RNA–Protein interactions for RNA: ENST00000436638.5

ECHDC1-208, Transcript of ethylmalonyl-CoA decarboxylase 1, humanhuman

APPRIS ALT2 TSL 3

Gene ECHDC1, Length 766 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC1-208ENST00000436638 RETNLBQ9BQ08 111 aa4.01□□□□□ -1.77
ECHDC1-208ENST00000436638 TOMM7Q9P0U1 55 aa4.01□□□□□ -1.77
ECHDC1-208ENST00000436638 PRO1854Q9UHT4 67 aa4.01□□□□□ -1.77
ECHDC1-208ENST00000436638 SACSQ9NZJ4 4579 aa4.01□□□□□ -1.77
ECHDC1-208ENST00000436638 CSMD3Q7Z407 3707 aa4□□□□□ -1.77
ECHDC1-208ENST00000436638 DNAH6Q9C0G6 4158 aa4□□□□□ -1.77
ECHDC1-208ENST00000436638 IGHV3-64A0A075B6Q5 118 aa4□□□□□ -1.77
ECHDC1-208ENST00000436638 GVQW2A0A096LPI5 108 aaPredicted RBP4□□□□□ -1.77
ECHDC1-208ENST00000436638 C11orf86A6NJI1 115 aa4□□□□□ -1.77
ECHDC1-208ENST00000436638 C16orf90A8MZG2 172 aa4□□□□□ -1.77
ECHDC1-208ENST00000436638 F8WEM9 126 aa4□□□□□ -1.77
ECHDC1-208ENST00000436638 PLNP26678 52 aa4□□□□□ -1.77
ECHDC1-208ENST00000436638 LCE1AQ5T7P2 110 aa4□□□□□ -1.77
ECHDC1-208ENST00000436638 C15orf56Q8N910 161 aa4□□□□□ -1.77
ECHDC1-208ENST00000436638 CAMK2N2Q96S95 79 aa4□□□□□ -1.77
ECHDC1-208ENST00000436638 CDKN2A-AS1Q9UH64 79 aa4□□□□□ -1.77
ECHDC1-208ENST00000436638 IGLV4-69A0A075B6H9 119 aa3.99□□□□□ -1.77
ECHDC1-208ENST00000436638 A0A1B0GVY2 172 aa3.99□□□□□ -1.77
ECHDC1-208ENST00000436638 NDUFA1O15239 70 aa3.99□□□□□ -1.77
ECHDC1-208ENST00000436638 ZNF22P17026 224 aaPredicted RBP3.99□□□□□ -1.77
ECHDC1-208ENST00000436638 SPTSSBQ8NFR3 76 aa3.99□□□□□ -1.77
ECHDC1-208ENST00000436638 TTTY13Q9BZ97 58 aa3.99□□□□□ -1.77
ECHDC1-208ENST00000436638 TRBV10-3A0A0K0K1G6 114 aa3.98□□□□□ -1.77
ECHDC1-208ENST00000436638 TMEM223A0PJW6 202 aa3.98□□□□□ -1.77
ECHDC1-208ENST00000436638 SMIM1B2RUZ4 78 aa3.98□□□□□ -1.77
ECHDC1-208ENST00000436638 COX7B2Q8TF08 81 aa3.98□□□□□ -1.77
ECHDC1-208ENST00000436638 KMT2CQ8NEZ4 4911 aaKnown RBP3.98□□□□□ -1.77
ECHDC1-208ENST00000436638 KRTAP29-1A8MX34 341 aaPredicted RBP3.97□□□□□ -1.77
ECHDC1-208ENST00000436638 HCG22E2RYF7 251 aa3.97□□□□□ -1.77
ECHDC1-208ENST00000436638 TSPEAR-AS2P59090 65 aa3.97□□□□□ -1.77
ECHDC1-208ENST00000436638 CNBPP62633 177 aaKnown RBP3.97□□□□□ -1.77
ECHDC1-208ENST00000436638 REG3GQ6UW15 175 aa3.97□□□□□ -1.77
ECHDC1-208ENST00000436638 Q8IZM0 81 aa3.97□□□□□ -1.77
ECHDC1-208ENST00000436638 C9orf163Q8N9P6 203 aa3.97□□□□□ -1.77
ECHDC1-208ENST00000436638 SMCR5Q8TEV8 140 aa3.97□□□□□ -1.77
ECHDC1-208ENST00000436638 IGKV2D-30A0A075B6S6 120 aa3.96□□□□□ -1.78
ECHDC1-208ENST00000436638 hDV103S1A0JD37 113 aa3.96□□□□□ -1.78
ECHDC1-208ENST00000436638 ZNF815PA8K554 130 aa3.96□□□□□ -1.78
ECHDC1-208ENST00000436638 ERC2-IT1O76042 136 aa3.96□□□□□ -1.78
ECHDC1-208ENST00000436638 COX6CP09669 75 aa3.96□□□□□ -1.78
ECHDC1-208ENST00000436638 FAM229BQ4G0N7 80 aa3.96□□□□□ -1.78
ECHDC1-208ENST00000436638 SFTA2Q6UW10 78 aa3.96□□□□□ -1.78
ECHDC1-208ENST00000436638 UNQ6190/PRO20217Q6UXQ8 127 aa3.96□□□□□ -1.78
ECHDC1-208ENST00000436638 CDC42SE1Q9NRR8 79 aa3.96□□□□□ -1.78
ECHDC1-208ENST00000436638 TRAV22A0A0B4J277 110 aa3.95□□□□□ -1.78
ECHDC1-208ENST00000436638 TRBV30A0A0K0K1B3 111 aa3.95□□□□□ -1.78
ECHDC1-208ENST00000436638 C9orf116Q5BN46 136 aaPredicted RBP3.95□□□□□ -1.78
ECHDC1-208ENST00000436638 LIMD2Q9BT23 127 aa3.95□□□□□ -1.78
ECHDC1-208ENST00000436638 RYR3Q15413 4870 aa3.95□□□□□ -1.78
ECHDC1-208ENST00000436638 IGLV5-37A0A075B6J1 123 aa3.94□□□□□ -1.78
ECHDC1-208ENST00000436638 Q6ZRP5 223 aa3.94□□□□□ -1.78
ECHDC1-208ENST00000436638 C6orf48Q9UBA6 75 aa3.94□□□□□ -1.78
ECHDC1-208ENST00000436638 KMT2AQ03164 3969 aa3.94□□□□□ -1.78
ECHDC1-208ENST00000436638 IGKV2-24A0A0C4DH68 120 aa3.93□□□□□ -1.78
ECHDC1-208ENST00000436638 K7ERS5 55 aa3.93□□□□□ -1.78
ECHDC1-208ENST00000436638 KRTAP10-1P60331 282 aa3.93□□□□□ -1.78
ECHDC1-208ENST00000436638 CASC2Q6XLA1 102 aa3.93□□□□□ -1.78
ECHDC1-208ENST00000436638 ZNF625Q96I27 306 aaPredicted RBP3.93□□□□□ -1.78
ECHDC1-208ENST00000436638 LYSTQ99698 3801 aa3.93□□□□□ -1.78
ECHDC1-208ENST00000436638 IGKV2D-26A0A0A0MRZ7 120 aa3.92□□□□□ -1.78
ECHDC1-208ENST00000436638 TLX1NBP0CAT3 122 aa3.92□□□□□ -1.78
ECHDC1-208ENST00000436638 LINC00158P58513 81 aa3.92□□□□□ -1.78
ECHDC1-208ENST00000436638 PRR4Q16378 134 aa3.92□□□□□ -1.78
ECHDC1-208ENST00000436638 A0A096LNI7 61 aa3.91□□□□□ -1.78
ECHDC1-208ENST00000436638 RPL37AP8A6NKH3 93 aa3.91□□□□□ -1.78
ECHDC1-208ENST00000436638 CHKB-CPT1BH3BT56 60 aa3.91□□□□□ -1.78
ECHDC1-208ENST00000436638 CFC1BP0CG36 223 aa3.91□□□□□ -1.78
ECHDC1-208ENST00000436638 CFC1P0CG37 223 aa3.91□□□□□ -1.78
ECHDC1-208ENST00000436638 Q5VV11 94 aa3.91□□□□□ -1.78
ECHDC1-208ENST00000436638 DNAH17Q9UFH2 4485 aa3.91□□□□□ -1.78
ECHDC1-208ENST00000436638 COX17Q14061 63 aa3.9□□□□□ -1.79
ECHDC1-208ENST00000436638 OCR1Q9BZK8 76 aa3.9□□□□□ -1.79
ECHDC1-208ENST00000436638 DNAH10Q8IVF4 4471 aa3.9□□□□□ -1.79
ECHDC1-208ENST00000436638 A0A087WYN8 130 aa3.89□□□□□ -1.79
ECHDC1-208ENST00000436638 KRTAP4-16G5E9R7 235 aaPredicted RBP3.89□□□□□ -1.79
ECHDC1-208ENST00000436638 DNAL4O96015 105 aa3.89□□□□□ -1.79
ECHDC1-208ENST00000436638 Q6ZSA8 131 aa3.89□□□□□ -1.79
ECHDC1-208ENST00000436638 SPACA4Q8TDM5 124 aa3.89□□□□□ -1.79
ECHDC1-208ENST00000436638 PRAC1Q96KF2 57 aa3.89□□□□□ -1.79
ECHDC1-208ENST00000436638 DNAH2Q9P225 4427 aa3.89□□□□□ -1.79
ECHDC1-208ENST00000436638 A0A0J9YXY3 114 aa3.88□□□□□ -1.79
ECHDC1-208ENST00000436638 HAMPP81172 84 aa3.88□□□□□ -1.79
ECHDC1-208ENST00000436638 LUZP6Q538Z0 58 aa3.88□□□□□ -1.79
ECHDC1-208ENST00000436638 MIR7-3HGQ8N6C7 128 aa3.88□□□□□ -1.79
ECHDC1-208ENST00000436638 CIRBP-AS1Q8TBR5 109 aa3.88□□□□□ -1.79
ECHDC1-208ENST00000436638 C7orf33Q8WU49 177 aa3.88□□□□□ -1.79
ECHDC1-208ENST00000436638 C8orf17Q9NRJ1 99 aa3.88□□□□□ -1.79
ECHDC1-208ENST00000436638 A6NED7 52 aa3.87□□□□□ -1.79
ECHDC1-208ENST00000436638 PANO1I0J062 215 aa3.87□□□□□ -1.79
ECHDC1-208ENST00000436638 MOBPQ13875 183 aa3.87□□□□□ -1.79
ECHDC1-208ENST00000436638 Q1RN00 199 aa3.87□□□□□ -1.79
ECHDC1-208ENST00000436638 PLAC8Q9NZF1 115 aa3.87□□□□□ -1.79
ECHDC1-208ENST00000436638 IGKV3D-7A0A0C4DH55 119 aa3.86□□□□□ -1.79
ECHDC1-208ENST00000436638 A0A1W2PNN7 141 aa3.86□□□□□ -1.79
ECHDC1-208ENST00000436638 RPL28P46779 137 aaKnown RBP3.86□□□□□ -1.79
ECHDC1-208ENST00000436638 C9orf129Q5T035 196 aaKnown RBP3.86□□□□□ -1.79
ECHDC1-208ENST00000436638 FRAS1Q86XX4 4008 aa3.85□□□□□ -1.79
ECHDC1-208ENST00000436638 FAM168BA1KXE4 195 aa3.85□□□□□ -1.79
ECHDC1-208ENST00000436638 SMR3BP02814 79 aaPredicted RBP3.85□□□□□ -1.79
ECHDC1-208ENST00000436638 ROMO1P60602 79 aa3.85□□□□□ -1.79
Retrieved 100 of 20,778 RNA–protein pairs in 48.4 ms