RNA–Protein interactions for RNA: ENST00000436638.5

ECHDC1-208, Transcript of ethylmalonyl-CoA decarboxylase 1, human

APPRIS ALT2 TSL 3

Gene ECHDC1, Length 766 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
ECHDC1-208	ENST00000436638	RETNLB	Q9BQ08	111 aa		4.01	□□□□□ -1.77
ECHDC1-208	ENST00000436638	TOMM7	Q9P0U1	55 aa		4.01	□□□□□ -1.77
ECHDC1-208	ENST00000436638	PRO1854	Q9UHT4	67 aa		4.01	□□□□□ -1.77
ECHDC1-208	ENST00000436638	SACS	Q9NZJ4	4579 aa		4.01	□□□□□ -1.77
ECHDC1-208	ENST00000436638	CSMD3	Q7Z407	3707 aa		4	□□□□□ -1.77
ECHDC1-208	ENST00000436638	DNAH6	Q9C0G6	4158 aa		4	□□□□□ -1.77
ECHDC1-208	ENST00000436638	IGHV3-64	A0A075B6Q5	118 aa		4	□□□□□ -1.77
ECHDC1-208	ENST00000436638	GVQW2	A0A096LPI5	108 aa	Predicted RBP	4	□□□□□ -1.77
ECHDC1-208	ENST00000436638	C11orf86	A6NJI1	115 aa		4	□□□□□ -1.77
ECHDC1-208	ENST00000436638	C16orf90	A8MZG2	172 aa		4	□□□□□ -1.77
ECHDC1-208	ENST00000436638		F8WEM9	126 aa		4	□□□□□ -1.77
ECHDC1-208	ENST00000436638	PLN	P26678	52 aa		4	□□□□□ -1.77
ECHDC1-208	ENST00000436638	LCE1A	Q5T7P2	110 aa		4	□□□□□ -1.77
ECHDC1-208	ENST00000436638	C15orf56	Q8N910	161 aa		4	□□□□□ -1.77
ECHDC1-208	ENST00000436638	CAMK2N2	Q96S95	79 aa		4	□□□□□ -1.77
ECHDC1-208	ENST00000436638	CDKN2A-AS1	Q9UH64	79 aa		4	□□□□□ -1.77
ECHDC1-208	ENST00000436638	IGLV4-69	A0A075B6H9	119 aa		3.99	□□□□□ -1.77
ECHDC1-208	ENST00000436638		A0A1B0GVY2	172 aa		3.99	□□□□□ -1.77
ECHDC1-208	ENST00000436638	NDUFA1	O15239	70 aa		3.99	□□□□□ -1.77
ECHDC1-208	ENST00000436638	ZNF22	P17026	224 aa	Predicted RBP	3.99	□□□□□ -1.77
ECHDC1-208	ENST00000436638	SPTSSB	Q8NFR3	76 aa		3.99	□□□□□ -1.77
ECHDC1-208	ENST00000436638	TTTY13	Q9BZ97	58 aa		3.99	□□□□□ -1.77
ECHDC1-208	ENST00000436638	TRBV10-3	A0A0K0K1G6	114 aa		3.98	□□□□□ -1.77
ECHDC1-208	ENST00000436638	TMEM223	A0PJW6	202 aa		3.98	□□□□□ -1.77
ECHDC1-208	ENST00000436638	SMIM1	B2RUZ4	78 aa		3.98	□□□□□ -1.77
ECHDC1-208	ENST00000436638	COX7B2	Q8TF08	81 aa		3.98	□□□□□ -1.77
ECHDC1-208	ENST00000436638	KMT2C	Q8NEZ4	4911 aa	Known RBP	3.98	□□□□□ -1.77
ECHDC1-208	ENST00000436638	KRTAP29-1	A8MX34	341 aa	Predicted RBP	3.97	□□□□□ -1.77
ECHDC1-208	ENST00000436638	HCG22	E2RYF7	251 aa		3.97	□□□□□ -1.77
ECHDC1-208	ENST00000436638	TSPEAR-AS2	P59090	65 aa		3.97	□□□□□ -1.77
ECHDC1-208	ENST00000436638	CNBP	P62633	177 aa	Known RBP	3.97	□□□□□ -1.77
ECHDC1-208	ENST00000436638	REG3G	Q6UW15	175 aa		3.97	□□□□□ -1.77
ECHDC1-208	ENST00000436638		Q8IZM0	81 aa		3.97	□□□□□ -1.77
ECHDC1-208	ENST00000436638	C9orf163	Q8N9P6	203 aa		3.97	□□□□□ -1.77
ECHDC1-208	ENST00000436638	SMCR5	Q8TEV8	140 aa		3.97	□□□□□ -1.77
ECHDC1-208	ENST00000436638	IGKV2D-30	A0A075B6S6	120 aa		3.96	□□□□□ -1.78
ECHDC1-208	ENST00000436638	hDV103S1	A0JD37	113 aa		3.96	□□□□□ -1.78
ECHDC1-208	ENST00000436638	ZNF815P	A8K554	130 aa		3.96	□□□□□ -1.78
ECHDC1-208	ENST00000436638	ERC2-IT1	O76042	136 aa		3.96	□□□□□ -1.78
ECHDC1-208	ENST00000436638	COX6C	P09669	75 aa		3.96	□□□□□ -1.78
ECHDC1-208	ENST00000436638	FAM229B	Q4G0N7	80 aa		3.96	□□□□□ -1.78
ECHDC1-208	ENST00000436638	SFTA2	Q6UW10	78 aa		3.96	□□□□□ -1.78
ECHDC1-208	ENST00000436638	UNQ6190/PRO20217	Q6UXQ8	127 aa		3.96	□□□□□ -1.78
ECHDC1-208	ENST00000436638	CDC42SE1	Q9NRR8	79 aa		3.96	□□□□□ -1.78
ECHDC1-208	ENST00000436638	TRAV22	A0A0B4J277	110 aa		3.95	□□□□□ -1.78
ECHDC1-208	ENST00000436638	TRBV30	A0A0K0K1B3	111 aa		3.95	□□□□□ -1.78
ECHDC1-208	ENST00000436638	C9orf116	Q5BN46	136 aa	Predicted RBP	3.95	□□□□□ -1.78
ECHDC1-208	ENST00000436638	LIMD2	Q9BT23	127 aa		3.95	□□□□□ -1.78
ECHDC1-208	ENST00000436638	RYR3	Q15413	4870 aa		3.95	□□□□□ -1.78
ECHDC1-208	ENST00000436638	IGLV5-37	A0A075B6J1	123 aa		3.94	□□□□□ -1.78
ECHDC1-208	ENST00000436638		Q6ZRP5	223 aa		3.94	□□□□□ -1.78
ECHDC1-208	ENST00000436638	C6orf48	Q9UBA6	75 aa		3.94	□□□□□ -1.78
ECHDC1-208	ENST00000436638	KMT2A	Q03164	3969 aa		3.94	□□□□□ -1.78
ECHDC1-208	ENST00000436638	IGKV2-24	A0A0C4DH68	120 aa		3.93	□□□□□ -1.78
ECHDC1-208	ENST00000436638		K7ERS5	55 aa		3.93	□□□□□ -1.78
ECHDC1-208	ENST00000436638	KRTAP10-1	P60331	282 aa		3.93	□□□□□ -1.78
ECHDC1-208	ENST00000436638	CASC2	Q6XLA1	102 aa		3.93	□□□□□ -1.78
ECHDC1-208	ENST00000436638	ZNF625	Q96I27	306 aa	Predicted RBP	3.93	□□□□□ -1.78
ECHDC1-208	ENST00000436638	LYST	Q99698	3801 aa		3.93	□□□□□ -1.78
ECHDC1-208	ENST00000436638	IGKV2D-26	A0A0A0MRZ7	120 aa		3.92	□□□□□ -1.78
ECHDC1-208	ENST00000436638	TLX1NB	P0CAT3	122 aa		3.92	□□□□□ -1.78
ECHDC1-208	ENST00000436638	LINC00158	P58513	81 aa		3.92	□□□□□ -1.78
ECHDC1-208	ENST00000436638	PRR4	Q16378	134 aa		3.92	□□□□□ -1.78
ECHDC1-208	ENST00000436638		A0A096LNI7	61 aa		3.91	□□□□□ -1.78
ECHDC1-208	ENST00000436638	RPL37AP8	A6NKH3	93 aa		3.91	□□□□□ -1.78
ECHDC1-208	ENST00000436638	CHKB-CPT1B	H3BT56	60 aa		3.91	□□□□□ -1.78
ECHDC1-208	ENST00000436638	CFC1B	P0CG36	223 aa		3.91	□□□□□ -1.78
ECHDC1-208	ENST00000436638	CFC1	P0CG37	223 aa		3.91	□□□□□ -1.78
ECHDC1-208	ENST00000436638		Q5VV11	94 aa		3.91	□□□□□ -1.78
ECHDC1-208	ENST00000436638	DNAH17	Q9UFH2	4485 aa		3.91	□□□□□ -1.78
ECHDC1-208	ENST00000436638	COX17	Q14061	63 aa		3.9	□□□□□ -1.79
ECHDC1-208	ENST00000436638	OCR1	Q9BZK8	76 aa		3.9	□□□□□ -1.79
ECHDC1-208	ENST00000436638	DNAH10	Q8IVF4	4471 aa		3.9	□□□□□ -1.79
ECHDC1-208	ENST00000436638		A0A087WYN8	130 aa		3.89	□□□□□ -1.79
ECHDC1-208	ENST00000436638	KRTAP4-16	G5E9R7	235 aa	Predicted RBP	3.89	□□□□□ -1.79
ECHDC1-208	ENST00000436638	DNAL4	O96015	105 aa		3.89	□□□□□ -1.79
ECHDC1-208	ENST00000436638		Q6ZSA8	131 aa		3.89	□□□□□ -1.79
ECHDC1-208	ENST00000436638	SPACA4	Q8TDM5	124 aa		3.89	□□□□□ -1.79
ECHDC1-208	ENST00000436638	PRAC1	Q96KF2	57 aa		3.89	□□□□□ -1.79
ECHDC1-208	ENST00000436638	DNAH2	Q9P225	4427 aa		3.89	□□□□□ -1.79
ECHDC1-208	ENST00000436638		A0A0J9YXY3	114 aa		3.88	□□□□□ -1.79
ECHDC1-208	ENST00000436638	HAMP	P81172	84 aa		3.88	□□□□□ -1.79
ECHDC1-208	ENST00000436638	LUZP6	Q538Z0	58 aa		3.88	□□□□□ -1.79
ECHDC1-208	ENST00000436638	MIR7-3HG	Q8N6C7	128 aa		3.88	□□□□□ -1.79
ECHDC1-208	ENST00000436638	CIRBP-AS1	Q8TBR5	109 aa		3.88	□□□□□ -1.79
ECHDC1-208	ENST00000436638	C7orf33	Q8WU49	177 aa		3.88	□□□□□ -1.79
ECHDC1-208	ENST00000436638	C8orf17	Q9NRJ1	99 aa		3.88	□□□□□ -1.79
ECHDC1-208	ENST00000436638		A6NED7	52 aa		3.87	□□□□□ -1.79
ECHDC1-208	ENST00000436638	PANO1	I0J062	215 aa		3.87	□□□□□ -1.79
ECHDC1-208	ENST00000436638	MOBP	Q13875	183 aa		3.87	□□□□□ -1.79
ECHDC1-208	ENST00000436638		Q1RN00	199 aa		3.87	□□□□□ -1.79
ECHDC1-208	ENST00000436638	PLAC8	Q9NZF1	115 aa		3.87	□□□□□ -1.79
ECHDC1-208	ENST00000436638	IGKV3D-7	A0A0C4DH55	119 aa		3.86	□□□□□ -1.79
ECHDC1-208	ENST00000436638		A0A1W2PNN7	141 aa		3.86	□□□□□ -1.79
ECHDC1-208	ENST00000436638	RPL28	P46779	137 aa	Known RBP	3.86	□□□□□ -1.79
ECHDC1-208	ENST00000436638	C9orf129	Q5T035	196 aa	Known RBP	3.86	□□□□□ -1.79
ECHDC1-208	ENST00000436638	FRAS1	Q86XX4	4008 aa		3.85	□□□□□ -1.79
ECHDC1-208	ENST00000436638	FAM168B	A1KXE4	195 aa		3.85	□□□□□ -1.79
ECHDC1-208	ENST00000436638	SMR3B	P02814	79 aa	Predicted RBP	3.85	□□□□□ -1.79
ECHDC1-208	ENST00000436638	ROMO1	P60602	79 aa		3.85	□□□□□ -1.79

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