1-AS1Q86SY8 53 aa4.09□□□□□ -1.75
CSDE1-205ENST00000438362 CD164Q04900 197 aa4.09□□□□□ -1.75
CSDE1-205ENST00000438362 UQCR11O14957 56 aa4.09□□□□□ -1.76
CSDE1-205ENST00000438362 CELSR1Q9NYQ6 3014 aa4.08□□□□□ -1.76
CSDE1-205ENST00000438362 KRTAP29-1A8MX34 341 aaPredicted RBP4.08□□□□□ -1.76
CSDE1-205ENST00000438362 PLA2G1BP04054 148 aaKnown RBP4.08□□□□□ -1.76
CSDE1-205ENST00000438362 Q75L30 129 aa4.08□□□□□ -1.76
CSDE1-205ENST00000438362 KRTAP7-1Q8IUC3 87 aa4.08□□□□□ -1.76
CSDE1-205ENST00000438362 Q5VV11 94 aa4.07□□□□□ -1.76
CSDE1-205ENST00000438362 STAB2Q8WWQ8 2551 aa4.07□□□□□ -1.76
CSDE1-205ENST00000438362 LCE6AA0A183 80 aa4.06□□□□□ -1.76
CSDE1-205ENST00000438362 LINC01558Q9Y6Z2 57 aa4.06□□□□□ -1.76
CSDE1-205ENST00000438362 MIR22HGQ0VDD5 57 aa4.05□□□□□ -1.76
CSDE1-205ENST00000438362 PLAC8Q9NZF1 115 aa4.05□□□□□ -1.76
CSDE1-205ENST00000438362 WWC2-AS2Q96NR7 200 aa4.05□□□□□ -1.76
CSDE1-205ENST00000438362 HRES1P13985 223 aa4.04□□□□□ -1.76
CSDE1-205ENST00000438362 PANO1I0J062 215 aa4.03□□□□□ -1.76
CSDE1-205ENST00000438362 SVEP1Q4LDE5 3571 aa4.03□□□□□ -1.77
CSDE1-205ENST00000438362 KRTAP11-1Q8IUC1 163 aa4.03□□□□□ -1.77
CSDE1-205ENST00000438362 LINC00304Q8N9R0 145 aa4.02□□□□□ -1.77
Retrieved 100 of 20,778 RNA–protein pairs in 54.5 ms