RNA–Protein interactions for RNA: ENST00000434734.1

HMGB3P10-201, Transcript of high mobility group box 3 pseudogene 10, humanhuman

BASIC

Gene HMGB3P10, Length 572 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P10-201ENST00000434734 DEFB109BQ30KR1 87 aa1.4□□□□□ -2.19
HMGB3P10-201ENST00000434734 NFAT5O94916 1531 aa1.4□□□□□ -2.19
HMGB3P10-201ENST00000434734 BDP1A6H8Y1 2624 aa1.37□□□□□ -2.19
HMGB3P10-201ENST00000434734 TRPM2O94759 1503 aa1.36□□□□□ -2.19
HMGB3P10-201ENST00000434734 IGF2RP11717 2491 aa1.35□□□□□ -2.19
HMGB3P10-201ENST00000434734 NCOR1O75376 2440 aa1.35□□□□□ -2.19
HMGB3P10-201ENST00000434734 PCNX1Q96RV3 2341 aa1.34□□□□□ -2.19
HMGB3P10-201ENST00000434734 DSPP15924 2871 aaKnown RBP1.34□□□□□ -2.2
HMGB3P10-201ENST00000434734 ABCA2Q9BZC7 2435 aa1.34□□□□□ -2.2
HMGB3P10-201ENST00000434734 WT1-ASQ06250 92 aa1.33□□□□□ -2.2
HMGB3P10-201ENST00000434734 FBN2P35556 2912 aa1.33□□□□□ -2.2
HMGB3P10-201ENST00000434734 TPRP12270 2363 aaKnown RBP1.33□□□□□ -2.2
HMGB3P10-201ENST00000434734 ATP7AQ04656 1500 aa1.32□□□□□ -2.2
HMGB3P10-201ENST00000434734 CSPG4Q6UVK1 2322 aa1.32□□□□□ -2.2
HMGB3P10-201ENST00000434734 KRTAP2-3P0C7H8 128 aa1.31□□□□□ -2.2
HMGB3P10-201ENST00000434734 KRTAP19-3Q7Z4W3 81 aa1.31□□□□□ -2.2
HMGB3P10-201ENST00000434734 SMIM2Q9BVW6 85 aa1.31□□□□□ -2.2
HMGB3P10-201ENST00000434734 KRTAP2-4Q9BYR9 128 aa1.31□□□□□ -2.2
HMGB3P10-201ENST00000434734 KRTAP2-1Q9BYU5 128 aa1.31□□□□□ -2.2
HMGB3P10-201ENST00000434734 CSMD3Q7Z407 3707 aa1.31□□□□□ -2.2
HMGB3P10-201ENST00000434734 SPINK6Q6UWN8 80 aa1.3□□□□□ -2.2
HMGB3P10-201ENST00000434734 KIF21BO75037 1637 aa1.29□□□□□ -2.2
HMGB3P10-201ENST00000434734 FRAS1Q86XX4 4008 aa1.29□□□□□ -2.2
HMGB3P10-201ENST00000434734 SMR3AQ99954 134 aa1.29□□□□□ -2.2
HMGB3P10-201ENST00000434734 PIEZO1Q92508 2521 aa1.29□□□□□ -2.2
HMGB3P10-201ENST00000434734 VWFP04275 2813 aa1.28□□□□□ -2.2
HMGB3P10-201ENST00000434734 S4R3F8 94 aa1.28□□□□□ -2.2
HMGB3P10-201ENST00000434734 ATRQ13535 2644 aa1.28□□□□□ -2.2
HMGB3P10-201ENST00000434734 CRCT1Q9UGL9 99 aa1.27□□□□□ -2.21
HMGB3P10-201ENST00000434734 CHD6Q8TD26 2715 aa1.26□□□□□ -2.21
HMGB3P10-201ENST00000434734 TRANK1O15050 2925 aa1.26□□□□□ -2.21
HMGB3P10-201ENST00000434734 ANK2Q01484 3957 aa1.25□□□□□ -2.21
HMGB3P10-201ENST00000434734 HMCN1Q96RW7 5635 aa1.25□□□□□ -2.21
HMGB3P10-201ENST00000434734 WFDC10BQ8IUB3 73 aa1.25□□□□□ -2.21
HMGB3P10-201ENST00000434734 KAAG1Q9UBP8 84 aa1.25□□□□□ -2.21
HMGB3P10-201ENST00000434734 SAMD9LQ8IVG5 1584 aa1.25□□□□□ -2.21
HMGB3P10-201ENST00000434734 SPTA1P02549 2419 aa1.25□□□□□ -2.21
HMGB3P10-201ENST00000434734 PRLHP81277 87 aa1.23□□□□□ -2.21
HMGB3P10-201ENST00000434734 APCP25054 2843 aa1.22□□□□□ -2.21
HMGB3P10-201ENST00000434734 TENM4Q6N022 2769 aa1.22□□□□□ -2.21
HMGB3P10-201ENST00000434734 DEFB106AQ8N104 65 aa1.22□□□□□ -2.21
HMGB3P10-201ENST00000434734 NDUFA1O15239 70 aa1.21□□□□□ -2.22
HMGB3P10-201ENST00000434734 BSNQ9UPA5 3926 aa1.19□□□□□ -2.22
HMGB3P10-201ENST00000434734 KRTAP4-1Q9BYQ7 146 aa1.18□□□□□ -2.22
HMGB3P10-201ENST00000434734 CELSR1Q9NYQ6 3014 aa1.17□□□□□ -2.22
HMGB3P10-201ENST00000434734 H3BUA1 57 aa1.17□□□□□ -2.22
HMGB3P10-201ENST00000434734 SPINK1P00995 79 aa1.17□□□□□ -2.22
HMGB3P10-201ENST00000434734 FBN3Q75N90 2809 aa1.15□□□□□ -2.23
HMGB3P10-201ENST00000434734 CHD8Q9HCK8 2581 aa1.14□□□□□ -2.23
HMGB3P10-201ENST00000434734 ZNF469Q96JG9 3925 aaPredicted RBP1.14□□□□□ -2.23
HMGB3P10-201ENST00000434734 SNRPGP62308 76 aaKnown RBP1.14□□□□□ -2.23
HMGB3P10-201ENST00000434734 DEFB135Q30KP9 77 aa1.14□□□□□ -2.23
HMGB3P10-201ENST00000434734 CLTCL1P53675 1640 aa1.14□□□□□ -2.23
HMGB3P10-201ENST00000434734 PRRC2CQ9Y520 2896 aaKnown RBP1.13□□□□□ -2.23
HMGB3P10-201ENST00000434734 M0R2T5 61 aa1.12□□□□□ -2.23
HMGB3P10-201ENST00000434734 U3KQA8 63 aa1.12□□□□□ -2.23
HMGB3P10-201ENST00000434734 EP300Q09472 2414 aaPredicted RBP1.11□□□□□ -2.23
HMGB3P10-201ENST00000434734 CEP290O15078 2479 aa1.11□□□□□ -2.23
HMGB3P10-201ENST00000434734 FAT2Q9NYQ8 4349 aa1.11□□□□□ -2.23
HMGB3P10-201ENST00000434734 AKAP13Q12802 2813 aa1.1□□□□□ -2.23
HMGB3P10-201ENST00000434734 PRM1P04553 51 aa1.1□□□□□ -2.23
HMGB3P10-201ENST00000434734 FCGBPQ9Y6R7 5405 aaPredicted RBP1.09□□□□□ -2.23
HMGB3P10-201ENST00000434734 MMP24-AS1A0A0U1RRL7 71 aa1.09□□□□□ -2.23
HMGB3P10-201ENST00000434734 OTOGQ6ZRI0 2925 aa1.09□□□□□ -2.23
HMGB3P10-201ENST00000434734 HECTD1Q9ULT8 2610 aa1.09□□□□□ -2.24
HMGB3P10-201ENST00000434734 NBASA2RRP1 2371 aa1.08□□□□□ -2.24
HMGB3P10-201ENST00000434734 PKD1L2Q7Z442 2459 aa1.08□□□□□ -2.24
HMGB3P10-201ENST00000434734 IGLV5-48A0A075B6I7 105 aa1.08□□□□□ -2.24
HMGB3P10-201ENST00000434734 TENM1Q9UKZ4 2725 aa1.07□□□□□ -2.24
HMGB3P10-201ENST00000434734 TNXBP22105 4242 aa1.07□□□□□ -2.24
HMGB3P10-201ENST00000434734 NOTCH1P46531 2555 aa1.06□□□□□ -2.24
HMGB3P10-201ENST00000434734 DUOX1Q9NRD9 1551 aa1.06□□□□□ -2.24
HMGB3P10-201ENST00000434734 H0YGG7 62 aa1.06□□□□□ -2.24
HMGB3P10-201ENST00000434734 PRKDCP78527 4128 aaKnown RBP1.06□□□□□ -2.24
HMGB3P10-201ENST00000434734 TNRC18O15417 2968 aaPredicted RBP1.05□□□□□ -2.24
HMGB3P10-201ENST00000434734 ZFYVE26Q68DK2 2539 aa1.05□□□□□ -2.24
HMGB3P10-201ENST00000434734 CREBBPQ92793 2442 aa1.04□□□□□ -2.24
HMGB3P10-201ENST00000434734 UNC79Q9P2D8 2635 aa1.03□□□□□ -2.24
HMGB3P10-201ENST00000434734 DEFB131AP59861 70 aa1.02□□□□□ -2.25
HMGB3P10-201ENST00000434734 MROH2BQ7Z745 1585 aa1.02□□□□□ -2.25
HMGB3P10-201ENST00000434734 PKD1L1Q8TDX9 2849 aa1.02□□□□□ -2.25
HMGB3P10-201ENST00000434734 WNK1Q9H4A3 2382 aa1□□□□□ -2.25
HMGB3P10-201ENST00000434734 NOP10Q9NPE3 64 aaKnown RBP1□□□□□ -2.25
HMGB3P10-201ENST00000434734 UBR5O95071 2799 aaPredicted RBP0.99□□□□□ -2.25
HMGB3P10-201ENST00000434734 LYSTQ99698 3801 aa0.99□□□□□ -2.25
HMGB3P10-201ENST00000434734 SRRM2Q9UQ35 2752 aaKnown RBP0.97□□□□□ -2.25
HMGB3P10-201ENST00000434734 SYNE1Q8NF91 8797 aaKnown RBP0.96□□□□□ -2.25
HMGB3P10-201ENST00000434734 MAP1BP46821 2468 aaKnown RBP0.96□□□□□ -2.26
HMGB3P10-201ENST00000434734 GCC2Q8IWJ2 1684 aa0.96□□□□□ -2.26
HMGB3P10-201ENST00000434734 HUWE1Q7Z6Z7 4374 aaKnown RBP0.95□□□□□ -2.26
HMGB3P10-201ENST00000434734 PTPN13Q12923 2485 aa0.95□□□□□ -2.26
HMGB3P10-201ENST00000434734 HIVEP3Q5T1R4 2406 aa0.95□□□□□ -2.26
HMGB3P10-201ENST00000434734 ACANP16112 2415 aa0.94□□□□□ -2.26
HMGB3P10-201ENST00000434734 RPL39P62891 51 aaKnown RBP0.93□□□□□ -2.26
HMGB3P10-201ENST00000434734 APC2O95996 2303 aa0.93□□□□□ -2.26
HMGB3P10-201ENST00000434734 A0A0C4DFX4 3053 aa0.92□□□□□ -2.26
HMGB3P10-201ENST00000434734 KRTAP21-1Q3LI58 79 aa0.92□□□□□ -2.26
HMGB3P10-201ENST00000434734 M0QY20 66 aa0.91□□□□□ -2.26
HMGB3P10-201ENST00000434734 POLR2KP53803 58 aaKnown RBP0.91□□□□□ -2.26
HMGB3P10-201ENST00000434734 PDZD2O15018 2839 aa0.89□□□□□ -2.27
Retrieved 100 of 20,778 RNA–protein pairs in 53.9 ms