RNA–Protein interactions for RNA: ENST00000438066.1

SPEN-202, Transcript of spen family transcriptional repressor, humanhuman

TSL 3

Gene SPEN, Length 1,733 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPEN-202ENST00000438066 M0R378 163 aa3.85□□□□□ -1.79
SPEN-202ENST00000438066 FAM19A5Q7Z5A7 132 aaPredicted RBP3.85□□□□□ -1.79
SPEN-202ENST00000438066 Q8N814 137 aa3.85□□□□□ -1.79
SPEN-202ENST00000438066 NBDYA0A0U1RRE5 68 aa3.84□□□□□ -1.79
SPEN-202ENST00000438066 CNBPP62633 177 aaKnown RBP3.84□□□□□ -1.79
SPEN-202ENST00000438066 LINC00575Q6W349 94 aa3.84□□□□□ -1.79
SPEN-202ENST00000438066 Q6ZRN7 208 aaPredicted RBP3.84□□□□□ -1.79
SPEN-202ENST00000438066 TRBV7-6A0A0J9YX20 115 aa3.84□□□□□ -1.8
SPEN-202ENST00000438066 ZNF73O43830 326 aaPredicted RBP3.84□□□□□ -1.8
SPEN-202ENST00000438066 DIRC1Q969H9 104 aa3.84□□□□□ -1.8
SPEN-202ENST00000438066 OBSCN-AS1Q96MR7 158 aa3.84□□□□□ -1.8
SPEN-202ENST00000438066 LOC107984640A0A0U1RRK4 108 aa3.83□□□□□ -1.8
SPEN-202ENST00000438066 ELOF1P60002 83 aaKnown RBP3.83□□□□□ -1.8
SPEN-202ENST00000438066 ORMDL1Q9P0S3 153 aa3.83□□□□□ -1.8
SPEN-202ENST00000438066 LRCOL1A6NCL2 159 aa3.82□□□□□ -1.8
SPEN-202ENST00000438066 PSCAO43653 123 aa3.82□□□□□ -1.8
SPEN-202ENST00000438066 KCNQ1DNQ9H478 68 aa3.82□□□□□ -1.8
SPEN-202ENST00000438066 hADV29S1A0JD25 119 aa3.81□□□□□ -1.8
SPEN-202ENST00000438066 INAFM2P0DMQ5 153 aa3.81□□□□□ -1.8
SPEN-202ENST00000438066 C16orf90A8MZG2 172 aa3.81□□□□□ -1.8
SPEN-202ENST00000438066 SNCGO76070 127 aa3.81□□□□□ -1.8
SPEN-202ENST00000438066 KRTAP1-4P0C5Y4 121 aa3.81□□□□□ -1.8
SPEN-202ENST00000438066 COX7BP24311 80 aa3.81□□□□□ -1.8
SPEN-202ENST00000438066 Q5W150 140 aa3.81□□□□□ -1.8
SPEN-202ENST00000438066 A0A096LNI7 61 aa3.8□□□□□ -1.8
SPEN-202ENST00000438066 TMEM256-PLSCR3K7ERE1 68 aa3.8□□□□□ -1.8
SPEN-202ENST00000438066 MP68P56378 58 aa3.8□□□□□ -1.8
SPEN-202ENST00000438066 Q6ZQY7 126 aa3.8□□□□□ -1.8
SPEN-202ENST00000438066 SIGMAR1Q99720 223 aa3.8□□□□□ -1.8
SPEN-202ENST00000438066 SPRR1AP35321 89 aa3.79□□□□□ -1.8
SPEN-202ENST00000438066 SDIM1Q6ZPB5 146 aa3.79□□□□□ -1.8
SPEN-202ENST00000438066 C14orf132Q9NPU4 83 aa3.79□□□□□ -1.8
SPEN-202ENST00000438066 C3orf84H3BNL1 204 aa3.78□□□□□ -1.8
SPEN-202ENST00000438066 MT-ATP8P03928 68 aa3.78□□□□□ -1.8
SPEN-202ENST00000438066 ACYP1P07311 99 aa3.78□□□□□ -1.8
SPEN-202ENST00000438066 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP3.78□□□□□ -1.8
SPEN-202ENST00000438066 C9orf163Q8N9P6 203 aa3.78□□□□□ -1.8
SPEN-202ENST00000438066 JMJD7-PLA2G4BH0Y9G9 81 aa3.78□□□□□ -1.8
SPEN-202ENST00000438066 H3BQ85 93 aa3.78□□□□□ -1.8
SPEN-202ENST00000438066 M0R2N4 97 aa3.78□□□□□ -1.8
SPEN-202ENST00000438066 Q6ZRX8 168 aa3.78□□□□□ -1.8
SPEN-202ENST00000438066 KMT2AQ03164 3969 aa3.78□□□□□ -1.8
SPEN-202ENST00000438066 IGKV2-24A0A0C4DH68 120 aa3.77□□□□□ -1.81
SPEN-202ENST00000438066 A0A087WTM6 91 aa3.76□□□□□ -1.81
SPEN-202ENST00000438066 A0A1W2PNN7 141 aa3.76□□□□□ -1.81
SPEN-202ENST00000438066 SMCR5Q8TEV8 140 aa3.76□□□□□ -1.81
SPEN-202ENST00000438066 Q9BRP9 147 aa3.76□□□□□ -1.81
SPEN-202ENST00000438066 PKIGQ9Y2B9 76 aa3.76□□□□□ -1.81
SPEN-202ENST00000438066 DNAH6Q9C0G6 4158 aa3.76□□□□□ -1.81
SPEN-202ENST00000438066 DNAH2Q9P225 4427 aa3.76□□□□□ -1.81
SPEN-202ENST00000438066 LOC110117498A0A087WWA1 95 aa3.75□□□□□ -1.81
SPEN-202ENST00000438066 A0A1B0GV72 72 aa3.75□□□□□ -1.81
SPEN-202ENST00000438066 CCKP06307 115 aa3.75□□□□□ -1.81
SPEN-202ENST00000438066 SCGB1A1P11684 91 aa3.75□□□□□ -1.81
SPEN-202ENST00000438066 LINC00483Q53H64 154 aa3.75□□□□□ -1.81
SPEN-202ENST00000438066 ANAPC11Q9NYG5 84 aa3.75□□□□□ -1.81
SPEN-202ENST00000438066 HECTD4Q9Y4D8 3996 aa3.75□□□□□ -1.81
SPEN-202ENST00000438066 ETDCA0A1B0GVM5 59 aa3.75□□□□□ -1.81
SPEN-202ENST00000438066 SRRM2Q9UQ35 2752 aaKnown RBP3.75□□□□□ -1.81
SPEN-202ENST00000438066 ALMS1Q8TCU4 4167 aa3.74□□□□□ -1.81
SPEN-202ENST00000438066 TRBV7-4A0A0J9YYF1 115 aa3.74□□□□□ -1.81
SPEN-202ENST00000438066 RBM3P98179 157 aaKnown RBP3.74□□□□□ -1.81
SPEN-202ENST00000438066 Q6ZQT0 140 aa3.74□□□□□ -1.81
SPEN-202ENST00000438066 LINC00474Q9P2X8 69 aa3.74□□□□□ -1.81
SPEN-202ENST00000438066 LAMTOR3Q9UHA4 124 aa3.74□□□□□ -1.81
SPEN-202ENST00000438066 IGLV5-48A0A075B6I7 105 aa3.73□□□□□ -1.81
SPEN-202ENST00000438066 TRBV7-7A0A0K0K1E9 115 aa3.73□□□□□ -1.81
SPEN-202ENST00000438066 C1orf195Q5TG92 126 aa3.73□□□□□ -1.81
SPEN-202ENST00000438066 LINC00643Q86TS7 51 aa3.73□□□□□ -1.81
SPEN-202ENST00000438066 SPACA4Q8TDM5 124 aa3.73□□□□□ -1.81
SPEN-202ENST00000438066 LINC00846Q9NV44 126 aa3.73□□□□□ -1.81
SPEN-202ENST00000438066 DNAH17Q9UFH2 4485 aa3.73□□□□□ -1.81
SPEN-202ENST00000438066 LY6G6CO95867 125 aa3.73□□□□□ -1.81
SPEN-202ENST00000438066 PDE6GP18545 87 aa3.73□□□□□ -1.81
SPEN-202ENST00000438066 C1orf134Q5TEV5 83 aa3.73□□□□□ -1.81
SPEN-202ENST00000438066 Q6Q795 121 aa3.73□□□□□ -1.81
SPEN-202ENST00000438066 KRTAP11-1Q8IUC1 163 aa3.73□□□□□ -1.81
SPEN-202ENST00000438066 RTL8CO15255 209 aa3.72□□□□□ -1.81
SPEN-202ENST00000438066 ERC2-IT1O76042 136 aa3.72□□□□□ -1.81
SPEN-202ENST00000438066 PHF5AQ7RTV0 110 aaKnown RBP3.72□□□□□ -1.81
SPEN-202ENST00000438066 Q8N9L7 120 aa3.72□□□□□ -1.81
SPEN-202ENST00000438066 DSCR8Q96T75 97 aa3.72□□□□□ -1.81
SPEN-202ENST00000438066 SPANXA2-OT1Q8N9U9 137 aa3.71□□□□□ -1.82
SPEN-202ENST00000438066 FRAS1Q86XX4 4008 aa3.7□□□□□ -1.82
SPEN-202ENST00000438066 UBE2BP63146 152 aa3.7□□□□□ -1.82
SPEN-202ENST00000438066 PRLHP81277 87 aa3.7□□□□□ -1.82
SPEN-202ENST00000438066 Q6JHZ5 121 aa3.7□□□□□ -1.82
SPEN-202ENST00000438066 ST20-AS1Q8NBB2 130 aa3.7□□□□□ -1.82
SPEN-202ENST00000438066 IMUPQ9GZP8 106 aa3.7□□□□□ -1.82
SPEN-202ENST00000438066 FUSP35637 526 aaKnown RBP eCLIP3.7□□□□□ -1.82
SPEN-202ENST00000438066 DEFB105AQ8NG35 78 aa3.7□□□□□ -1.82
SPEN-202ENST00000438066 A8MU10 97 aa3.69□□□□□ -1.82
SPEN-202ENST00000438066 KRTAP10-12P60413 245 aa3.69□□□□□ -1.82
SPEN-202ENST00000438066 KRTAP13-1Q8IUC0 172 aa3.69□□□□□ -1.82
SPEN-202ENST00000438066 C3orf22Q8N5N4 141 aa3.69□□□□□ -1.82
SPEN-202ENST00000438066 K7ERS5 55 aa3.68□□□□□ -1.82
SPEN-202ENST00000438066 ATP5EP2Q5VTU8 51 aa3.68□□□□□ -1.82
SPEN-202ENST00000438066 PLAC8Q9NZF1 115 aa3.68□□□□□ -1.82
SPEN-202ENST00000438066 BCE1O60756 84 aa3.67□□□□□ -1.82
SPEN-202ENST00000438066 LCE3CQ5T5A8 94 aa3.67□□□□□ -1.82
Retrieved 100 of 20,778 RNA–protein pairs in 40 ms