RNA–Protein interactions for RNA: ENST00000438107.1

FAM239A-202, Transcript of family with sequence similarity 239 member A, humanhuman

TSL 5 BASIC

Gene FAM239A, Length 2,155 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FAM239A-202ENST00000438107 SPRR1BP22528 89 aa12.07□□□□□ -0.48
FAM239A-202ENST00000438107 UBE2AP49459 152 aa12.07□□□□□ -0.48
FAM239A-202ENST00000438107 A0A087WSZ3 146 aa12.06□□□□□ -0.48
FAM239A-202ENST00000438107 IGLV2-33A0A075B6J2 118 aaPredicted RBP12.05□□□□□ -0.48
FAM239A-202ENST00000438107 FAM229BQ4G0N7 80 aa12.05□□□□□ -0.48
FAM239A-202ENST00000438107 MDFIQ99750 246 aa12.04□□□□□ -0.48
FAM239A-202ENST00000438107 UBE2DNLQ8IWF7 75 aa12.03□□□□□ -0.48
FAM239A-202ENST00000438107 COL7A1Q02388 2944 aa12.03□□□□□ -0.48
FAM239A-202ENST00000438107 LINC00336Q6ZUF6 198 aa12.02□□□□□ -0.48
FAM239A-202ENST00000438107 APLNQ9ULZ1 77 aa12.02□□□□□ -0.48
FAM239A-202ENST00000438107 PKIGQ9Y2B9 76 aa12.02□□□□□ -0.48
FAM239A-202ENST00000438107 PHF5AQ7RTV0 110 aaKnown RBP12.02□□□□□ -0.49
FAM239A-202ENST00000438107 STAB2Q8WWQ8 2551 aa12□□□□□ -0.49
FAM239A-202ENST00000438107 DEFB116Q30KQ4 102 aa12□□□□□ -0.49
FAM239A-202ENST00000438107 hDV103S1A0JD37 113 aa11.99□□□□□ -0.49
FAM239A-202ENST00000438107 KRTAP11-1Q8IUC1 163 aa11.99□□□□□ -0.49
FAM239A-202ENST00000438107 PRO0628Q9UI54 55 aa11.99□□□□□ -0.49
FAM239A-202ENST00000438107 CHTF8P0CG12 524 aa11.98□□□□□ -0.49
FAM239A-202ENST00000438107 C9orf163Q8N9P6 203 aa11.98□□□□□ -0.49
FAM239A-202ENST00000438107 KRTAP29-1A8MX34 341 aaPredicted RBP11.97□□□□□ -0.49
FAM239A-202ENST00000438107 WFDC13Q8IUB5 93 aa11.97□□□□□ -0.49
FAM239A-202ENST00000438107 NDUFB1O75438 58 aa11.96□□□□□ -0.5
FAM239A-202ENST00000438107 CYP4F30PQ9H0H9 118 aa11.95□□□□□ -0.5
FAM239A-202ENST00000438107 MP68P56378 58 aa11.95□□□□□ -0.5
FAM239A-202ENST00000438107 B9D2Q9BPU9 175 aa11.94□□□□□ -0.5
FAM239A-202ENST00000438107 RPL37AP61513 92 aaKnown RBP11.94□□□□□ -0.5
FAM239A-202ENST00000438107 MPLKIPQ8TAP9 179 aa11.94□□□□□ -0.5
FAM239A-202ENST00000438107 PRR15Q8IV56 129 aa11.93□□□□□ -0.5
FAM239A-202ENST00000438107 LRCOL1A6NCL2 159 aa11.92□□□□□ -0.5
FAM239A-202ENST00000438107 C1orf64Q8NEQ6 169 aa11.92□□□□□ -0.5
FAM239A-202ENST00000438107 LINC00472Q9H8W2 130 aa11.92□□□□□ -0.5
FAM239A-202ENST00000438107 A8MWP4 228 aa11.91□□□□□ -0.5
FAM239A-202ENST00000438107 DNAH9Q9NYC9 4486 aa11.9□□□□□ -0.5
FAM239A-202ENST00000438107 H3BPC8 53 aa11.9□□□□□ -0.5
FAM239A-202ENST00000438107 CASC2Q6XLA1 102 aa11.9□□□□□ -0.5
FAM239A-202ENST00000438107 DNAH10Q8IVF4 4471 aa11.9□□□□□ -0.5
FAM239A-202ENST00000438107 LYSTQ99698 3801 aa11.9□□□□□ -0.51
FAM239A-202ENST00000438107 TRAV22A0A0B4J277 110 aa11.88□□□□□ -0.51
FAM239A-202ENST00000438107 KRTAP13-1Q8IUC0 172 aa11.88□□□□□ -0.51
FAM239A-202ENST00000438107 NBDYA0A0U1RRE5 68 aa11.86□□□□□ -0.51
FAM239A-202ENST00000438107 Q1T7F1 81 aa11.84□□□□□ -0.51
FAM239A-202ENST00000438107 LINC00208Q96KT6 92 aa11.84□□□□□ -0.51
FAM239A-202ENST00000438107 H0Y9P7 68 aa11.83□□□□□ -0.52
FAM239A-202ENST00000438107 Q6ZRN7 208 aaPredicted RBP11.83□□□□□ -0.52
FAM239A-202ENST00000438107 DYNC2H1Q8NCM8 4307 aaKnown RBP11.83□□□□□ -0.52
FAM239A-202ENST00000438107 SPANXA2-OT1Q8N9U9 137 aa11.81□□□□□ -0.52
FAM239A-202ENST00000438107 TENM2Q9NT68 2774 aa11.8□□□□□ -0.52
FAM239A-202ENST00000438107 BRK1Q8WUW1 75 aa11.8□□□□□ -0.52
FAM239A-202ENST00000438107 CSMD3Q7Z407 3707 aa11.8□□□□□ -0.52
FAM239A-202ENST00000438107 PANO1I0J062 215 aa11.79□□□□□ -0.52
FAM239A-202ENST00000438107 NUPR2A6NF83 97 aa11.78□□□□□ -0.52
FAM239A-202ENST00000438107 MMP24-AS1A0A0U1RRL7 71 aa11.77□□□□□ -0.53
FAM239A-202ENST00000438107 PRR4Q16378 134 aa11.77□□□□□ -0.53
FAM239A-202ENST00000438107 SPACA4Q8TDM5 124 aa11.77□□□□□ -0.53
FAM239A-202ENST00000438107 LINC00483Q53H64 154 aa11.74□□□□□ -0.53
FAM239A-202ENST00000438107 DNAH7Q8WXX0 4024 aa11.73□□□□□ -0.53
FAM239A-202ENST00000438107 Q96NJ1 140 aa11.72□□□□□ -0.53
FAM239A-202ENST00000438107 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP11.72□□□□□ -0.53
FAM239A-202ENST00000438107 ASB16-AS1Q495Z4 193 aa11.7□□□□□ -0.54
FAM239A-202ENST00000438107 V9GYY9 64 aa11.7□□□□□ -0.54
FAM239A-202ENST00000438107 IGLV9-49A0A0B4J1Y8 123 aa11.69□□□□□ -0.54
FAM239A-202ENST00000438107 ZNF706Q9Y5V0 76 aaPredicted RBP11.69□□□□□ -0.54
FAM239A-202ENST00000438107 MOBPQ13875 183 aa11.69□□□□□ -0.54
FAM239A-202ENST00000438107 PLECQ15149 4684 aaKnown RBP11.68□□□□□ -0.54
FAM239A-202ENST00000438107 TP53AIP1Q9HCN2 124 aa11.67□□□□□ -0.54
FAM239A-202ENST00000438107 PRKDCP78527 4128 aaKnown RBP11.67□□□□□ -0.54
FAM239A-202ENST00000438107 MEGF8Q7Z7M0 2845 aa11.65□□□□□ -0.54
FAM239A-202ENST00000438107 A0A087WTM6 91 aa11.65□□□□□ -0.54
FAM239A-202ENST00000438107 SRRM2Q9UQ35 2752 aaKnown RBP11.63□□□□□ -0.55
FAM239A-202ENST00000438107 C8orf17Q9NRJ1 99 aa11.63□□□□□ -0.55
FAM239A-202ENST00000438107 WWC2-AS2Q96NR7 200 aa11.62□□□□□ -0.55
FAM239A-202ENST00000438107 IGLV5-52A0A0A0MRZ9 124 aa11.61□□□□□ -0.55
FAM239A-202ENST00000438107 DNHD1Q96M86 4753 aa11.6□□□□□ -0.55
FAM239A-202ENST00000438107 IGLV7-46A0A075B6I9 117 aa11.6□□□□□ -0.55
FAM239A-202ENST00000438107 PSPHP1O15172 72 aa11.59□□□□□ -0.55
FAM239A-202ENST00000438107 PSORS1C2Q9UIG4 136 aa11.59□□□□□ -0.55
FAM239A-202ENST00000438107 A0A1B0GVX0 72 aa11.58□□□□□ -0.56
FAM239A-202ENST00000438107 Q6ZR54 194 aa11.58□□□□□ -0.56
FAM239A-202ENST00000438107 RTL8CO15255 209 aa11.58□□□□□ -0.56
FAM239A-202ENST00000438107 STARD9Q9P2P6 4700 aa11.57□□□□□ -0.56
FAM239A-202ENST00000438107 C1orf195Q5TG92 126 aa11.57□□□□□ -0.56
FAM239A-202ENST00000438107 PLAC8Q9NZF1 115 aa11.57□□□□□ -0.56
FAM239A-202ENST00000438107 ZNF861PO60384 105 aa11.56□□□□□ -0.56
FAM239A-202ENST00000438107 CDK2AP2O75956 126 aa11.54□□□□□ -0.56
FAM239A-202ENST00000438107 LIMD2Q9BT23 127 aa11.54□□□□□ -0.56
FAM239A-202ENST00000438107 Q8N9P0 234 aaPredicted RBP11.54□□□□□ -0.56
FAM239A-202ENST00000438107 A8MUN3 132 aa11.53□□□□□ -0.56
FAM239A-202ENST00000438107 IGHV6-1A0A0B4J1U7 121 aa11.52□□□□□ -0.56
FAM239A-202ENST00000438107 VPS13DQ5THJ4 4388 aa11.52□□□□□ -0.56
FAM239A-202ENST00000438107 MRPL34Q9BQ48 92 aaKnown RBP11.51□□□□□ -0.57
FAM239A-202ENST00000438107 COA5Q86WW8 74 aa11.5□□□□□ -0.57
FAM239A-202ENST00000438107 Q5VV11 94 aa11.49□□□□□ -0.57
FAM239A-202ENST00000438107 PCOTHQ58A44 107 aa11.48□□□□□ -0.57
FAM239A-202ENST00000438107 NDUFS5O43920 106 aa11.47□□□□□ -0.57
FAM239A-202ENST00000438107 CD164Q04900 197 aa11.47□□□□□ -0.57
FAM239A-202ENST00000438107 ANAPC11Q9NYG5 84 aa11.46□□□□□ -0.57
FAM239A-202ENST00000438107 HECTD4Q9Y4D8 3996 aa11.41□□□□□ -0.58
FAM239A-202ENST00000438107 IGLV7-43P04211 117 aa11.41□□□□□ -0.58
FAM239A-202ENST00000438107 DNAH17Q9UFH2 4485 aa11.4□□□□□ -0.58
FAM239A-202ENST00000438107 A0A087X002 238 aa11.4□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 91.3 ms