RNA–Protein interactions for RNA: ENST00000434407.6

HLA-F-220, Transcript of major histocompatibility complex, class I, F, humanhuman

BASIC

Gene HLA-F, Length 884 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-F-220ENST00000434407 A0A1B0GV90 55 aa10.6□□□□□ -0.71
HLA-F-220ENST00000434407 SSBP3-AS1Q7Z2R9 100 aa10.6□□□□□ -0.71
HLA-F-220ENST00000434407 Q8NBF4 154 aa10.6□□□□□ -0.71
HLA-F-220ENST00000434407 Q1RN00 199 aa10.59□□□□□ -0.71
HLA-F-220ENST00000434407 NAA38Q9BRA0 125 aaKnown RBP10.59□□□□□ -0.71
HLA-F-220ENST00000434407 UBR4Q5T4S7 5183 aa10.58□□□□□ -0.72
HLA-F-220ENST00000434407 IGLV9-49A0A0B4J1Y8 123 aa10.58□□□□□ -0.72
HLA-F-220ENST00000434407 MOBPQ13875 183 aa10.58□□□□□ -0.72
HLA-F-220ENST00000434407 LPAP08519 4548 aa10.57□□□□□ -0.72
HLA-F-220ENST00000434407 A0A1W2PPM0 123 aa10.56□□□□□ -0.72
HLA-F-220ENST00000434407 PSMB2P49721 201 aa10.56□□□□□ -0.72
HLA-F-220ENST00000434407 LINC01547P58512 204 aaPredicted RBP10.56□□□□□ -0.72
HLA-F-220ENST00000434407 VAMP3Q15836 100 aa10.56□□□□□ -0.72
HLA-F-220ENST00000434407 IGLV5-48A0A075B6I7 105 aa10.55□□□□□ -0.72
HLA-F-220ENST00000434407 FABP2P12104 132 aa10.55□□□□□ -0.72
HLA-F-220ENST00000434407 TEX49A0A1B0GTD5 131 aa10.54□□□□□ -0.72
HLA-F-220ENST00000434407 SCGB1C2P0DMR2 95 aa10.54□□□□□ -0.72
HLA-F-220ENST00000434407 LINC00575Q6W349 94 aa10.54□□□□□ -0.72
HLA-F-220ENST00000434407 PRR4Q16378 134 aa10.53□□□□□ -0.72
HLA-F-220ENST00000434407 KRTAP9-9Q9BYP9 154 aa10.53□□□□□ -0.72
HLA-F-220ENST00000434407 KRTAP9-4Q9BYQ2 154 aa10.53□□□□□ -0.72
HLA-F-220ENST00000434407 SPINK1P00995 79 aa10.52□□□□□ -0.73
HLA-F-220ENST00000434407 LYRM7Q5U5X0 104 aa10.52□□□□□ -0.73
HLA-F-220ENST00000434407 COX6CP09669 75 aa10.51□□□□□ -0.73
HLA-F-220ENST00000434407 LAMTOR3Q9UHA4 124 aa10.51□□□□□ -0.73
HLA-F-220ENST00000434407 TRIAP1O43715 76 aa10.5□□□□□ -0.73
HLA-F-220ENST00000434407 SLC25A20O43772 301 aa10.5□□□□□ -0.73
HLA-F-220ENST00000434407 RPS29P62273 56 aaKnown RBP10.5□□□□□ -0.73
HLA-F-220ENST00000434407 C9orf153Q5TBE3 101 aa10.5□□□□□ -0.73
HLA-F-220ENST00000434407 SMIM29Q86T20 159 aa10.5□□□□□ -0.73
HLA-F-220ENST00000434407 KRTAP19-1Q8IUB9 90 aa10.5□□□□□ -0.73
HLA-F-220ENST00000434407 DEFB105AQ8NG35 78 aa10.5□□□□□ -0.73
HLA-F-220ENST00000434407 SPCS1Q9Y6A9 102 aa10.49□□□□□ -0.73
HLA-F-220ENST00000434407 hADV29S1A0JD25 119 aa10.48□□□□□ -0.73
HLA-F-220ENST00000434407 Q8N377 158 aa10.48□□□□□ -0.73
HLA-F-220ENST00000434407 RETNLBQ9BQ08 111 aa10.48□□□□□ -0.73
HLA-F-220ENST00000434407 GTF2H5Q6ZYL4 71 aa10.47□□□□□ -0.73
HLA-F-220ENST00000434407 K7EP34 96 aa10.46□□□□□ -0.73
HLA-F-220ENST00000434407 TRBV20-1A0A075B6N2 111 aa10.45□□□□□ -0.74
HLA-F-220ENST00000434407 Q6ZQY7 126 aa10.44□□□□□ -0.74
HLA-F-220ENST00000434407 H0YGX0 51 aa10.43□□□□□ -0.74
HLA-F-220ENST00000434407 UBE2V1Q13404 147 aa10.43□□□□□ -0.74
HLA-F-220ENST00000434407 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP10.43□□□□□ -0.74
HLA-F-220ENST00000434407 TCL1BO95988 128 aa10.42□□□□□ -0.74
HLA-F-220ENST00000434407 FP248Q71RG6 208 aaPredicted RBP10.41□□□□□ -0.74
HLA-F-220ENST00000434407 KRTAP4-8A0A0G2JLE6 195 aa10.4□□□□□ -0.74
HLA-F-220ENST00000434407 ATXN8Q156A1 80 aa10.4□□□□□ -0.74
HLA-F-220ENST00000434407 IGLV7-46A0A075B6I9 117 aa10.39□□□□□ -0.75
HLA-F-220ENST00000434407 CD164Q04900 197 aa10.39□□□□□ -0.75
HLA-F-220ENST00000434407 CLEC2BQ92478 149 aa10.39□□□□□ -0.75
HLA-F-220ENST00000434407 H3BMG7 143 aa10.38□□□□□ -0.75
HLA-F-220ENST00000434407 PPDPFLQ8WWR9 84 aa10.38□□□□□ -0.75
HLA-F-220ENST00000434407 FAM218AQ96MZ4 157 aa10.38□□□□□ -0.75
HLA-F-220ENST00000434407 TPRXLQ17RH7 258 aa10.37□□□□□ -0.75
HLA-F-220ENST00000434407 LST1O00453 97 aa10.36□□□□□ -0.75
HLA-F-220ENST00000434407 IGLV8-61A0A075B6I0 122 aa10.35□□□□□ -0.75
HLA-F-220ENST00000434407 A0A1B0GX51 115 aa10.35□□□□□ -0.75
HLA-F-220ENST00000434407 RNF213Q63HN8 5207 aa10.33□□□□□ -0.76
HLA-F-220ENST00000434407 SNCGO76070 127 aa10.33□□□□□ -0.76
HLA-F-220ENST00000434407 OCIAD2Q56VL3 154 aa10.33□□□□□ -0.76
HLA-F-220ENST00000434407 HRCT1Q6UXD1 115 aa10.33□□□□□ -0.76
HLA-F-220ENST00000434407 F8WEM9 126 aa10.32□□□□□ -0.76
HLA-F-220ENST00000434407 TRACP01848 142 aa10.32□□□□□ -0.76
HLA-F-220ENST00000434407 LIMD2Q9BT23 127 aa10.32□□□□□ -0.76
HLA-F-220ENST00000434407 A0A0G2JQZ4 141 aa10.31□□□□□ -0.76
HLA-F-220ENST00000434407 Q5XG85 94 aa10.31□□□□□ -0.76
HLA-F-220ENST00000434407 F8W1H4 67 aa10.3□□□□□ -0.76
HLA-F-220ENST00000434407 C9JAW5 83 aa10.29□□□□□ -0.76
HLA-F-220ENST00000434407 Q6JHZ5 121 aa10.29□□□□□ -0.76
HLA-F-220ENST00000434407 KRTAP13-3Q3SY46 172 aa10.28□□□□□ -0.76
HLA-F-220ENST00000434407 DNAL4O96015 105 aa10.27□□□□□ -0.77
HLA-F-220ENST00000434407 PRO0461Q9UI25 63 aa10.27□□□□□ -0.77
HLA-F-220ENST00000434407 MTURNQ8N3F0 131 aa10.26□□□□□ -0.77
HLA-F-220ENST00000434407 IGFL1Q6UW32 110 aa10.25□□□□□ -0.77
HLA-F-220ENST00000434407 CDIP1Q9H305 208 aa10.24□□□□□ -0.77
HLA-F-220ENST00000434407 GHRHP01286 108 aa10.23□□□□□ -0.77
HLA-F-220ENST00000434407 BAALC-AS2P0C853 105 aa10.23□□□□□ -0.77
HLA-F-220ENST00000434407 ANKRD29Q8N6D5 301 aa10.22□□□□□ -0.77
HLA-F-220ENST00000434407 H3BT86 120 aa10.21□□□□□ -0.77
HLA-F-220ENST00000434407 NDUFV3P56181 108 aaKnown RBP10.21□□□□□ -0.77
HLA-F-220ENST00000434407 ORMDL1Q9P0S3 153 aa10.21□□□□□ -0.77
HLA-F-220ENST00000434407 MUC17Q685J3 4493 aa10.2□□□□□ -0.78
HLA-F-220ENST00000434407 C1orf195Q5TG92 126 aa10.19□□□□□ -0.78
HLA-F-220ENST00000434407 TRBV7-7A0A0K0K1E9 115 aa10.18□□□□□ -0.78
HLA-F-220ENST00000434407 H3BQ85 93 aa10.18□□□□□ -0.78
HLA-F-220ENST00000434407 ASB16-AS1Q495Z4 193 aa10.16□□□□□ -0.78
HLA-F-220ENST00000434407 Q6Q795 121 aa10.16□□□□□ -0.78
HLA-F-220ENST00000434407 MUC2Q02817 5179 aa10.15□□□□□ -0.78
HLA-F-220ENST00000434407 TMEM256-PLSCR3K7ERE1 68 aa10.15□□□□□ -0.78
HLA-F-220ENST00000434407 ETDBQ3ZM63 59 aa10.14□□□□□ -0.79
HLA-F-220ENST00000434407 TEN1Q86WV5 123 aa10.12□□□□□ -0.79
HLA-F-220ENST00000434407 LCE1DQ5T752 114 aa10.07□□□□□ -0.8
HLA-F-220ENST00000434407 KRTAP4-7Q9BYR0 210 aa10.06□□□□□ -0.8
HLA-F-220ENST00000434407 A0A1W2PNM2 257 aa10.05□□□□□ -0.8
HLA-F-220ENST00000434407 JMJD7-PLA2G4BH0Y9G9 81 aa10.03□□□□□ -0.8
HLA-F-220ENST00000434407 SS18L2Q9UHA2 77 aa10.03□□□□□ -0.8
HLA-F-220ENST00000434407 C9orf92A6NGG3 77 aa10.02□□□□□ -0.81
HLA-F-220ENST00000434407 OBSCN-AS1Q96MR7 158 aa10.02□□□□□ -0.81
HLA-F-220ENST00000434407 A0A087WSZ3 146 aa10□□□□□ -0.81
HLA-F-220ENST00000434407 TRBV7-4A0A0J9YYF1 115 aa10□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 73 ms